| Chain sequence(s) |
A: CPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSSTTAVVTNP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 10 | C | A | -0.2822 | |
| 11 | P | A | 0.0000 | |
| 12 | L | A | 0.0000 | |
| 13 | M | A | -0.3822 | |
| 14 | V | A | 0.0000 | |
| 15 | K | A | -0.5293 | |
| 16 | V | A | 0.0000 | |
| 17 | L | A | 0.6382 | |
| 18 | D | A | 0.0000 | |
| 19 | A | A | 0.4277 | |
| 20 | V | A | 0.7078 | |
| 21 | R | A | -1.0906 | |
| 22 | G | A | -0.7298 | |
| 23 | S | A | -0.4754 | |
| 24 | P | A | -0.5402 | |
| 25 | A | A | 0.0000 | |
| 26 | I | A | -0.4420 | |
| 27 | N | A | -1.7139 | |
| 28 | V | A | 0.0000 | |
| 29 | A | A | -1.1073 | |
| 30 | V | A | 0.0000 | |
| 31 | H | A | -0.9946 | |
| 32 | V | A | 0.0000 | |
| 33 | F | A | -0.5034 | |
| 34 | R | A | -0.9304 | |
| 35 | K | A | -1.5678 | |
| 36 | A | A | -1.7210 | |
| 37 | A | A | -1.6850 | |
| 38 | D | A | -2.8425 | |
| 39 | D | A | -2.8897 | |
| 40 | T | A | -1.9091 | |
| 41 | W | A | -1.2757 | |
| 42 | E | A | -2.2509 | |
| 43 | P | A | -1.0553 | |
| 44 | F | A | -0.5851 | |
| 45 | A | A | -0.3712 | |
| 46 | S | A | -0.8810 | |
| 47 | G | A | -1.5088 | |
| 48 | K | A | -2.4429 | |
| 49 | T | A | 0.0000 | |
| 50 | S | A | -1.7782 | |
| 51 | E | A | -2.0662 | |
| 52 | S | A | -1.1580 | |
| 53 | G | A | 0.0000 | |
| 54 | E | A | -1.4522 | |
| 55 | L | A | 0.0000 | |
| 56 | H | A | -1.3751 | |
| 57 | G | A | -0.7539 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | 0.0000 | |
| 60 | T | A | -1.7983 | |
| 61 | E | A | -3.1209 | |
| 62 | E | A | -3.2036 | |
| 63 | E | A | -2.7114 | |
| 64 | F | A | 0.0000 | |
| 65 | V | A | -1.5376 | |
| 66 | E | A | -2.1863 | |
| 67 | G | A | -0.9250 | |
| 68 | I | A | 0.1709 | |
| 69 | Y | A | 0.0000 | |
| 70 | K | A | -0.1982 | |
| 71 | V | A | 0.0000 | |
| 72 | E | A | -1.1975 | |
| 73 | I | A | 0.0000 | |
| 75 | T | A | -1.3512 | |
| 76 | K | A | -2.2492 | |
| 77 | S | A | -1.7104 | |
| 78 | Y | A | 0.0000 | |
| 79 | W | A | 0.0000 | |
| 80 | K | A | -1.8947 | |
| 81 | A | A | -0.7202 | |
| 82 | L | A | 0.0571 | |
| 83 | G | A | -0.4798 | |
| 84 | I | A | -0.1490 | |
| 85 | S | A | -0.1953 | |
| 86 | P | A | 0.0358 | |
| 87 | F | A | 1.4607 | |
| 88 | H | A | -0.5854 | |
| 89 | E | A | -2.3494 | |
| 90 | H | A | -1.7984 | |
| 91 | A | A | 0.0000 | |
| 92 | E | A | -1.3939 | |
| 93 | V | A | -0.0338 | |
| 94 | V | A | 0.9356 | |
| 95 | F | A | 0.8273 | |
| 96 | T | A | -0.2603 | |
| 97 | A | A | 0.0000 | |
| 98 | N | A | -1.9196 | |
| 99 | D | A | -2.4788 | |
| 100 | S | A | -1.5655 | |
| 101 | G | A | -1.4205 | |
| 102 | P | A | -2.1844 | |
| 103 | R | A | -1.7065 | |
| 104 | R | A | -1.3679 | |
| 105 | Y | A | 0.0000 | |
| 106 | T | A | 0.4654 | |
| 107 | I | A | 0.0000 | |
| 108 | A | A | 0.1795 | |
| 109 | A | A | 0.0000 | |
| 110 | L | A | 0.9227 | |
| 111 | L | A | 0.0000 | |
| 112 | S | A | 0.9805 | |
| 113 | P | A | 0.9681 | |
| 114 | Y | A | 1.8158 | |
| 115 | S | A | 0.9195 | |
| 116 | Y | A | 0.5996 | |
| 117 | S | A | 0.1156 | |
| 118 | T | A | -0.0422 | |
| 119 | T | A | 0.4568 | |
| 120 | A | A | 0.9435 | |
| 121 | V | A | 1.7335 | |
| 122 | V | A | 1.2999 | |
| 123 | T | A | -0.2720 | |
| 124 | N | A | -1.6591 | |
| 125 | P | A | -1.1409 |