| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRAGPEGHPLPDAPPPSPLYVRPPPSSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9448 | |
| 2 | L | A | 1.9699 | |
| 3 | P | A | 0.6593 | |
| 4 | P | A | 0.3625 | |
| 5 | T | A | 0.1235 | |
| 6 | T | A | 0.1390 | |
| 7 | P | A | 0.1952 | |
| 8 | V | A | 1.2077 | |
| 9 | A | A | 0.0386 | |
| 10 | K | A | -1.1439 | |
| 11 | V | A | -0.4069 | |
| 12 | Q | A | -1.5425 | |
| 13 | S | A | -1.6102 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4355 | |
| 16 | E | A | -2.4474 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4602 | |
| 20 | P | A | 0.1115 | |
| 21 | T | A | 0.1209 | |
| 22 | S | A | -0.1661 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0869 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1596 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7466 | |
| 31 | R | A | -2.6110 | |
| 32 | L | A | -0.7459 | |
| 33 | L | A | 1.2370 | |
| 34 | T | A | 1.4719 | |
| 35 | V | A | 2.0144 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2449 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6248 | |
| 40 | K | A | -1.8701 | |
| 41 | D | A | -0.7121 | |
| 42 | I | A | 1.2176 | |
| 43 | V | A | 2.3235 | |
| 44 | V | A | 1.8813 | |
| 45 | N | A | -0.3659 | |
| 46 | G | A | -0.2672 | |
| 47 | K | A | 0.0038 | |
| 48 | V | A | 2.3536 | |
| 49 | V | A | 2.7920 | |
| 50 | V | A | 1.6242 | |
| 51 | P | A | 0.4179 | |
| 52 | K | A | -0.6500 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1208 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4689 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2927 | |
| 70 | K | A | -1.8076 | |
| 71 | F | A | -0.6645 | |
| 72 | A | A | -0.5818 | |
| 73 | L | A | -0.8737 | |
| 74 | P | A | -1.2651 | |
| 75 | Q | A | -2.4822 | |
| 76 | K | A | -3.0992 | |
| 77 | D | A | -2.9881 | |
| 78 | F | A | -1.6406 | |
| 79 | Y | A | -1.9150 | |
| 80 | D | A | -2.7503 | |
| 81 | P | A | -2.4064 | |
| 82 | E | A | -3.0769 | |
| 83 | K | A | -3.4417 | |
| 84 | E | A | -2.5038 | |
| 85 | R | A | -1.3197 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6443 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9767 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3186 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6668 | |
| 99 | G | A | -0.5237 | |
| 100 | P | A | -0.4116 | |
| 101 | L | A | 0.0252 | |
| 102 | G | A | -0.2774 | |
| 103 | K | A | -0.7595 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4668 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1125 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3349 | |
| 110 | L | A | 0.3493 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9759 | |
| 113 | K | A | -0.3066 | |
| 114 | L | A | -0.9771 | |
| 115 | G | A | -0.8462 | |
| 116 | D | A | -1.3541 | |
| 117 | T | A | -1.1675 | |
| 118 | E | A | -2.5659 | |
| 119 | N | A | -2.3501 | |
| 120 | P | A | -1.5214 | |
| 121 | T | A | -0.7964 | |
| 122 | A | A | -0.4272 | |
| 123 | P | A | -0.1146 | |
| 124 | V | A | -0.4629 | |
| 125 | H | A | -1.6232 | |
| 126 | E | A | -2.6793 | |
| 127 | G | A | -2.0749 | |
| 128 | A | A | -1.4386 | |
| 129 | D | A | -2.1580 | |
| 130 | V | A | -1.4320 | |
| 131 | R | A | -0.8360 | |
| 132 | V | A | 0.2960 | |
| 133 | S | A | 0.1986 | |
| 134 | F | A | 0.1752 | |
| 135 | S | A | -0.1167 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6949 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5584 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2178 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1073 | |
