| Chain sequence(s) |
A: AAQLTQSPSSLSASVGDRVTITCRASQDISSALVWYQQKPGKAPKLLIYDASSLESGVPSRFSGSESGTDTTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVTLQEKDGGVCQPGRSLRLSCAQSGFTFSTYGMEWVPQAPGKGLEWVAVIWDDGSYKYKGDSVKGRFTISRDNSKNTLYLQMNSLRATDTAYYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23)
[INFO] Main: Simulation completed successfully. (00:03:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0585 | |
| 2 | A | A | 0.0000 | |
| 3 | Q | A | -1.1983 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | -0.0709 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.2395 | |
| 8 | P | A | -0.1921 | |
| 9 | S | A | -0.2636 | |
| 10 | S | A | -0.3293 | |
| 11 | L | A | 0.1947 | |
| 12 | S | A | -0.5291 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | 0.1612 | |
| 15 | V | A | 1.1755 | |
| 16 | G | A | -0.3518 | |
| 17 | D | A | -1.2131 | |
| 18 | R | A | -2.0001 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.0643 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.0196 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -1.8908 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.4126 | |
| 27 | Q | A | -1.3464 | |
| 28 | D | A | -1.6716 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.0363 | |
| 31 | S | A | -0.1065 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -0.4918 | |
| 40 | P | A | -0.4269 | |
| 41 | G | A | -0.8356 | |
| 42 | K | A | -1.7862 | |
| 43 | A | A | -0.3032 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.1991 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.2294 | |
| 50 | D | A | -0.2551 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.2119 | |
| 53 | S | A | 0.0023 | |
| 54 | L | A | 0.4687 | |
| 55 | E | A | -0.4321 | |
| 56 | S | A | -0.3925 | |
| 57 | G | A | -0.4674 | |
| 58 | V | A | 0.0934 | |
| 59 | P | A | -0.1379 | |
| 60 | S | A | -0.2980 | |
| 61 | R | A | -0.3647 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.1414 | |
| 64 | G | A | -0.1518 | |
| 65 | S | A | -0.3684 | |
| 66 | E | A | -0.8547 | |
| 67 | S | A | -0.4452 | |
| 68 | G | A | -0.5094 | |
| 69 | T | A | -0.1791 | |
| 70 | D | A | -0.6030 | |
| 71 | T | A | 0.0000 | |
| 72 | T | A | -0.0167 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.0241 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -0.3066 | |
| 77 | S | A | -0.1355 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.4254 | |
| 80 | P | A | -0.6586 | |
| 81 | E | A | -1.8668 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | 0.2780 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.1697 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | N | A | -0.3130 | |
| 93 | S | A | -0.2040 | |
| 94 | Y | A | 0.2199 | |
| 95 | P | A | 0.0114 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | 0.0303 | |
| 98 | F | A | 0.2020 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -0.4663 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.1821 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.3959 | |
| 106 | I | A | 0.5083 | |
| 107 | K | A | -1.6115 | |
| 108 | G | A | -0.8547 | |
| 109 | G | A | -0.6297 | |
| 110 | G | A | -0.6406 | |
| 111 | G | A | -0.5940 | |
| 112 | S | A | -0.3784 | |
| 113 | G | A | -0.5869 | |
| 114 | G | A | -0.6358 | |
| 115 | G | A | -0.6406 | |
| 116 | G | A | -0.5926 | |
| 117 | S | A | -0.3808 | |
| 118 | G | A | -0.6027 | |
| 119 | G | A | -0.6512 | |
| 120 | G | A | -0.6400 | |
| 121 | G | A | -0.5921 | |
| 122 | S | A | -0.5210 | |
| 123 | Q | A | -1.1893 | |
| 124 | V | A | -0.0171 | |
| 125 | T | A | 0.0101 | |
| 126 | L | A | 0.0000 | |
| 127 | Q | A | -0.7382 | |
| 128 | E | A | 0.0000 | |
| 129 | K | A | -1.3178 | |
| 130 | D | A | -2.0033 | |
| 131 | G | A | -0.5314 | |
| 132 | G | A | 0.1479 | |
| 133 | V | A | 1.7578 | |
| 134 | C | A | 0.3001 | |
| 135 | Q | A | -0.5767 | |
| 136 | P | A | -0.2640 | |
| 137 | G | A | -0.8450 | |
| 138 | R | A | -1.9590 | |
| 139 | S | A | -0.5331 | |
| 140 | L | A | -0.0843 | |
| 141 | R | A | -1.6415 | |
| 142 | L | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | C | A | 0.0000 | |
| 145 | A | A | 0.0168 | |
| 146 | Q | A | 0.0000 | |
| 147 | S | A | -0.2957 | |
| 148 | G | A | -0.4140 | |
| 149 | F | A | 0.1722 | |
| 150 | T | A | -0.0221 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -0.1282 | |
| 153 | T | A | -0.0291 | |
| 154 | Y | A | 0.2441 | |
| 155 | G | A | 0.0000 | |
| 156 | M | A | 0.0000 | |
| 157 | E | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | P | A | -0.0470 | |
| 161 | Q | A | -0.0561 | |
| 162 | A | A | -0.0526 | |
| 163 | P | A | -0.3068 | |
| 164 | G | A | -0.8413 | |
| 165 | K | A | -1.8156 | |
| 166 | G | A | -0.4442 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -1.6313 | |
| 169 | W | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | V | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | W | A | 0.5503 | |
| 175 | D | A | -0.7564 | |
| 176 | D | A | -1.9249 | |
| 177 | G | A | -0.5230 | |
| 178 | S | A | -0.1244 | |
| 179 | Y | A | 0.3714 | |
| 180 | K | A | -0.7767 | |
| 181 | Y | A | 0.3371 | |
| 182 | K | A | -0.2957 | |
| 183 | G | A | -0.4525 | |
| 184 | D | A | -2.0076 | |
| 185 | S | A | -0.5459 | |
| 186 | V | A | 0.0000 | |
| 187 | K | A | -1.9667 | |
| 188 | G | A | -0.8406 | |
| 189 | R | A | -0.4525 | |
| 190 | F | A | 0.0000 | |
| 191 | T | A | -0.0690 | |
| 192 | I | A | 0.0000 | |
| 193 | S | A | -0.1308 | |
| 194 | R | A | -0.3675 | |
| 195 | D | A | -0.9713 | |
| 196 | N | A | -0.9417 | |
| 197 | S | A | -0.6585 | |
| 198 | K | A | -1.8296 | |
| 199 | N | A | -0.8769 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | Y | A | 0.1490 | |
| 203 | L | A | 0.0000 | |
| 204 | Q | A | -0.5544 | |
| 205 | M | A | 0.0000 | |
| 206 | N | A | -0.6401 | |
| 207 | S | A | -0.3338 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -1.2693 | |
| 210 | A | A | -0.2005 | |
| 211 | T | A | -0.0603 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | -0.0167 | |
| 214 | A | A | 0.0000 | |
| 215 | Y | A | 0.7338 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | 0.0000 | |
| 221 | D | A | -0.2169 | |
| 222 | G | A | 0.0000 | |
| 223 | I | A | 1.5575 | |
| 224 | T | A | 0.4735 | |
| 225 | M | A | 1.1256 | |
| 226 | V | A | 0.0000 | |
| 227 | R | A | -1.9304 | |
| 228 | G | A | -0.5005 | |
| 229 | V | A | 1.7342 | |
| 230 | M | A | 1.4093 | |
| 231 | K | A | -0.1774 | |
| 232 | D | A | -0.2573 | |
| 233 | Y | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | -0.1415 | |
| 236 | Y | A | 0.5389 | |
| 237 | W | A | 0.2259 | |
| 238 | G | A | 0.0000 | |
| 239 | Q | A | -1.1983 | |
| 240 | G | A | 0.0000 | |
| 241 | T | A | 0.1717 | |
| 242 | L | A | 1.0376 | |
| 243 | V | A | 0.0000 | |
| 244 | T | A | 0.2067 | |
| 245 | V | A | 0.0000 | |
| 246 | S | A | -0.1604 | |
| 247 | S | A | -0.2344 |