Project name: 1064

Status: done

Started: 2025-06-25 13:32:48
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Chain sequence(s) H: DVQLQESGGGLVQPGGSLRLSCAASGVTDSNGCMGWFRQAPGKERERVASIDSDGQTLYADSVKGRFTISQDNTENTLYLQMNTLKPEDTATYYCAAGATSQPGFSCRILGPGWYTYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-2.9369
Maximal score value
1.3296
Average score
-0.7728
Total score value
-98.9129

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.1241
2 V H 0.0000
3 Q H -1.8964
4 L H 0.0000
5 Q H -1.7288
6 E H 0.0000
7 S H -1.0171
8 G H -0.8765
9 G H -0.5883
11 G H 0.2084
12 L H 1.1045
13 V H -0.0463
14 Q H -1.4080
15 P H -1.8509
16 G H -1.4371
17 G H -0.9383
18 S H -1.0070
19 L H -0.4493
20 R H -1.1907
21 L H 0.0000
22 S H -0.6519
23 C H 0.0000
24 A H -1.1914
25 A H -1.2652
26 S H -1.4656
27 G H -1.4879
28 V H -1.2244
29 T H -1.3297
30 D H -2.0572
35 S H -1.6416
36 N H -1.4134
37 G H -1.0450
38 C H -0.7819
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7387
45 A H -1.6130
46 P H -1.1003
47 G H -1.4619
48 K H -2.4019
49 E H -2.9369
50 R H -2.0075
51 E H -1.1760
52 R H 0.0000
53 V H 0.0000
54 A H 0.0000
55 S H 0.0000
56 I H 0.0000
57 D H -1.4105
58 S H -2.0300
59 D H -2.6475
63 G H -1.8958
64 Q H -1.7692
65 T H -0.5000
66 L H 0.4858
67 Y H -0.2467
68 A H -0.9081
69 D H -2.3539
70 S H -1.7334
71 V H 0.0000
72 K H -2.4710
74 G H -1.7556
75 R H -1.5235
76 F H 0.0000
77 T H -0.6208
78 I H 0.0000
79 S H -0.7499
80 Q H -1.8467
81 D H -2.4542
82 N H -2.6527
83 T H -2.0398
84 E H -2.8674
85 N H -2.3434
86 T H 0.0000
87 L H 0.0000
88 Y H -0.4981
89 L H 0.0000
90 Q H -0.8384
91 M H 0.0000
92 N H -1.2235
93 T H -1.2137
94 L H 0.0000
95 K H -2.6781
96 P H -2.1038
97 E H -2.4632
98 D H 0.0000
99 T H -1.0162
100 A H 0.0000
101 T H -0.8126
102 Y H 0.0000
103 Y H -0.4993
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 G H 0.1864
108 A H -0.6388
109 T H -0.0403
110 S H -0.2962
111 Q H -0.2858
111A P H -0.3165
111B G H -0.0889
111C F H 1.2732
111D S H 0.4828
112E C H 0.4167
112D R H 0.2130
112C I H 0.0000
112B L H 1.3296
112A G H 0.4366
112 P H 0.1082
113 G H 0.0681
114 W H 1.0004
115 Y H 0.0000
116 T H 0.0862
117 Y H -0.0583
118 W H -0.2369
119 G H -1.0237
120 Q H -1.4895
121 G H -1.0206
122 T H -1.0401
123 Q H -0.9788
124 V H 0.0000
125 T H -0.3500
126 V H 0.0000
127 S H -0.9403
128 S H -0.7909
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Laboratory of Theory of Biopolymers 2018