| Chain sequence(s) |
A: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR
C: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR B: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR E: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR D: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR F: SVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR input PDB |
| Selected Chain(s) | A,C,B,E,D,F |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:10)
[INFO] Main: Simulation completed successfully. (00:10:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 305 | S | A | -0.2172 | |
| 306 | V | A | 0.3337 | |
| 307 | Q | A | -0.8624 | |
| 308 | I | A | 0.0000 | |
| 309 | V | A | 0.7399 | |
| 310 | Y | A | 0.0000 | |
| 311 | K | A | -1.0265 | |
| 312 | P | A | 0.0000 | |
| 313 | V | A | 0.8288 | |
| 314 | D | A | -0.2402 | |
| 315 | L | A | 0.7231 | |
| 316 | S | A | 0.0000 | |
| 317 | K | A | -1.2878 | |
| 318 | V | A | 0.0000 | |
| 319 | T | A | -0.0218 | |
| 320 | S | A | 0.0000 | |
| 321 | K | A | -1.9446 | |
| 322 | C | A | 0.0000 | |
| 323 | G | A | -0.3831 | |
| 324 | S | A | -0.2122 | |
| 325 | L | A | 0.0000 | |
| 326 | G | A | -0.2049 | |
| 327 | N | A | -0.7277 | |
| 328 | I | A | 0.0000 | |
| 329 | H | A | -0.3000 | |
| 330 | H | A | 0.0000 | |
| 331 | K | A | -0.3181 | |
| 332 | P | A | 0.0000 | |
| 333 | G | A | -0.1391 | |
| 334 | G | A | -0.0919 | |
| 335 | G | A | 0.0000 | |
| 336 | Q | A | 0.0000 | |
| 337 | V | A | 0.0000 | |
| 338 | E | A | 0.0000 | |
| 339 | V | A | 0.0000 | |
| 340 | K | A | -0.9297 | |
| 341 | S | A | -0.3138 | |
| 342 | E | A | -1.5438 | |
| 343 | K | A | -2.0538 | |
| 344 | L | A | 0.0000 | |
| 345 | D | A | -1.4010 | |
| 346 | F | A | 0.0000 | |
| 347 | K | A | -2.1256 | |
| 348 | D | A | -0.9112 | |
| 349 | R | A | -1.6091 | |
| 350 | V | A | 0.0000 | |
| 351 | Q | A | -0.8937 | |
| 352 | S | A | -0.3316 | |
| 353 | K | A | -1.0448 | |
| 354 | I | A | 0.0000 | |
| 355 | G | A | 0.0000 | |
| 356 | S | A | 0.0000 | |
| 357 | L | A | 0.0000 | |
| 358 | D | A | -1.3158 | |
| 359 | N | A | 0.0000 | |
| 360 | I | A | 0.7875 | |
| 361 | T | A | 0.0000 | |
| 362 | H | A | -0.4051 | |
| 363 | V | A | 0.0000 | |
| 364 | P | A | 0.0000 | |
| 365 | G | A | 0.0000 | |
| 366 | G | A | 0.0000 | |
| 367 | G | A | 0.0000 | |
| 368 | N | A | 0.0000 | |
| 369 | K | A | -0.9953 | |
| 370 | K | A | 0.0000 | |
| 371 | I | A | 0.9432 | |
| 372 | E | A | -0.3489 | |
| 373 | T | A | -0.0545 | |
| 374 | H | A | 0.0000 | |
| 375 | K | A | -1.3847 | |
| 376 | L | A | 0.0000 | |
| 377 | T | A | -0.0198 | |
| 378 | F | A | 0.0000 | |
