Project name: S87

Status: done

Started: 2026-01-09 06:30:00
Settings
Chain sequence(s) A: MQLSHHHHHHHHGSHHWARRARLAELEARALLALTDGIALDTEFAIDLAELRALLAAQAEGIELSPEERARLAELQALLAEAKAR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:39)
Show buried residues

Minimal score value
-3.1838
Maximal score value
0.7975
Average score
-1.2676
Total score value
-107.7442

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7833
2 Q A -0.0889
3 L A 0.7478
4 S A -0.4787
5 H A -1.6982
6 H A -2.1898
7 H A -2.6159
8 H A -2.5402
9 H A -2.5488
10 H A -2.5315
11 H A -2.3196
12 H A -2.1294
13 G A -1.5936
14 S A -1.3127
15 H A -1.5219
16 H A -1.1637
17 W A -0.2688
18 A A -0.6603
19 R A -1.5885
20 R A -1.7767
21 A A -1.5245
22 R A -2.4740
23 L A -1.9449
24 A A -2.0502
25 E A -2.8857
26 L A -2.2337
27 E A -2.0410
28 A A -1.4023
29 R A -1.9391
30 A A 0.0000
31 L A 0.3103
32 L A 0.7431
33 A A -0.1890
34 L A 0.4475
35 T A 0.0523
36 D A -1.2409
37 G A -0.5273
38 I A 0.7975
39 A A 0.4363
40 L A 0.3509
41 D A -1.5049
42 T A -1.1138
43 E A -1.6625
44 F A -0.5065
45 A A 0.2353
46 I A 0.4538
47 D A -0.7458
48 L A -0.2933
49 A A 0.0000
50 E A -0.8910
51 L A 0.0000
52 R A -2.1147
53 A A 0.0000
54 L A 0.0000
55 L A -0.8678
56 A A -1.5176
57 A A 0.0000
58 Q A -2.2491
59 A A -1.4543
60 E A -2.5681
61 G A -1.9637
62 I A -1.8482
63 E A -2.5909
64 L A 0.0000
65 S A -1.7933
66 P A -2.1360
67 E A -2.7572
68 E A -2.6304
69 R A -3.1838
70 A A -2.3079
71 R A -2.3405
72 L A -1.9603
73 A A -1.6506
74 E A -2.0450
75 L A 0.0000
76 Q A -1.4773
77 A A -1.1030
78 L A -0.6371
79 L A -0.8684
80 A A -1.5371
81 E A -2.1987
82 A A -1.8010
83 K A -2.5548
84 A A -2.0607
85 R A -2.6872
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Laboratory of Theory of Biopolymers 2018