Project name: query_structure

Status: done

Started: 2026-03-16 23:53:59
Settings
Chain sequence(s) A: MADVQLVESGGGLVQAGDSLRLSCAASGPTGAMAWFHQGLGKEREFVGGISPSGDNIYYADSVKGRFTIDRDNAKNTVSLQMNSLKPEDMGVYYCAARRRVTLFTSRTDYEFWGRGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:21)
Show buried residues

Minimal score value
-3.4276
Maximal score value
1.7558
Average score
-0.8427
Total score value
-102.8056

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6619
2 A A -0.4213
3 D A -2.1524
4 V A -1.4745
5 Q A -1.2803
6 L A 0.0000
7 V A 1.0116
8 E A 0.0000
9 S A -0.4830
10 G A -1.0569
11 G A -0.8405
12 G A -0.0570
13 L A 1.0674
14 V A -0.1338
15 Q A -1.4418
16 A A -1.6087
17 G A -1.6626
18 D A -1.7281
19 S A -1.5764
20 L A -1.2464
21 R A -2.1729
22 L A 0.0000
23 S A -0.6822
24 C A 0.0000
25 A A -0.1751
26 A A -0.5977
27 S A -0.8807
28 G A -1.1918
29 P A -1.1492
30 T A 0.0000
31 G A 0.0000
32 A A 0.0000
33 M A 0.0000
34 A A 0.0000
35 W A 0.0000
36 F A 0.0000
37 H A -1.3709
38 Q A -1.7656
39 G A -1.3111
40 L A 0.2819
41 G A -1.1080
42 K A -2.8780
43 E A -3.4276
44 R A -2.9266
45 E A -2.9431
46 F A 0.0000
47 V A 0.0000
48 G A 0.0000
49 G A 0.0000
50 I A 0.0000
51 S A 0.0994
52 P A -0.5641
53 S A -1.0263
54 G A -1.9152
55 D A -2.3666
56 N A -0.9370
57 I A 0.2550
58 Y A 1.0037
59 Y A -0.1552
60 A A -1.3331
61 D A -2.3500
62 S A -1.6537
63 V A 0.0000
64 K A -2.5124
65 G A -1.8106
66 R A -1.4210
67 F A 0.0000
68 T A -1.0721
69 I A 0.0000
70 D A -2.3607
71 R A -2.2870
72 D A -2.4536
73 N A -2.6496
74 A A -1.8045
75 K A -2.6114
76 N A -2.1167
77 T A -1.5242
78 V A 0.0000
79 S A 0.0000
80 L A 0.0000
81 Q A -1.5581
82 M A 0.0000
83 N A -1.5843
84 S A -1.4686
85 L A 0.0000
86 K A -2.4305
87 P A -1.8714
88 E A -2.0889
89 D A 0.0000
90 M A -0.4506
91 G A -0.4237
92 V A -0.2010
93 Y A 0.0000
94 Y A -0.3836
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 R A 0.0000
99 R A -3.2105
100 R A -1.9001
101 V A 0.8238
102 T A 0.8140
103 L A 1.7558
104 F A 0.7426
105 T A -0.0737
106 S A -1.1321
107 R A -2.2244
108 T A -2.0140
109 D A -2.9618
110 Y A 0.0000
111 E A -2.9752
112 F A 0.0000
113 W A -0.2543
114 G A -0.3607
115 R A -1.4211
116 G A 0.0000
117 T A 0.0000
118 Q A -0.9815
119 V A 0.0000
120 T A -0.1914
121 V A 0.0000
122 S A -0.4920
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Laboratory of Theory of Biopolymers 2018