| 379 | R | A | -1.2866 | |
| 305 | S | B | -0.2133 | |
| 306 | V | B | 0.3532 | |
| 307 | Q | B | -0.7023 | |
| 308 | I | B | 0.0000 | |
| 309 | V | B | 0.6790 | |
| 310 | Y | B | 0.0000 | |
| 311 | K | B | -0.6724 | |
| 312 | P | B | 0.0000 | |
| 313 | V | B | 0.8267 | |
| 314 | D | B | -0.1843 | |
| 315 | L | B | 0.5068 | |
| 316 | S | B | 0.0000 | |
| 317 | K | B | -1.0149 | |
| 318 | V | B | 0.0000 | |
| 319 | T | B | -0.0197 | |
| 320 | S | B | 0.0000 | |
| 321 | K | B | -2.0399 | |
| 322 | C | B | 0.0000 | |
| 323 | G | B | -0.2937 | |
| 324 | S | B | -0.2006 | |
| 325 | L | B | 0.0000 | |
| 326 | G | B | -0.2097 | |
| 327 | N | B | -0.7271 | |
| 328 | I | B | 0.0000 | |
| 329 | H | B | -0.3661 | |
| 330 | H | B | 0.0000 | |
| 331 | K | B | -0.4440 | |
| 332 | P | B | 0.0000 | |
| 333 | G | B | -0.1381 | |
| 334 | G | B | -0.1165 | |
| 335 | G | B | 0.0000 | |
| 336 | Q | B | 0.0000 | |
| 337 | V | B | 0.0000 | |
| 338 | E | B | -0.4200 | |
| 339 | V | B | 0.0000 | |
| 340 | K | B | -1.1910 | |
| 341 | S | B | -0.2801 | |
| 342 | E | B | -0.9914 | |
| 343 | K | B | -1.5360 | |
| 344 | L | B | 0.0000 | |
| 345 | D | B | -1.2779 | |
| 346 | F | B | 0.0000 | |
| 347 | K | B | -2.1129 | |
| 348 | D | B | -0.9162 | |
| 349 | R | B | -1.5829 | |
| 350 | V | B | 0.0000 | |
| 351 | Q | B | -1.3428 | |
| 352 | S | B | -0.4003 | |
| 353 | K | B | -1.0514 | |
| 354 | I | B | 0.0000 | |
| 355 | G | B | 0.0000 | |
| 356 | S | B | 0.0000 | |
| 357 | L | B | 0.0000 | |
| 358 | D | B | -1.3023 | |
| 359 | N | B | 0.0000 | |
| 360 | I | B | 0.7865 | |
| 361 | T | B | 0.0000 | |
| 362 | H | B | -0.3975 | |
| 363 | V | B | 0.0000 | |
| 364 | P | B | 0.0000 | |
| 365 | G | B | 0.0000 | |
| 366 | G | B | 0.0000 | |
| 367 | G | B | 0.0000 | |
| 368 | N | B | 0.0000 | |
| 369 | K | B | -1.0437 | |
| 370 | K | B | 0.0000 | |
| 371 | I | B | 0.8039 | |
| 372 | E | B | -0.3764 | |
| 373 | T | B | -0.0601 | |
| 374 | H | B | 0.0000 | |
| 375 | K | B | -1.2335 | |
| 376 | L | B | 0.0000 | |
| 377 | T | B | -0.0265 | |
| 378 | F | B | 0.0000 | |
| 379 | R | B | -1.6530 | |
| 305 | S | C | 0.0238 | |
| 306 | V | C | 1.2445 | |
| 307 | Q | C | -0.9026 | |
| 308 | I | C | 0.5205 | |
| 309 | V | C | 1.0264 | |
| 310 | Y | C | 0.1207 | |
| 311 | K | C | -1.7484 | |
| 312 | P | C | -0.2262 | |
| 313 | V | C | 1.1998 | |
| 314 | D | C | -0.8711 | |
| 315 | L | C | 1.2773 | |
| 316 | S | C | -0.0101 | |
| 317 | K | C | -1.7346 | |
| 318 | V | C | 0.0595 | |
| 319 | T | C | 0.0219 | |
| 320 | S | C | -0.3408 | |
| 321 | K | C | -1.8365 | |
| 322 | C | C | -0.1780 | |
| 323 | G | C | -0.4990 | |