| 157 | D | A | 0.4448 | |
| 158 | L | A | 1.0424 | |
| 159 | A | A | 0.9655 | |
| 160 | A | A | 0.3346 | |
| 161 | P | A | 0.5306 | |
| 162 | C | A | 0.5457 | |
| 163 | P | A | 0.0150 | |
| 164 | G | A | -0.1392 | |
| 165 | L | A | 0.4698 | |
| 166 | P | A | -0.1658 | |
| 167 | P | A | -0.3679 | |
| 168 | G | A | -0.4370 | |
| 169 | A | A | -0.0533 | |
| 170 | C | A | 0.6396 | |
| 171 | P | A | 0.7264 | |
| 172 | P | A | 1.0280 | |
| 173 | I | A | 2.2376 | |
| 174 | Q | A | 1.0691 | |
| 175 | L | A | 1.4478 | |
| 176 | V | A | 0.8180 | |
| 177 | N | A | -0.3082 | |
| 178 | S | A | 0.0419 | |
| 179 | V | A | 0.4515 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3852 | |
| 182 | D | A | 0.0891 | |
| 183 | G | A | -0.1595 | |
| 184 | D | A | -0.5533 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1674 | |
| 190 | F | A | 0.0704 | |
| 191 | G | A | -0.0922 | |
| 192 | N | A | -0.2630 | |
| 193 | M | A | -0.1299 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3437 | |
| 197 | E | A | -2.5452 | |
| 198 | L | A | -1.2203 | |
| 199 | Q | A | -2.5159 | |
| 200 | Q | A | -3.3123 | |
| 201 | D | A | -3.5893 | |
| 202 | R | A | -3.3220 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2167 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3455 | |
| 211 | S | A | -1.8719 | |
| 212 | T | A | -1.4291 | |
| 213 | R | A | -2.0963 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1696 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3236 | |
| 220 | L | A | 0.5439 | |
| 221 | K | A | -1.2239 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9328 | |
| 224 | N | A | -1.5455 | |
| 225 | E | A | -1.2996 | |
| 226 | A | A | -0.6687 | |
| 227 | Y | A | -0.4487 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6947 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1315 | |
| 234 | F | A | 0.0374 | |
| 235 | G | A | -0.9216 | |
| 236 | R | A | -2.6804 | |
| 237 | R | A | -2.9420 | |
| 238 | E | A | -2.1291 | |
| 239 | Q | A | -0.1052 | |
| 240 | V | A | 1.5589 | |
| 241 | Y | A | 1.2534 | |
| 242 | A | A | 0.1643 | |
| 243 | R | A | -1.3215 | |
| 244 | H | A | -1.1978 | |
| 245 | F | A | -0.1731 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5616 | |
| 249 | A | A | -1.2148 | |
| 250 | G | A | -1.1160 | |
| 251 | P | A | -1.1307 | |
| 252 | E | A | -1.3291 | |
| 253 | G | A | -1.2592 | |
| 254 | H | A | -1.4645 | |
| 255 | P | A | -1.3494 | |
| 256 | L | A | -0.4136 | |
| 257 | P | A | -0.9341 | |
| 258 | D | A | -1.8196 | |
| 259 | A | A | -0.8017 | |
| 260 | P | A | -0.9921 | |
| 261 | P | A | -0.7023 | |
| 262 | P | A | -0.1834 | |
| 263 | S | A | -0.0163 | |
| 264 | P | A | 0.7040 | |
| 265 | L | A | 1.5653 | |
| 266 | Y | A | 1.1756 | |
| 267 | V | A | 0.9326 | |
| 268 | R | A | -1.0807 | |
| 269 | P | A | -0.2628 | |
| 270 | P | A | -0.5483 | |
| 271 | P | A | -0.3407 | |
| 272 | S | A | -0.2876 | |
| 273 | S | A | 0.1274 | |
| 274 | P | A | 0.4773 | |
| 275 | Y | A | 1.2939 | |
| 276 | A | A | 0.7828 | |
| 277 | V | A | 1.7376 | |
| 278 | R | A | 0.3757 | |
| 279 | P | A | -0.3198 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5265 | |
| 282 | D | A | -0.9808 | |
| 283 | Y | A | 0.8140 | |
| 284 | F | A | 0.6938 | |
| 285 | G | A | 0.1477 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8241 | |
| 291 | L | A | 1.6127 | |
| 292 | V | A | 0.6098 | |
| 293 | S | A | -0.1539 | |
| 294 | S | A | -0.9635 | |
| 295 | D | A | -1.8427 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1406 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6643 | |
| 301 | R | A | -1.9274 | |
| 302 | P | A | -0.9947 | |
| 303 | F | A | -0.2036 | |
| 304 | W | A | -0.5345 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0849 | |
| 307 | R | A | -2.9274 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6518 | |
| 310 | G | A | -1.4122 | |
| 311 | N | A | -1.3932 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9292 | |
| 319 | N | A | -0.8897 | |
| 320 | E | A | -1.0506 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3575 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1842 | |
| 333 | N | A | 0.3960 | |
| 334 | F | A | 1.4536 | |
| 335 | T | A | 0.7459 | |
| 336 | I | A | 0.4313 | |
| 337 | S | A | -0.8361 | |
| 338 | Q | A | -1.4716 | |
| 339 | Q | A | -0.8526 | |
| 340 | L | A | 0.8068 | |
| 341 | C | A | 0.4473 | |
| 342 | T | A | 0.1580 | |
| 343 | P | A | -0.2764 | |
| 344 | A | A | 0.1758 | |
| 345 | P | A | 0.2020 | |
| 346 | N | A | -0.2827 | |
| 347 | V | A | 1.5509 | |
| 348 | Y | A | 1.4499 | |
| 349 | D | A | 0.0502 | |
| 350 | P | A | -0.3372 | |
| 351 | S | A | -0.2657 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5209 | |
| 354 | K | A | -1.6391 | |
| 355 | N | A | -1.6767 | |
| 356 | Y | A | -0.0930 | |
| 357 | L | A | 0.5749 | |
| 358 | R | A | 0.9192 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4798 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0069 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9019 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6701 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2999 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3282 | |
| 376 | L | A | -1.7668 | |
| 377 | D | A | -2.0483 | |
| 378 | P | A | -1.0702 | |
| 379 | G | A | -1.0268 | |
| 380 | V | A | -0.9396 | |
| 381 | L | A | -0.5477 | |
| 382 | A | A | -0.6650 | |
| 383 | H | A | -0.8518 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4041 | |
| 386 | T | A | -0.5769 | |
| 387 | M | A | -0.3330 | |
| 388 | N | A | -0.8724 | |
| 389 | P | A | -1.2763 | |
| 390 | T | A | -1.5730 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5731 | |
| 393 | E | A | -3.1623 | |
| 394 | N | A | -2.7312 | |
| 395 | W | A | -1.5853 | |
| 396 | N | A | -1.3189 | |
| 397 | L | A | -0.3007 | |
| 398 | G | A | 0.4648 | |
| 399 | F | A | 2.4078 | |
| 400 | V | A | 2.0282 | |
| 401 | P | A | 0.0485 | |
| 402 | P | A | -1.9148 | |
| 403 | K | A | -3.4668 | |
| 404 | E | A | -3.9765 | |
| 405 | R | A | -4.3760 | |
| 406 | E | A | -3.9728 | |
| 407 | D | A | -2.9336 | |
| 408 | P | A | -1.8033 | |
| 409 | Y | A | -0.9729 | |
| 410 | K | A | -2.0981 | |
| 411 | G | A | -0.6240 | |
| 412 | L | A | 0.6833 | |
| 413 | I | A | 1.5914 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3865 | |
| 416 | E | A | -1.6556 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8392 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8842 | |
| 421 | E | A | -2.4904 | |
| 422 | R | A | -2.0532 | |
| 423 | F | A | -1.0131 | |
| 424 | S | A | -1.3171 | |
| 425 | Q | A | -1.8448 | |
| 426 | D | A | -2.8961 | |
| 427 | L | A | -2.0135 | |
| 428 | D | A | -2.8123 | |
| 429 | Q | A | -2.6249 | |
| 430 | F | A | -1.4671 | |
| 431 | A | A | -0.9298 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6562 | |
| 435 | K | A | -0.7758 | |
| 436 | F | A | 0.1151 | |
| 437 | L | A | 1.0026 | |
| 438 | Y | A | 0.8022 | |
| 439 | Q | A | -0.2855 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine