| Chain sequence(s) |
H: EVQLLQFGGGLVQPGGSLRLSCVASGYTFSGYAMRWVRRAPGKGLEWVSSIGIGADTYYVDSVKGRFTISRDNSRNTLYLQMNGLRAEDTAIYYCVKCHHNNYYCNMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
L: EIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQILQTPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:02)
[INFO] Main: Simulation completed successfully. (00:02:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | L | -1.9245 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.9216 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3798 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1233 | |
| 8 | P | L | 0.4228 | |
| 9 | L | L | 1.1686 | |
| 10 | S | L | 0.5278 | |
| 11 | L | L | 0.2951 | |
| 12 | P | L | -0.2779 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.3690 | |
| 15 | P | L | -1.7700 | |
| 16 | G | L | -2.0025 | |
| 17 | E | L | -2.3141 | |
| 18 | P | L | -1.8445 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.6228 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.6685 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.7477 | |
| 25 | S | L | -0.6945 | |
| 26 | S | L | -0.4862 | |
| 27 | Q | L | -0.5356 | |
| 28 | S | L | -0.5929 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | -0.1664 | |
| 31 | H | L | -1.0624 | |
| 32 | S | L | -0.9367 | |
| 34 | N | L | -1.0679 | |
| 35 | G | L | -0.7240 | |
| 36 | Y | L | 0.1140 | |
| 37 | N | L | -0.0179 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | D | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.0171 | |
| 46 | P | L | -1.2663 | |
| 47 | G | L | -1.2239 | |
| 48 | Q | L | -1.8393 | |
| 49 | S | L | -1.2066 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -0.5489 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1282 | |
| 56 | L | L | 0.2975 | |
| 57 | G | L | 0.0000 | |
| 65 | S | L | -0.4828 | |
| 66 | T | L | -0.3394 | |
| 67 | R | L | -1.0386 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.6073 | |
| 70 | G | L | -0.8439 | |
| 71 | V | L | -0.7917 | |
| 72 | P | L | -1.2222 | |
| 74 | D | L | -2.1535 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9917 | |
| 78 | G | L | -0.6505 | |
| 79 | S | L | -0.7196 | |
| 80 | G | L | -1.0413 | |
| 83 | S | L | -0.7233 | |
| 84 | G | L | -0.8508 | |
| 85 | T | L | -1.2085 | |
| 86 | D | L | -1.8005 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9128 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.2546 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5970 | |
| 93 | R | L | -2.5334 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.5573 | |
| 96 | A | L | -1.5095 | |
| 97 | E | L | -2.2069 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.5046 | |
| 100 | G | L | 0.0000 | |
| 101 | V | L | 0.2747 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | M | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | I | L | 0.0000 | |
| 108 | L | L | -0.3336 | |
| 109 | Q | L | -1.1820 | |
| 114 | T | L | -0.9934 | |
| 115 | P | L | -1.4127 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.3394 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.9483 | |
| 121 | G | L | -0.3424 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | 0.3306 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | 0.0000 | |
| 126 | I | L | -1.0390 | |
| 127 | K | L | -1.0597 | |
| 1001 | R | L | -1.1187 | |
| 1001C | T | L | 0.1148 | |
| 1001B | V | L | 1.1255 | |
| 1001A | A | L | 0.3096 | |
| 1001 | A | L | -0.0445 | |
| 1002 | P | L | -0.3507 | |
| 1003 | S | L | -0.2026 | |
| 1004 | V | L | 0.0000 | |
| 1005 | F | L | 0.0268 | |
| 1006 | I | L | 0.0000 | |
| 1007 | F | L | 0.0000 | |
| 1008 | P | L | 0.0000 | |
| 1009 | P | L | 0.0000 | |
| 1010 | S | L | 0.0000 | |
| 1011 | D | L | -2.6836 | |
| 1012 | E | L | -2.3542 | |
| 1013 | Q | L | 0.0000 | |
| 1014 | L | L | -1.8827 | |
| 1015 | K | L | -2.6097 | |
| 1016 | S | L | -1.5732 | |
| 1017 | G | L | -1.2673 | |
| 1018 | T | L | -0.9087 | |
| 1019 | A | L | 0.0000 | |
| 1020 | S | L | 0.0000 | |
| 1021 | V | L | 0.0000 | |
| 1022 | V | L | 0.0000 | |
| 1023 | C | L | 0.0000 | |
| 1024 | L | L | 0.0000 | |
| 1025 | L | L | 0.0000 | |
| 1026 | N | L | 0.0000 | |
| 1027 | N | L | -1.0324 | |
| 1028 | F | L | 0.0000 | |
| 1029 | Y | L | 0.0000 | |
| 1030 | P | L | 0.0000 | |
| 1035 | R | L | -1.7962 | |
| 1036 | E | L | -2.5537 | |
| 1037 | A | L | -1.9647 | |
| 1038 | K | L | -2.5075 | |
| 1039 | V | L | 0.0000 | |
| 1040 | Q | L | -0.8521 | |
| 1041 | W | L | 0.0000 | |
| 1042 | K | L | 0.0000 | |
| 1043 | V | L | 0.0000 | |
| 1044 | D | L | -2.1228 | |
| 1045 | N | L | -1.4795 | |
| 1045A | A | L | -0.1244 | |
| 1045B | L | L | 0.8510 | |
| 1045C | Q | L | 0.0208 | |
| 1045D | S | L | -0.5129 | |
| 1045E | G | L | -0.9491 | |
| 1077 | N | L | -0.8165 | |
| 1078 | S | L | -0.9491 | |
| 1079 | Q | L | -1.0502 | |
| 1080 | E | L | -1.2821 | |
| 1081 | S | L | 0.0000 | |
| 1082 | V | L | -0.3891 | |
| 1083 | T | L | -0.9883 | |
| 1084 | E | L | -2.0976 | |
| 1084A | Q | L | -1.6496 | |
| 1084B | D | L | -1.7884 | |
| 1084C | S | L | -1.6022 | |
| 1084D | K | L | -2.2813 | |
| 1085E | D | L | -1.8430 | |
| 1085D | S | L | -1.8483 | |
| 1085C | T | L | 0.0000 | |
| 1085B | Y | L | 0.0000 | |
| 1085A | S | L | 0.0000 | |
| 1085 | L | L | 0.0000 | |
| 1086 | S | L | 0.0000 | |
| 1087 | S | L | 0.0000 | |
| 1088 | T | L | -0.4759 | |
| 1089 | L | L | 0.0000 | |
| 1090 | T | L | -0.2340 | |
| 1091 | L | L | -0.0313 | |
| 1092 | S | L | -0.5978 | |
| 1093 | K | L | -1.8330 | |
| 1094 | A | L | -1.4972 | |
| 1095 | D | L | -1.6358 | |
| 1096 | Y | L | -2.0725 | |
| 1097 | E | L | -3.4422 | |
| 1098 | K | L | -3.3700 | |
| 1099 | H | L | -3.0618 | |
| 1100 | K | L | -3.5274 | |
| 1101 | V | L | -2.2148 | |
| 1102 | Y | L | 0.0000 | |
| 1103 | A | L | 0.0000 | |
| 1104 | C | L | 0.0000 | |
| 1105 | E | L | -0.5723 | |
| 1106 | V | L | 0.0000 | |
| 1107 | T | L | -1.2089 | |
| 1108 | H | L | 0.0000 | |
| 1109 | Q | L | -1.6807 | |
| 1110 | G | L | -0.5326 | |
| 1113 | L | L | -0.4083 | |
| 1114 | S | L | -0.4819 | |
| 1115 | S | L | -0.4413 | |
| 1116 | P | L | -0.4287 | |
| 1117 | V | L | -0.0437 | |
| 1118 | T | L | -0.3941 | |
| 1119 | K | L | -0.6106 | |
| 1120 | S | L | -0.7742 | |
| 1121 | F | L | 0.0000 | |
| 1122 | N | L | -2.5268 | |
| 1123 | R | L | -3.2907 | |
| 1124 | G | L | -2.6044 | |
| 1125 | E | L | -2.8879 | |
| 1 | E | H | -1.8293 | |
| 2 | V | H | -0.7249 | |
| 3 | Q | H | -1.0475 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 1.0527 | |
| 6 | Q | H | 0.0000 | |
| 7 | F | H | 2.0352 | |
| 8 | G | H | 0.5986 | |
| 9 | G | H | 0.6584 | |
| 11 | G | H | 0.6605 | |
| 12 | L | H | 0.4713 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.6100 | |
| 15 | P | H | -1.5362 | |
| 16 | G | H | -1.4661 | |
| 17 | G | H | -1.2346 | |
| 18 | S | H | -0.9595 | |
| 19 | L | H | -0.6042 | |
| 20 | R | H | -0.7637 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | 0.7143 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.6785 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7011 | |
| 27 | G | H | -0.9268 | |
| 28 | Y | H | -0.3672 | |
| 29 | T | H | -0.2576 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.4559 | |
| 36 | G | H | -0.2148 | |
| 37 | Y | H | -0.1982 | |
| 38 | A | H | -0.2749 | |
| 39 | M | H | 0.0000 | |
| 40 | R | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | R | H | -0.8703 | |
| 45 | A | H | -0.9800 | |
| 46 | P | H | -1.1069 | |
| 47 | G | H | -1.3498 | |
| 48 | K | H | -1.9808 | |
| 49 | G | H | -1.2921 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7405 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | G | H | 0.0000 | |
| 58 | I | H | 0.8116 | |
| 59 | G | H | 0.0225 | |
| 63 | A | H | -0.1519 | |
| 64 | D | H | -0.3571 | |
| 65 | T | H | 0.0829 | |
| 66 | Y | H | 0.0011 | |
| 67 | Y | H | -0.6076 | |
| 68 | V | H | 0.0000 | |
| 69 | D | H | -2.7862 | |
| 70 | S | H | -1.8310 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5171 | |
| 74 | G | H | -1.7294 | |
| 75 | R | H | -1.4982 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5875 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3729 | |
| 80 | R | H | -0.6297 | |
| 81 | D | H | -1.3542 | |
| 82 | N | H | -1.4349 | |
| 83 | S | H | -1.6021 | |
| 84 | R | H | -2.3278 | |
| 85 | N | H | -1.4307 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | 0.0805 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7423 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2214 | |
| 93 | G | H | -1.3288 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0040 | |
| 96 | A | H | -1.4144 | |
| 97 | E | H | -1.7912 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4556 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.5440 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | K | H | -0.3066 | |
| 107 | C | H | 0.0000 | |
| 108 | H | H | -0.8761 | |
| 109 | H | H | -1.6497 | |
| 110 | N | H | -1.5319 | |
| 111 | N | H | -0.9471 | |
| 112A | Y | H | -0.2773 | |
| 112 | Y | H | 0.2348 | |
| 113 | C | H | 0.0000 | |
| 114 | N | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.2827 | |
| 117 | V | H | 0.2088 | |
| 118 | W | H | -0.0553 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9771 | |
| 121 | G | H | 0.0551 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.3595 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0000 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7166 | |
| 128 | S | H | -0.6533 | |
| 1001 | A | H | -0.3903 | |
| 1001C | S | H | -0.4015 | |
| 1001B | T | H | -0.5535 | |
| 1001A | K | H | -1.0250 | |
| 1001 | G | H | -1.2449 | |
| 1002 | P | H | 0.0000 | |
| 1003 | S | H | -0.2076 | |
| 1004 | V | H | -0.1805 | |
| 1005 | F | H | -0.4331 | |
| 1006 | P | H | -0.7185 | |
| 1007 | L | H | 0.0000 | |
| 1008 | A | H | 0.0000 | |
| 1009 | P | H | 0.0000 | |
| 1010 | S | H | -0.8943 | |
| 1011 | S | H | -0.8669 | |
| 1012 | K | H | -0.8551 | |
| 1013 | S | H | -0.8010 | |
| 1014 | T | H | -0.8376 | |
| 1015 | S | H | -0.7539 | |
| 1016 | G | H | -0.8419 | |
| 1017 | G | H | -0.8398 | |
| 1018 | T | H | -0.5644 | |
| 1019 | A | H | -0.3570 | |
| 1020 | A | H | 0.0000 | |
| 1021 | L | H | 0.0000 | |
| 1022 | G | H | 0.0000 | |
| 1023 | C | H | 0.0000 | |
| 1024 | L | H | 0.0000 | |
| 1025 | V | H | 0.0000 | |
| 1026 | K | H | 0.0000 | |
| 1027 | D | H | -0.3538 | |
| 1028 | Y | H | 0.0000 | |
| 1029 | F | H | 0.0000 | |
| 1030 | P | H | -0.5440 | |
| 1035 | E | H | -0.7575 | |
| 1036 | P | H | -0.9623 | |
| 1037 | V | H | 0.0000 | |
| 1038 | T | H | -0.6646 | |
| 1039 | V | H | -0.3861 | |
| 1040 | S | H | -0.3522 | |
| 1041 | W | H | 0.0000 | |
| 1042 | N | H | -0.8280 | |
| 1043 | S | H | -0.7301 | |
| 1044 | G | H | -0.3578 | |
| 1045 | A | H | -0.2531 | |
| 1045A | L | H | -0.0325 | |
| 1045B | T | H | -0.1969 | |
| 1045C | S | H | -0.1968 | |
| 1077 | G | H | -0.2880 | |
| 1078 | V | H | 0.0707 | |
| 1079 | H | H | -0.0409 | |
| 1080 | T | H | -0.0013 | |
| 1081 | F | H | 0.0000 | |
| 1082 | P | H | -0.5054 | |
| 1083 | A | H | 0.0474 | |
| 1084 | V | H | 0.2940 | |
| 1084A | L | H | 0.7794 | |
| 1084B | Q | H | 0.0184 | |
| 1084C | S | H | -0.2581 | |
| 1084D | S | H | -0.2440 | |
| 1085D | G | H | -0.1100 | |
| 1085C | L | H | 0.0198 | |
| 1085B | Y | H | 0.0000 | |
| 1085A | S | H | 0.0000 | |
| 1085 | L | H | 0.0000 | |
| 1086 | S | H | 0.0000 | |
| 1087 | S | H | 0.0000 | |
| 1088 | V | H | 0.0000 | |
| 1089 | V | H | 0.0000 | |
| 1090 | T | H | -0.1992 | |
| 1091 | V | H | 0.0000 | |
| 1092 | P | H | -0.5996 | |
| 1093 | S | H | 0.0000 | |
| 1094 | S | H | -0.9296 | |
| 1095 | S | H | -0.8570 | |
| 1096 | L | H | 0.0000 | |
| 1098 | G | H | -1.1145 | |
| 1099 | T | H | -1.0071 | |
| 1100 | Q | H | -1.5355 | |
| 1101 | T | H | -1.1614 | |
| 1102 | Y | H | 0.0000 | |
| 1103 | I | H | -0.8365 | |
| 1104 | C | H | 0.0000 | |
| 1105 | N | H | -1.4367 | |
| 1106 | V | H | 0.0000 | |
| 1107 | N | H | -1.9721 | |
| 1108 | H | H | 0.0000 | |
| 1109 | K | H | -2.7892 | |
| 1110 | P | H | -1.6229 | |
| 1113 | S | H | -1.7881 | |
| 1114 | N | H | -2.5267 | |
| 1115 | T | H | -2.0535 | |
| 1116 | K | H | -2.6799 | |
| 1117 | V | H | -1.4064 | |
| 1118 | D | H | -2.4447 | |
| 1119 | K | H | -1.6443 | |
| 1120 | K | H | -2.0100 | |
| 1121 | V | H | 0.0000 | |
| 2001 | E | H | -1.4549 | |
| 2002 | P | H | -0.9580 | |
| 2003 | K | H | -1.0537 | |
| 2004 | S | H | -1.2232 | |
| 2005 | C | H | -1.2360 | |
| 2006 | D | H | -2.3777 | |
| 2007 | K | H | -2.7044 | |
| 2008 | T | H | -1.3633 |