| Chain sequence(s) |
B: LSEREKRDRWYKMDILMFQLRHFRDNEMRFEETGEFPPGDPEEYLAEMEKQKKEVEEQYMQLMK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:47)
[INFO] Main: Simulation completed successfully. (00:03:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | -0.2239 | |
| 2 | S | B | -1.9279 | |
| 3 | E | B | -4.0139 | |
| 4 | R | B | -4.5387 | |
| 5 | E | B | -3.7790 | |
| 6 | K | B | -4.0965 | |
| 7 | R | B | -4.4547 | |
| 8 | D | B | -4.1741 | |
| 9 | R | B | -2.3148 | |
| 10 | W | B | -0.7703 | |
| 11 | Y | B | -0.2323 | |
| 12 | K | B | -0.7592 | |
| 13 | M | B | 0.0128 | |
| 14 | D | B | 0.3248 | |
| 15 | I | B | 1.9489 | |
| 16 | L | B | 0.1221 | |
| 17 | M | B | 0.5472 | |
| 18 | F | B | 0.6797 | |
| 19 | Q | B | -0.9505 | |
| 20 | L | B | -1.7159 | |
| 21 | R | B | -2.6317 | |
| 22 | H | B | -2.7363 | |
| 23 | F | B | -2.7566 | |
| 24 | R | B | -3.7252 | |
| 25 | D | B | -3.7111 | |
| 26 | N | B | -3.1006 | |
| 27 | E | B | -2.9941 | |
| 28 | M | B | -2.4416 | |
| 29 | R | B | -3.0751 | |
| 30 | F | B | -2.7723 | |
| 31 | E | B | -3.2515 | |
| 32 | E | B | -3.2677 | |
| 33 | T | B | -2.3144 | |
| 34 | G | B | -2.2901 | |
| 35 | E | B | -2.4575 | |
| 36 | F | B | -1.1689 | |
| 37 | P | B | -0.8018 | |
| 38 | P | B | -0.9666 | |
| 39 | G | B | -1.9214 | |
| 40 | D | B | -3.0655 | |
| 41 | P | B | -2.6230 | |
| 42 | E | B | -3.2539 | |
| 43 | E | B | -3.4111 | |
| 44 | Y | B | -2.2506 | |
| 45 | L | B | -1.9531 | |
| 46 | A | B | -2.4692 | |
| 47 | E | B | -3.4809 | |
| 48 | M | B | 0.0000 | |
| 49 | E | B | -3.6084 | |
| 50 | K | B | -4.3460 | |
| 51 | Q | B | -4.2855 | |
| 52 | K | B | -4.4894 | |
| 53 | K | B | -5.3108 | |
| 54 | E | B | -5.0375 | |
| 55 | V | B | 0.0000 | |
| 56 | E | B | -4.2013 | |
| 57 | E | B | -4.2849 | |
| 58 | Q | B | -2.9757 | |
| 59 | Y | B | -1.7395 | |
| 60 | M | B | -1.3390 | |
| 61 | Q | B | -1.9532 | |
| 62 | L | B | 0.0000 | |
| 63 | M | B | -0.1336 | |
| 64 | K | B | -1.4907 |