| 324 | S | C | -0.2080 | |
| 325 | L | C | 0.4680 | |
| 326 | G | C | -0.3322 | |
| 327 | N | C | -1.2896 | |
| 328 | I | C | 0.0359 | |
| 329 | H | C | -0.5696 | |
| 330 | H | C | -0.3374 | |
| 331 | K | C | -0.4850 | |
| 332 | P | C | -0.1736 | |
| 333 | G | C | -0.2546 | |
| 334 | G | C | -0.1279 | |
| 335 | G | C | -0.1044 | |
| 336 | Q | C | -0.0558 | |
| 337 | V | C | 0.5534 | |
| 338 | E | C | -0.2139 | |
| 339 | V | C | 0.5552 | |
| 340 | K | C | -1.6328 | |
| 341 | S | C | -0.8427 | |
| 342 | E | C | -2.2512 | |
| 343 | K | C | -2.1223 | |
| 344 | L | C | -0.2174 | |
| 345 | D | C | -1.3032 | |
| 346 | F | C | 0.6021 | |
| 347 | K | C | -1.8492 | |
| 348 | D | C | -1.6373 | |
| 349 | R | C | -2.0341 | |
| 350 | V | C | 0.1119 | |
| 351 | Q | C | -0.7516 | |
| 352 | S | C | -0.4385 | |
| 353 | K | C | -0.3944 | |
| 354 | I | C | 1.1065 | |
| 355 | G | C | 0.0665 | |
| 356 | S | C | -0.1715 | |
| 357 | L | C | -0.0280 | |
| 358 | D | C | -1.8840 | |
| 359 | N | C | -0.5489 | |
| 360 | I | C | 1.0868 | |
| 361 | T | C | -0.0066 | |
| 362 | H | C | -0.6295 | |
| 363 | V | C | 0.6744 | |
| 364 | P | C | 0.0188 | |
| 365 | G | C | -0.4910 | |
| 366 | G | C | -0.2544 | |
| 367 | G | C | -0.5532 | |
| 368 | N | C | -1.0197 | |
| 369 | K | C | -2.0683 | |
| 370 | K | C | -1.1785 | |
| 371 | I | C | 0.4829 | |
| 372 | E | C | -1.5594 | |
| 373 | T | C | -0.4021 | |
| 374 | H | C | -0.6858 | |
| 375 | K | C | -1.6950 | |
| 376 | L | C | 0.6590 | |
| 377 | T | C | 0.4854 | |
| 378 | F | C | 1.6076 | |
| 379 | R | C | -1.6117 | |
| 305 | S | D | -0.0212 | |
| 306 | V | D | 0.9925 | |
| 307 | Q | D | -0.9434 | |
| 308 | I | D | 0.3727 | |
| 309 | V | D | 0.7009 | |
| 310 | Y | D | 0.0457 | |
| 311 | K | D | -1.6661 | |
| 312 | P | D | -0.2431 | |
| 313 | V | D | 0.8785 | |
| 314 | D | D | -0.7840 | |
| 315 | L | D | 1.3105 | |
| 316 | S | D | -0.0192 | |
| 317 | K | D | -1.7072 | |
| 318 | V | D | 0.0593 | |
| 319 | T | D | 0.0336 | |
| 320 | S | D | -0.3549 | |
| 321 | K | D | -1.8466 | |
| 322 | C | D | -0.1651 | |
| 323 | G | D | -0.4883 | |
| 324 | S | D | -0.2071 | |
| 325 | L | D | 0.4727 | |
| 326 | G | D | -0.3355 | |
| 327 | N | D | -1.2890 | |
| 328 | I | D | 0.0430 | |
| 329 | H | D | -0.5812 | |
| 330 | H | D | -0.5613 | |
| 331 | K | D | -1.7580 | |
| 332 | P | D | -0.4009 | |
| 333 | G | D | -0.3267 | |
| 334 | G | D | -0.4988 | |
| 335 | G | D | -0.2385 | |
| 336 | Q | D | -0.4177 | |
| 337 | V | D | 0.4734 | |
| 338 | E | D | -0.4059 | |
| 339 | V | D | 0.5294 | |
| 340 | K | D | -1.6596 | |
| 341 | S | D | -0.7823 | |
| 342 | E | D | -1.8463 | |
| 343 | K | D | -2.0100 | |
| 344 | L | D | -0.2657 | |
| 345 | D | D | -1.6178 | |
| 346 | F | D | 0.4979 | |
| 347 | K | D | -1.8468 | |
| 348 | D | D | -1.5888 | |
| 349 | R | D | -2.0677 | |
| 350 | V | D | -0.0965 | |
| 351 | Q | D | -1.2755 | |
| 352 | S | D | -0.5792 | |
| 353 | K | D | -0.7219 | |
| 354 | I | D | 1.0422 | |
| 355 | G | D | 0.0683 | |
| 356 | S | D | -0.1641 | |
| 357 | L | D | 0.0071 | |
| 358 | D | D | -1.8750 | |
| 359 | N | D | -0.5264 | |
| 360 | I | D | 1.1688 | |
| 361 | T | D | 0.0056 | |
| 362 | H | D | -0.6523 | |
| 363 | V | D | 0.6455 | |
| 364 | P | D | 0.0142 | |
| 365 | G | D | -0.4928 | |
| 366 | G | D | -0.2693 | |
| 367 | G | D | -0.5783 | |
| 368 | N | D | -0.9884 | |
| 369 | K | D | -2.0683 | |
| 370 | K | D | -1.1831 | |
| 371 | I | D | 0.4888 | |
| 372 | E | D | -1.4741 | |
| 373 | T | D | -0.4332 | |
| 374 | H | D | -0.8208 | |
| 375 | K | D | -1.2866 | |
| 376 | L | D | 0.6758 | |
| 377 | T | D | 0.4216 | |
| 378 | F | D | 1.2216 | |
| 379 | R | D | -1.5698 | |
| 305 | S | E | -0.0851 | |
| 306 | V | E | 0.6249 | |
| 307 | Q | E | -1.0225 | |
| 308 | I | E | 0.6035 | |
| 309 | V | E | 1.7992 | |
| 310 | Y | E | 0.2530 | |
| 311 | K | E | -1.6717 | |
| 312 | P | E | -0.0888 | |
| 313 | V | E | 1.7161 | |
| 314 | D | E | 0.0551 | |
| 315 | L | E | 1.4873 | |
| 316 | S | E | -0.1131 | |
| 317 | K | E | -1.7091 | |
| 318 | V | E | 0.2572 | |
| 319 | T | E | 0.0222 | |
| 320 | S | E | -0.3887 | |
| 321 | K | E | -1.8013 | |
| 322 | C | E | 0.0492 | |
| 323 | G | E | -0.4522 | |
| 324 | S | E | -0.2859 | |
| 325 | L | E | 0.1631 | |
| 326 | G | E | -0.5382 | |
| 327 | N | E | -1.2558 | |
| 328 | I | E | 0.3933 | |
| 329 | H | E | -0.4897 | |
| 330 | H | E | -0.5713 | |
| 331 | K | E | -0.9192 | |
| 332 | P | E | -0.2771 | |
| 333 | G | E | -0.5048 | |
| 334 | G | E | -0.3803 | |
| 335 | G | E | -0.6204 | |
| 336 | Q | E | -0.4709 | |
| 337 | V | E | 0.2618 | |
| 338 | E | E | -1.5887 | |
| 339 | V | E | -0.0318 | |
| 340 | K | E | -1.6637 | |
| 341 | S | E | -0.6579 | |
| 342 | E | E | -2.0704 | |
| 343 | K | E | -2.0104 | |
| 344 | L | E | 0.1801 | |
| 345 | D | E | -1.6962 | |
| 346 | F | E | -0.2760 | |
| 347 | K | E | -2.1384 | |
| 348 | D | E | -2.4203 | |
| 349 | R | E | -2.2283 | |
| 350 | V | E | -0.2812 | |
| 351 | Q | E | -1.2415 | |
| 352 | S | E | -0.6271 | |
| 353 | K | E | -1.7512 | |
| 354 | I | E | -0.0503 | |
| 355 | G | E | -0.2091 | |
| 356 | S | E | -0.0259 | |
| 357 | L | E | -0.1033 | |
| 358 | D | E | -1.8869 | |
| 359 | N | E | -0.3270 | |
| 360 | I | E | 1.2874 | |
| 361 | T | E | 0.0000 | |
| 362 | H | E | -0.9402 | |
