| Chain sequence(s) |
A: MADVQLVESGGGLVQAGDSLRLSCAASGPTGAMAWFHQGLGKEREFVGGISPSGDNIYYADSVKGRFTIDRDNAKNTVSLQMNSLKPEDMGVYYCAARRRVTLFTSRTDYEFWGRGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6619 | |
| 2 | A | A | -0.4213 | |
| 3 | D | A | -2.1524 | |
| 4 | V | A | -1.4745 | |
| 5 | Q | A | -1.2803 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.0116 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.4830 | |
| 10 | G | A | -1.0569 | |
| 11 | G | A | -0.8405 | |
| 12 | G | A | -0.0570 | |
| 13 | L | A | 1.0674 | |
| 14 | V | A | -0.1338 | |
| 15 | Q | A | -1.4418 | |
| 16 | A | A | -1.6087 | |
| 17 | G | A | -1.6626 | |
| 18 | D | A | -1.7281 | |
| 19 | S | A | -1.5764 | |
| 20 | L | A | -1.2464 | |
| 21 | R | A | -2.1729 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.6822 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.1751 | |
| 26 | A | A | -0.5977 | |
| 27 | S | A | -0.8807 | |
| 28 | G | A | -1.1918 | |
| 29 | P | A | -1.1492 | |
| 30 | T | A | 0.0000 | |
| 31 | G | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | 0.0000 | |
| 37 | H | A | -1.3709 | |
| 38 | Q | A | -1.7656 | |
| 39 | G | A | -1.3111 | |
| 40 | L | A | 0.2819 | |
| 41 | G | A | -1.1080 | |
| 42 | K | A | -2.8780 | |
| 43 | E | A | -3.4276 | |
| 44 | R | A | -2.9266 | |
| 45 | E | A | -2.9431 | |
| 46 | F | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | G | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | 0.0994 | |
| 52 | P | A | -0.5641 | |
| 53 | S | A | -1.0263 | |
| 54 | G | A | -1.9152 | |
| 55 | D | A | -2.3666 | |
| 56 | N | A | -0.9370 | |
| 57 | I | A | 0.2550 | |
| 58 | Y | A | 1.0037 | |
| 59 | Y | A | -0.1552 | |
| 60 | A | A | -1.3331 | |
| 61 | D | A | -2.3500 | |
| 62 | S | A | -1.6537 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.5124 | |
| 65 | G | A | -1.8106 | |
| 66 | R | A | -1.4210 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.0721 | |
| 69 | I | A | 0.0000 | |
| 70 | D | A | -2.3607 | |
| 71 | R | A | -2.2870 | |
| 72 | D | A | -2.4536 | |
| 73 | N | A | -2.6496 | |
| 74 | A | A | -1.8045 | |
| 75 | K | A | -2.6114 | |
| 76 | N | A | -2.1167 | |
| 77 | T | A | -1.5242 | |
| 78 | V | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.5581 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.5843 | |
| 84 | S | A | -1.4686 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.4305 | |
| 87 | P | A | -1.8714 | |
| 88 | E | A | -2.0889 | |
| 89 | D | A | 0.0000 | |
| 90 | M | A | -0.4506 | |
| 91 | G | A | -0.4237 | |
| 92 | V | A | -0.2010 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.3836 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | R | A | 0.0000 | |
| 99 | R | A | -3.2105 | |
| 100 | R | A | -1.9001 | |
| 101 | V | A | 0.8238 | |
| 102 | T | A | 0.8140 | |
| 103 | L | A | 1.7558 | |
| 104 | F | A | 0.7426 | |
| 105 | T | A | -0.0737 | |
| 106 | S | A | -1.1321 | |
| 107 | R | A | -2.2244 | |
| 108 | T | A | -2.0140 | |
| 109 | D | A | -2.9618 | |
| 110 | Y | A | 0.0000 | |
| 111 | E | A | -2.9752 | |
| 112 | F | A | 0.0000 | |
| 113 | W | A | -0.2543 | |
| 114 | G | A | -0.3607 | |
| 115 | R | A | -1.4211 | |
| 116 | G | A | 0.0000 | |
| 117 | T | A | 0.0000 | |
| 118 | Q | A | -0.9815 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.1914 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.4920 |