Chain sequence(s) |
H: QVQLVQSGAEVKKPGSSVKVSCKASGYTFTDNYMIWVRQAPGQGLEWMGDINPYNGGTTFNQKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCARESPYFSNLYVMDYWGQGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCKASQSVDYDGDNYMNWYQQKPGQAPRLLIYAASNLESGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHLSNEDLSTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:26) [INFO] Main: Simulation completed successfully. (00:03:29) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5604 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.3928 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.7798 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.2871 | |
8 | G | H | -0.4205 | |
9 | A | H | 0.2037 | |
11 | E | H | 0.2690 | |
12 | V | H | 1.2120 | |
13 | K | H | -0.4971 | |
14 | K | H | -1.5707 | |
15 | P | H | -1.8356 | |
16 | G | H | -1.2846 | |
17 | S | H | -1.0481 | |
18 | S | H | -0.9911 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.1122 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.2026 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.4111 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7431 | |
27 | G | H | -1.0617 | |
28 | Y | H | -0.4785 | |
29 | T | H | -0.3629 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.0613 | |
36 | D | H | 0.4570 | |
37 | N | H | 0.0000 | |
38 | Y | H | 0.4423 | |
39 | M | H | 0.0000 | |
40 | I | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.4778 | |
45 | A | H | -0.9198 | |
46 | P | H | -0.7481 | |
47 | G | H | -1.1921 | |
48 | Q | H | -1.7167 | |
49 | G | H | -1.0636 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7299 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | D | H | -0.1996 | |
56 | I | H | 0.0000 | |
57 | N | H | 0.0000 | |
58 | P | H | 0.0000 | |
59 | Y | H | 0.3307 | |
62 | N | H | -0.9517 | |
63 | G | H | -1.1153 | |
64 | G | H | -0.7697 | |
65 | T | H | -0.4358 | |
66 | T | H | -0.7101 | |
67 | F | H | -1.0213 | |
68 | N | H | -1.9901 | |
69 | Q | H | -2.6599 | |
70 | K | H | -2.5010 | |
71 | F | H | 0.0000 | |
72 | K | H | -2.0748 | |
74 | G | H | -1.4435 | |
75 | R | H | -1.2368 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.5418 | |
78 | I | H | 0.0000 | |
79 | T | H | -0.3509 | |
80 | A | H | -0.6427 | |
81 | D | H | -1.3241 | |
82 | K | H | -1.9658 | |
83 | S | H | -1.2360 | |
84 | T | H | -0.9771 | |
85 | S | H | -1.2494 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.2301 | |
89 | M | H | 0.0000 | |
90 | E | H | -0.7611 | |
91 | L | H | 0.0000 | |
92 | S | H | -0.8318 | |
93 | S | H | -0.9750 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.1847 | |
96 | S | H | -1.8127 | |
97 | E | H | -2.2640 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.5412 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.4171 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.3283 | |
107 | E | H | 0.0000 | |
108 | S | H | 0.0000 | |
109 | P | H | 0.8677 | |
110 | Y | H | 2.1056 | |
111 | F | H | 2.2667 | |
111A | S | H | 0.7209 | |
112A | N | H | -0.6592 | |
112 | L | H | 0.0002 | |
113 | Y | H | 0.2375 | |
114 | V | H | 0.2598 | |
115 | M | H | 0.0000 | |
116 | D | H | -0.4633 | |
117 | Y | H | -0.5086 | |
118 | W | H | -0.2419 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.0836 | |
121 | G | H | -0.3357 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.7612 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.1103 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6274 | |
128 | S | H | -0.7280 | |
1 | E | L | -2.0931 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.8362 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.5143 | |
6 | Q | L | -0.5611 | |
7 | S | L | -0.6851 | |
8 | P | L | -0.4338 | |
9 | A | L | -0.4076 | |
10 | T | L | -0.4642 | |
11 | L | L | -0.0534 | |
12 | S | L | -0.1960 | |
13 | L | L | -0.5290 | |
14 | S | L | -0.9226 | |
15 | P | L | -1.3206 | |
16 | G | L | -1.6649 | |
17 | E | L | -2.0388 | |
18 | R | L | -2.4985 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.5437 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.8905 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.9866 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.6833 | |
27 | Q | L | -1.1089 | |
28 | S | L | -0.9106 | |
29 | V | L | 0.0000 | |
30 | D | L | -0.9824 | |
31 | Y | L | -0.2914 | |
34 | D | L | -1.7039 | |
35 | G | L | -1.3760 | |
36 | D | L | -1.2236 | |
37 | N | L | -0.9711 | |
38 | Y | L | -0.2232 | |
39 | M | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.1536 | |
46 | P | L | -0.9302 | |
47 | G | L | -1.2034 | |
48 | Q | L | -1.8298 | |
49 | A | L | -1.0870 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.7121 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.1232 | |
56 | A | L | -0.4011 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.7506 | |
66 | N | L | -1.0247 | |
67 | L | L | -0.1835 | |
68 | E | L | 0.0000 | |
69 | S | L | -0.4660 | |
70 | G | L | -0.4095 | |
71 | I | L | -0.1318 | |
72 | P | L | -0.2470 | |
74 | A | L | -0.0889 | |
75 | R | L | -0.5594 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.4934 | |
78 | G | L | -0.5166 | |
79 | S | L | -0.9394 | |
80 | G | L | -1.3524 | |
83 | S | L | -1.3364 | |
84 | G | L | -1.1963 | |
85 | T | L | -1.7917 | |
86 | D | L | -2.6357 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.8864 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5943 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.1749 | |
93 | S | L | -1.5255 | |
94 | L | L | 0.0000 | |
95 | E | L | -2.0623 | |
96 | P | L | -1.3770 | |
97 | E | L | -2.1864 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.3573 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.2018 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | H | L | 0.0000 | |
106 | L | L | 0.0000 | |
107 | S | L | -0.8714 | |
108 | N | L | -1.6011 | |
109 | E | L | -2.1738 | |
114 | D | L | -2.5863 | |
115 | L | L | 0.0000 | |
116 | S | L | 0.0000 | |
117 | T | L | -0.4584 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.5807 | |
121 | G | L | -0.7562 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.0248 | |
124 | V | L | 0.0000 | |
125 | E | L | 0.0873 | |
126 | I | L | 0.9623 | |
127 | K | L | -0.8852 |