| 363 | V | E | 0.0000 | |
| 364 | P | E | -0.0665 | |
| 365 | G | E | 0.0000 | |
| 366 | G | E | -0.1553 | |
| 367 | G | E | -0.1325 | |
| 368 | N | E | -0.4733 | |
| 369 | K | E | -1.8334 | |
| 370 | K | E | -0.1536 | |
| 371 | I | E | 1.9092 | |
| 372 | E | E | -0.4279 | |
| 373 | T | E | -0.2069 | |
| 374 | H | E | -0.4517 | |
| 375 | K | E | -1.7942 | |
| 376 | L | E | -0.1248 | |
| 377 | T | E | 0.0076 | |
| 378 | F | E | -0.0999 | |
| 379 | R | E | -1.8010 | |
| 305 | S | F | -0.0856 | |
| 306 | V | F | 0.6265 | |
| 307 | Q | F | -1.0130 | |
| 308 | I | F | 0.5997 | |
| 309 | V | F | 1.9558 | |
| 310 | Y | F | 0.2819 | |
| 311 | K | F | -1.7216 | |
| 312 | P | F | -0.0887 | |
| 313 | V | F | 1.7335 | |
| 314 | D | F | 0.1291 | |
| 315 | L | F | 1.4508 | |
| 316 | S | F | -0.1277 | |
| 317 | K | F | -1.6757 | |
| 318 | V | F | 0.3136 | |
| 319 | T | F | 0.0411 | |
| 320 | S | F | -0.3863 | |
| 321 | K | F | -1.8419 | |
| 322 | C | F | -0.1064 | |
| 323 | G | F | -0.4704 | |
| 324 | S | F | -0.2623 | |
| 325 | L | F | 0.2314 | |
| 326 | G | F | -0.5499 | |
| 327 | N | F | -1.2719 | |
| 328 | I | F | 0.2802 | |
| 329 | H | F | -0.7795 | |
| 330 | H | F | -0.5735 | |
| 331 | K | F | -0.6980 | |
| 332 | P | F | -0.2364 | |
| 333 | G | F | -0.4677 | |
| 334 | G | F | -0.1911 | |
| 335 | G | F | -0.3282 | |
| 336 | Q | F | -0.2372 | |
| 337 | V | F | 0.4847 | |
| 338 | E | F | -0.5109 | |
| 339 | V | F | 0.2369 | |
| 340 | K | F | -1.6767 | |
| 341 | S | F | -0.6722 | |
| 342 | E | F | -2.1731 | |
| 343 | K | F | -1.9859 | |
| 344 | L | F | 0.2180 | |
| 345 | D | F | -1.6693 | |
| 346 | F | F | -0.2528 | |
| 347 | K | F | -2.1276 | |
| 348 | D | F | -2.4205 | |
| 349 | R | F | -2.1124 | |
| 350 | V | F | -0.2923 | |
| 351 | Q | F | -1.2885 | |
| 352 | S | F | -0.6308 | |
| 353 | K | F | -1.7492 | |
| 354 | I | F | -0.0436 | |
| 355 | G | F | -0.2017 | |
| 356 | S | F | 0.0000 | |
| 357 | L | F | -0.0968 | |
| 358 | D | F | -1.8826 | |
| 359 | N | F | -0.3211 | |
| 360 | I | F | 1.2683 | |
| 361 | T | F | 0.0000 | |
| 362 | H | F | -0.9345 | |
| 363 | V | F | 0.0000 | |
| 364 | P | F | -0.0648 | |
| 365 | G | F | 0.0000 | |
| 366 | G | F | -0.1886 | |
| 367 | G | F | -0.3952 | |
| 368 | N | F | -0.5317 | |
| 369 | K | F | -1.8348 | |
| 370 | K | F | -0.1204 | |
| 371 | I | F | 1.8695 | |
| 372 | E | F | -0.5877 | |
| 373 | T | F | -0.2668 | |
| 374 | H | F | -0.4796 | |
| 375 | K | F | -1.7860 | |
| 376 | L | F | -0.1175 | |
| 377 | T | F | 0.0038 | |
| 378 | F | F | -0.1255 | |
| 379 | R | F | -1.8058 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine