| Chain sequence(s) |
B: EAAREAKRAELEAFFDKIIALYEALGNEEAKERALKRKELLLEMLELATP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -2.8108 | |
| 2 | A | B | -1.8492 | |
| 3 | A | B | -1.7507 | |
| 4 | R | B | -3.1828 | |
| 5 | E | B | -3.6717 | |
| 6 | A | B | -2.6227 | |
| 7 | K | B | -3.1714 | |
| 8 | R | B | -3.1869 | |
| 9 | A | B | -2.1834 | |
| 10 | E | B | -2.7395 | |
| 11 | L | B | 0.0000 | |
| 12 | E | B | -2.1852 | |
| 13 | A | B | -1.3492 | |
| 14 | F | B | -0.0025 | |
| 15 | F | B | 0.0000 | |
| 16 | D | B | -2.1491 | |
| 17 | K | B | -1.7346 | |
| 18 | I | B | -0.4902 | |
| 19 | I | B | -1.3654 | |
| 20 | A | B | -0.8117 | |
| 21 | L | B | 0.2626 | |
| 22 | Y | B | -1.4451 | |
| 23 | E | B | -2.1818 | |
| 24 | A | B | -0.0732 | |
| 25 | L | B | 0.5715 | |
| 26 | G | B | -1.3765 | |
| 27 | N | B | -2.7494 | |
| 28 | E | B | -4.3183 | |
| 29 | E | B | -4.4682 | |
| 30 | A | B | -3.2545 | |
| 31 | K | B | -4.0131 | |
| 32 | E | B | -4.9525 | |
| 33 | R | B | -4.8600 | |
| 34 | A | B | 0.0000 | |
| 35 | L | B | -3.2937 | |
| 36 | K | B | -4.0305 | |
| 37 | R | B | -3.8552 | |
| 38 | K | B | -2.9747 | |
| 39 | E | B | -3.1554 | |
| 40 | L | B | -1.5880 | |
| 41 | L | B | -1.2319 | |
| 42 | L | B | -1.8282 | |
| 43 | E | B | -2.0600 | |
| 44 | M | B | -0.1265 | |
| 45 | L | B | 0.0000 | |
| 46 | E | B | -1.9492 | |
| 47 | L | B | 0.4535 | |
| 48 | A | B | -0.0225 | |
| 49 | T | B | -0.3285 | |
| 50 | P | B | -1.1825 |