| Chain sequence(s) |
A: MIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEKSLRVDALITATIEGRKVMLYTQKVRHFKEVDEPNALHLWVTDNNRTFHLGPFSVDSAENKTFANTLLYSDDALHLLQAKGDHESTAVSLAR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:30)
[INFO] Main: Simulation completed successfully. (00:08:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0041 | |
| 2 | I | A | 0.6167 | |
| 3 | A | A | 0.5453 | |
| 4 | M | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | V | A | -0.2931 | |
| 7 | P | A | -1.2059 | |
| 8 | N | A | -2.1395 | |
| 9 | K | A | -2.3723 | |
| 10 | T | A | 0.0000 | |
| 11 | Q | A | -1.8933 | |
| 12 | V | A | 0.0000 | |
| 13 | V | A | -1.4087 | |
| 14 | P | A | -1.7720 | |
| 15 | K | A | -1.6214 | |
| 16 | S | A | -1.3406 | |
| 17 | G | A | -1.4520 | |
| 18 | G | A | -1.9611 | |
| 19 | E | A | -2.7040 | |
| 20 | G | A | -2.2379 | |
| 21 | K | A | -2.3902 | |
| 22 | V | A | -1.1333 | |
| 23 | K | A | 0.0000 | |
| 24 | D | A | -1.4032 | |
| 25 | I | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | A | A | -0.0014 | |
| 28 | S | A | 0.0743 | |
| 29 | P | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | R | A | -0.9146 | |
| 34 | A | A | 0.0000 | |
| 35 | G | A | -1.4020 | |
| 36 | G | A | -1.2704 | |
| 37 | V | A | 0.0000 | |
| 38 | M | A | 0.0000 | |
| 39 | I | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | V | A | 0.0000 | |
| 43 | E | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | R | A | -0.7387 | |
| 46 | T | A | -0.9728 | |
| 47 | K | A | -1.3969 | |
| 48 | N | A | -1.8032 | |
| 49 | K | A | -2.0250 | |
| 50 | L | A | -0.8984 | |
| 51 | F | A | 0.0000 | |
| 52 | P | A | -1.2115 | |
| 53 | E | A | -1.5541 | |
| 54 | V | A | -0.0604 | |
| 55 | I | A | 0.1998 | |
| 56 | D | A | -1.4956 | |
| 57 | L | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | S | A | -1.3110 | |
| 60 | S | A | 0.0000 | |
| 61 | D | A | -0.8856 | |
| 62 | I | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | Y | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | K | A | -1.0930 | |
| 69 | A | A | -1.0281 | |
| 70 | P | A | 0.0000 | |
| 71 | E | A | -2.3591 | |
| 72 | T | A | -1.3917 | |
| 73 | W | A | -1.0599 | |
| 74 | Q | A | -1.3241 | |
| 75 | S | A | -1.0824 | |
| 76 | L | A | 0.0000 | |
| 77 | V | A | -0.1041 | |
| 78 | A | A | -0.4807 | |
| 79 | E | A | -0.7189 | |
| 80 | V | A | 0.0000 | |
| 81 | T | A | -0.6794 | |
| 82 | K | A | -1.3039 | |
| 83 | E | A | -1.6115 | |
| 84 | Y | A | -0.0330 | |
| 85 | W | A | -0.4557 | |
| 86 | Q | A | -0.8142 | |
| 87 | A | A | 0.0000 | |
| 88 | H | A | -0.7676 | |
| 89 | T | A | 0.0000 | |
| 90 | V | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | E | A | -1.7731 | |
| 93 | S | A | -1.3635 | |
| 94 | A | A | -1.4269 | |
| 95 | N | A | -2.5616 | |
| 96 | N | A | -2.7017 | |
| 97 | S | A | -2.3792 | |
| 98 | N | A | -2.4940 | |
| 99 | H | A | -2.0404 | |
| 100 | R | A | -3.0240 | |
| 101 | V | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | V | A | 0.0000 | |
| 104 | A | A | 0.0000 | |
| 105 | R | A | -0.5959 | |
| 106 | L | A | -0.1060 | |
| 107 | P | A | 0.0000 | |
| 108 | T | A | 0.0000 | |
| 109 | G | A | 0.0000 | |
| 110 | I | A | 0.0000 | |
| 111 | T | A | -1.0993 | |
| 112 | R | A | -2.0095 | |
| 113 | G | A | -1.7196 | |
| 114 | N | A | -1.9426 | |
| 115 | K | A | -2.3707 | |
| 116 | V | A | 0.0000 | |
| 117 | F | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | G | A | 0.0000 | |
| 122 | S | A | -0.8116 | |
| 123 | Y | A | -1.1082 | |
| 124 | E | A | -2.0163 | |
| 125 | E | A | -2.1869 | |
| 126 | R | A | -2.2870 | |
| 127 | R | A | -1.2732 | |
| 128 | E | A | -0.9683 | |
| 129 | I | A | 0.5502 | |
| 130 | D | A | -1.4467 | |
| 131 | D | A | -1.3557 | |
| 132 | Y | A | 0.7069 | |
| 133 | I | A | 0.4553 | |
| 134 | W | A | -0.5239 | |
| 135 | K | A | -1.5686 | |
| 136 | A | A | -1.6248 | |
| 137 | E | A | -2.2888 | |
| 138 | A | A | -1.1835 | |
| 139 | W | A | -1.3107 | |
| 140 | N | A | -1.6484 | |
| 141 | I | A | 0.0000 | |
| 142 | K | A | -1.0357 | |
| 143 | V | A | 0.0000 | |
| 144 | I | A | 0.0000 | |
| 145 | E | A | -1.6444 | |
| 146 | G | A | 0.0000 | |
| 147 | E | A | -2.4282 | |
| 148 | A | A | 0.0000 | |
| 149 | T | A | -1.6607 | |
| 150 | Q | A | -1.7659 | |
| 151 | S | A | -1.2628 | |
| 152 | T | A | -1.0176 | |
| 153 | E | A | -1.6332 | |
| 154 | V | A | 0.2864 | |
| 155 | Q | A | -1.0838 | |
| 156 | P | A | -1.0622 | |
| 157 | T | A | -0.6299 | |
| 158 | Q | A | -0.8419 | |
| 159 | P | A | 0.0000 | |
| 160 | I | A | 0.0000 | |
| 161 | N | A | -1.8362 | |
| 162 | W | A | -1.6329 | |
| 163 | S | A | -1.7013 | |
| 164 | E | A | -2.1772 | |
| 165 | P | A | -1.4635 | |
| 166 | K | A | -1.5400 | |
| 167 | P | A | -1.1592 | |
| 168 | L | A | 0.0000 | |
| 169 | F | A | -1.3767 | |
| 170 | Q | A | -2.1096 | |
| 171 | T | A | -1.6081 | |
| 172 | D | A | -2.4903 | |
| 173 | S | A | -2.4749 | |
| 174 | P | A | -2.4781 | |
| 175 | N | A | -3.7257 | |
| 176 | N | A | -3.2196 | |
| 177 | K | A | -3.4329 | |
| 178 | G | A | -3.2291 | |
| 179 | D | A | -4.0865 | |
| 180 | L | A | -3.3044 | |
| 181 | K | A | -3.2903 | |
| 182 | E | A | -2.2964 | |
| 183 | F | A | 0.0000 | |
| 184 | L | A | -0.2356 | |
| 185 | G | A | 0.0000 | |
| 186 | G | A | 0.0000 | |
| 187 | G | A | 0.0000 | |
| 188 | G | A | 0.0000 | |
| 189 | S | A | 0.1339 | |
| 190 | G | A | 0.0000 | |
| 191 | I | A | 0.3914 | |
| 192 | V | A | 0.2862 | |
| 193 | M | A | 0.0000 | |
| 194 | G | A | -1.5756 | |
| 195 | N | A | -1.7234 | |
| 196 | G | A | -1.1423 | |
| 197 | T | A | 0.0000 | |
| 198 | L | A | 0.0000 | |
| 199 | V | A | 0.0000 | |
| 200 | F | A | 0.0000 | |
| 201 | P | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | A | A | 0.0000 | |
| 205 | K | A | -2.3451 | |
| 206 | D | A | -3.3240 | |
| 207 | E | A | -3.7163 | |
| 208 | S | A | -2.4552 | |
| 209 | N | A | -3.0732 | |
| 210 | K | A | -2.1201 | |
| 211 | V | A | 0.0000 | |
| 212 | F | A | 0.0236 | |
| 213 | S | A | 0.0000 | |
| 214 | L | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | T | A | 0.0000 | |
| 217 | Y | A | -0.6809 | |
| 218 | S | A | 0.0000 | |
| 219 | T | A | -1.6590 | |
| 220 | D | A | -2.0788 | |
| 221 | D | A | -2.7428 | |
| 222 | G | A | 0.0000 | |
| 223 | Q | A | -2.6913 | |
| 224 | K | A | -3.1080 | |
| 225 | W | A | -2.0881 | |
| 226 | E | A | -2.0623 | |
| 227 | I | A | -1.0811 | |
| 228 | P | A | 0.0000 | |
| 229 | G | A | -1.7831 | |
| 230 | G | A | 0.0000 | |
| 231 | V | A | 0.5345 | |
| 232 | S | A | 0.0000 | |
| 233 | S | A | 0.1022 | |
| 234 | V | A | 0.6905 | |
| 235 | A | A | -0.7299 | |
| 236 | C | A | 0.0000 | |
| 237 | R | A | -0.9477 | |
| 238 | S | A | -0.5394 | |
| 239 | P | A | 0.0000 | |
| 240 | R | A | -0.2552 | |
| 241 | V | A | 0.0000 | |
| 242 | T | A | 0.0000 | |
| 243 | E | A | -0.9651 | |
| 244 | W | A | -1.5695 | |
| 245 | E | A | -3.1162 | |
| 246 | E | A | -3.3249 | |
| 247 | G | A | -2.4349 | |
| 248 | T | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | L | A | 0.0000 | |
| 251 | M | A | 0.0000 | |
| 252 | V | A | 0.0000 | |
| 253 | T | A | 0.0000 | |
| 254 | Y | A | -1.2989 | |
| 255 | C | A | 0.0000 | |
| 256 | E | A | -2.9518 | |
| 257 | D | A | -3.2392 | |
| 258 | G | A | 0.0000 | |
| 259 | R | A | 0.0000 | |
| 260 | K | A | -0.8515 | |
| 261 | V | A | 0.0000 | |
| 262 | F | A | 0.0000 | |
| 263 | E | A | -0.9455 | |
| 264 | S | A | 0.0000 | |
| 265 | R | A | -2.8804 | |
| 266 | D | A | -1.8938 | |
| 267 | M | A | -1.0990 | |
| 268 | G | A | 0.0000 | |
| 269 | K | A | -2.0792 | |
| 270 | T | A | -1.2861 | |
| 271 | W | A | -0.9115 | |
| 272 | T | A | -0.5759 | |
| 273 | E | A | -0.7368 | |
| 274 | A | A | 0.1019 | |
| 275 | F | A | 1.3224 | |
| 276 | G | A | 0.0877 | |
| 277 | T | A | -0.2551 | |
| 278 | L | A | 0.0000 | |
| 279 | P | A | -0.4719 | |
| 280 | G | A | 0.0347 | |
| 281 | V | A | 0.0000 | |
| 282 | W | A | 0.0652 | |
| 283 | L | A | -0.9060 | |
| 284 | K | A | -2.3573 | |
| 285 | S | A | -2.2684 | |
| 286 | G | A | -1.7017 | |
| 287 | P | A | -1.3126 | |
| 288 | E | A | -2.0850 | |
| 289 | L | A | -1.4711 | |
| 290 | P | A | -1.4625 | |
| 291 | E | A | -2.4629 | |
| 292 | K | A | -2.0983 | |
| 293 | S | A | -1.2738 | |
| 294 | L | A | 0.0000 | |
| 295 | R | A | -1.1135 | |
| 296 | V | A | 0.0000 | |
| 297 | D | A | 0.0000 | |
| 298 | A | A | 0.0000 | |
| 299 | L | A | 0.0000 | |
| 300 | I | A | 0.2847 | |
| 301 | T | A | -0.0167 | |
| 302 | A | A | -0.7863 | |
| 303 | T | A | -1.6634 | |
| 304 | I | A | -1.8320 | |
| 305 | E | A | -2.7810 | |
| 306 | G | A | -2.3609 | |
| 307 | R | A | -2.9976 | |
| 308 | K | A | -2.3899 | |
| 309 | V | A | 0.0000 | |
| 310 | M | A | 0.0000 | |
| 311 | L | A | 0.0000 | |
| 312 | Y | A | 0.0000 | |
| 313 | T | A | 0.0000 | |
| 314 | Q | A | 0.0000 | |
| 315 | K | A | 0.0000 | |
| 316 | V | A | 0.1045 | |
| 317 | R | A | -0.8352 | |
| 318 | H | A | -1.2635 | |
| 319 | F | A | 0.0823 | |
| 320 | K | A | -1.9850 | |
| 321 | E | A | -2.4065 | |
| 322 | V | A | -0.3874 | |
| 323 | D | A | -2.2327 | |
| 324 | E | A | -2.1871 | |
| 325 | P | A | -1.1205 | |
| 326 | N | A | 0.0000 | |
| 327 | A | A | 0.0000 | |
| 328 | L | A | 0.0000 | |
| 329 | H | A | 0.0000 | |
| 330 | L | A | 0.0000 | |
| 331 | W | A | 0.3800 | |
| 332 | V | A | 0.0000 | |
| 333 | T | A | 0.0000 | |
| 334 | D | A | -1.7825 | |
| 335 | N | A | -2.0336 | |
| 336 | N | A | -2.6176 | |
| 337 | R | A | -2.3043 | |
| 338 | T | A | -0.6837 | |
| 339 | F | A | 1.1773 | |
| 340 | H | A | 0.2029 | |
| 341 | L | A | 0.5979 | |
| 342 | G | A | 0.0963 | |
| 343 | P | A | 0.3708 | |
| 344 | F | A | 1.3564 | |
| 345 | S | A | 0.0000 | |
| 346 | V | A | 0.7642 | |
| 347 | D | A | 0.0000 | |
| 348 | S | A | -1.1887 | |
| 349 | A | A | -1.4151 | |
| 350 | E | A | -2.7826 | |
| 351 | N | A | -2.2791 | |
| 352 | K | A | -1.7364 | |
| 353 | T | A | 0.0000 | |
| 354 | F | A | -0.0834 | |
| 355 | A | A | 0.1579 | |
| 356 | N | A | 0.0000 | |
| 357 | T | A | 0.0000 | |
| 358 | L | A | 0.0000 | |
| 359 | L | A | 0.0036 | |
| 360 | Y | A | -0.4312 | |
| 361 | S | A | -1.2333 | |
| 362 | D | A | -2.8593 | |
| 363 | D | A | -2.6970 | |
| 364 | A | A | -1.5704 | |
| 365 | L | A | -0.8057 | |
| 366 | H | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | L | A | 0.0000 | |
| 369 | Q | A | 0.0000 | |
| 370 | A | A | 0.0000 | |
| 371 | K | A | -1.0593 | |
| 372 | G | A | 0.0000 | |
| 373 | D | A | -2.7520 | |
| 374 | H | A | -2.5835 | |
| 375 | E | A | -2.6488 | |
| 376 | S | A | -2.1111 | |
| 377 | T | A | 0.0000 | |
| 378 | A | A | -0.2380 | |
| 379 | V | A | 0.0000 | |
| 380 | S | A | 0.3969 | |
| 381 | L | A | 0.0000 | |
| 382 | A | A | -0.1501 | |
| 383 | R | A | -1.4249 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine