Project name: 79_rank

Status: done

Started: 2026-05-18 11:37:28
Settings
Chain sequence(s) B: LSEREKRDRWYKMDILMFQLRHFRDNEMRFEETGEFPPGDPEEYLAEMEKQKKEVEEQYMQLMK
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:47)
Show buried residues

Minimal score value
-5.3108
Maximal score value
1.9489
Average score
-2.2876
Total score value
-146.4035

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L B -0.2239
2 S B -1.9279
3 E B -4.0139
4 R B -4.5387
5 E B -3.7790
6 K B -4.0965
7 R B -4.4547
8 D B -4.1741
9 R B -2.3148
10 W B -0.7703
11 Y B -0.2323
12 K B -0.7592
13 M B 0.0128
14 D B 0.3248
15 I B 1.9489
16 L B 0.1221
17 M B 0.5472
18 F B 0.6797
19 Q B -0.9505
20 L B -1.7159
21 R B -2.6317
22 H B -2.7363
23 F B -2.7566
24 R B -3.7252
25 D B -3.7111
26 N B -3.1006
27 E B -2.9941
28 M B -2.4416
29 R B -3.0751
30 F B -2.7723
31 E B -3.2515
32 E B -3.2677
33 T B -2.3144
34 G B -2.2901
35 E B -2.4575
36 F B -1.1689
37 P B -0.8018
38 P B -0.9666
39 G B -1.9214
40 D B -3.0655
41 P B -2.6230
42 E B -3.2539
43 E B -3.4111
44 Y B -2.2506
45 L B -1.9531
46 A B -2.4692
47 E B -3.4809
48 M B 0.0000
49 E B -3.6084
50 K B -4.3460
51 Q B -4.2855
52 K B -4.4894
53 K B -5.3108
54 E B -5.0375
55 V B 0.0000
56 E B -4.2013
57 E B -4.2849
58 Q B -2.9757
59 Y B -1.7395
60 M B -1.3390
61 Q B -1.9532
62 L B 0.0000
63 M B -0.1336
64 K B -1.4907
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Laboratory of Theory of Biopolymers 2018