| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGATFGNYGMGWFRQAPGKGRELVAAITSNGFWGYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCNARDSRFGKNGLDDYRAWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | WY57H,GE44H |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.0175553 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] FoldX: Building mutant model (00:01:13)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:22)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.4485 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.4672 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2641 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5583 | |
| 8 | G | H | -1.1966 | |
| 9 | G | H | -0.7939 | |
| 10 | G | H | -0.1066 | |
| 11 | L | H | 1.0049 | |
| 12 | V | H | 0.0287 | |
| 13 | Q | H | -1.2435 | |
| 14 | P | H | -1.4781 | |
| 15 | G | H | -1.4019 | |
| 16 | G | H | -0.9785 | |
| 17 | S | H | -1.4243 | |
| 18 | L | H | -1.0411 | |
| 19 | R | H | -2.3335 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4079 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0752 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.1245 | |
| 26 | G | H | -1.4320 | |
| 27 | A | H | -1.1743 | |
| 28 | T | H | -1.2062 | |
| 29 | F | H | 0.0000 | |
| 30 | G | H | -1.9282 | |
| 31 | N | H | -2.0952 | |
| 32 | Y | H | 0.0000 | |
| 33 | G | H | -0.8877 | |
| 34 | M | H | 0.0000 | |
| 35 | G | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | F | H | 0.0000 | |
| 38 | R | H | -1.4725 | |
| 39 | Q | H | -2.0951 | |
| 40 | A | H | -2.0153 | |
| 41 | P | H | -1.3692 | |
| 42 | G | H | -1.9430 | |
| 43 | K | H | -3.4133 | |
| 44 | E | H | -3.6549 | mutated: GE44H |
| 45 | R | H | -2.8974 | |
| 46 | E | H | -2.8304 | |
| 47 | L | H | -0.7598 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | A | H | 0.5488 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | 0.3000 | |
| 53 | S | H | -1.1380 | |
| 54 | N | H | -0.8968 | |
| 55 | G | H | 0.2180 | |
| 56 | F | H | 2.1089 | |
| 57 | Y | H | 2.1580 | mutated: WY57H |
| 58 | G | H | 1.2883 | |
| 59 | Y | H | 1.1244 | |
| 60 | Y | H | -0.3210 | |
| 61 | P | H | -1.3380 | |
| 62 | D | H | -2.4994 | |
| 63 | S | H | -1.8868 | |
| 64 | V | H | 0.0000 | |
| 65 | E | H | -2.6152 | |
| 66 | G | H | -1.9551 | |
| 67 | R | H | -1.8378 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.9803 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.2586 | |
| 72 | R | H | 0.0000 | |
| 73 | D | H | -2.4985 | |
| 74 | N | H | -3.0251 | |
| 75 | A | H | -1.9819 | |
| 76 | K | H | -2.7834 | |
| 77 | R | H | -2.5560 | |
| 78 | M | H | -1.2879 | |
| 79 | V | H | 0.0000 | |
| 80 | Y | H | 0.0000 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.6703 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.9356 | |
| 85 | S | H | -1.3826 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.1985 | |
| 88 | A | H | -1.6443 | |
| 89 | E | H | -2.2015 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.8324 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | -0.3812 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | -0.2227 | |
| 96 | C | H | 0.0000 | |
| 97 | N | H | 0.0000 | |
| 98 | A | H | 0.0000 | |
| 99 | R | H | -1.5027 | |
| 100 | D | H | 0.0000 | |
| 101 | S | H | -1.5947 | |
| 102 | R | H | -1.8702 | |
| 103 | F | H | -0.7022 | |
| 104 | G | H | -1.8093 | |
| 105 | K | H | -2.7173 | |
| 106 | N | H | -2.2973 | |
| 107 | G | H | -1.3955 | |
| 108 | L | H | -0.6469 | |
| 109 | D | H | -2.1774 | |
| 110 | D | H | -2.0798 | |
| 111 | Y | H | -1.1839 | |
| 112 | R | H | -2.0162 | |
| 113 | A | H | 0.0000 | |
| 114 | W | H | -0.1483 | |
| 115 | G | H | -0.0729 | |
| 116 | Q | H | -0.6492 | |
| 117 | G | H | 0.0000 | |
| 118 | T | H | -0.6651 | |
| 119 | Q | H | -0.9826 | |
| 120 | V | H | 0.0000 | |
| 121 | T | H | -0.2623 | |
| 122 | V | H | 0.0000 | |
| 123 | S | H | -0.7276 | |
| 124 | S | H | -0.6533 |