| Chain sequence(s) |
A: ETVIMKYLLPTAAAGLLLLAAQPAMAQVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRAAAEQKLISEEDLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:06)
[INFO] Main: Simulation completed successfully. (00:03:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.4496 | |
| 2 | T | A | 0.5312 | |
| 3 | V | A | 2.3929 | |
| 4 | I | A | 3.0796 | |
| 5 | M | A | 2.2040 | |
| 6 | K | A | 0.7251 | |
| 7 | Y | A | 2.1047 | |
| 8 | L | A | 2.5566 | |
| 9 | L | A | 2.3168 | |
| 10 | P | A | 1.0226 | |
| 11 | T | A | 0.4208 | |
| 12 | A | A | 0.1231 | |
| 13 | A | A | 0.1174 | |
| 14 | A | A | 0.4870 | |
| 15 | G | A | 1.0021 | |
| 16 | L | A | 2.7210 | |
| 17 | L | A | 3.3738 | |
| 18 | L | A | 3.4538 | |
| 19 | L | A | 2.8114 | |
| 20 | A | A | 1.1487 | |
| 21 | A | A | 0.1179 | |
| 22 | Q | A | -0.8634 | |
| 23 | P | A | -0.4683 | |
| 24 | A | A | -0.0513 | |
| 25 | M | A | 0.5326 | |
| 26 | A | A | -0.2380 | |
| 27 | Q | A | -1.2297 | |
| 28 | V | A | -1.1057 | |
| 29 | K | A | -2.1254 | |
| 30 | L | A | 0.0000 | |
| 31 | Q | A | -1.5604 | |
| 32 | Q | A | 0.0000 | |
| 33 | S | A | -0.9014 | |
| 34 | G | A | -0.8928 | |
| 35 | A | A | -0.1979 | |
| 36 | E | A | -0.3389 | |
| 37 | L | A | 0.8240 | |
| 38 | V | A | -0.3665 | |
| 39 | R | A | -1.8496 | |
| 40 | S | A | -1.7788 | |
| 41 | G | A | -1.2142 | |
| 42 | T | A | -0.9107 | |
| 43 | S | A | -1.0948 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -1.9912 | |
| 46 | L | A | 0.0000 | |
| 47 | S | A | -0.6341 | |
| 48 | C | A | 0.0000 | |
| 49 | T | A | -0.7832 | |
| 50 | A | A | 0.0000 | |
| 51 | S | A | -1.3214 | |
| 52 | G | A | -0.8636 | |
| 53 | F | A | -1.2323 | |
| 54 | N | A | -1.9540 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | -2.9446 | |
| 57 | D | A | -2.7984 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -0.8949 | |
| 60 | M | A | 0.0000 | |
| 61 | H | A | 0.0000 | |
| 62 | W | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | R | A | -0.4482 | |
| 65 | Q | A | -0.9532 | |
| 66 | G | A | -1.5022 | |
| 67 | P | A | -1.7242 | |
| 68 | E | A | -2.5677 | |
| 69 | Q | A | -2.3271 | |
| 70 | G | A | -1.2177 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -0.6788 | |
| 73 | W | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | W | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | D | A | 0.0000 | |
| 79 | P | A | 0.0000 | |
| 80 | E | A | -3.4322 | |
| 81 | N | A | -3.0157 | |
| 82 | G | A | -2.4889 | |
| 83 | D | A | -2.8072 | |
| 84 | T | A | -1.4207 | |
| 85 | E | A | -0.9871 | |
| 86 | Y | A | -0.7404 | |
| 87 | A | A | 0.0000 | |
| 88 | P | A | -1.8908 | |
| 89 | K | A | -2.4316 | |
| 90 | F | A | 0.0000 | |
| 91 | Q | A | -2.1115 | |
| 92 | G | A | -1.5056 | |
| 93 | K | A | -1.4471 | |
| 94 | A | A | 0.0000 | |
| 95 | T | A | -0.8051 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -0.5235 | |
| 98 | T | A | -0.7975 | |
| 99 | D | A | -0.9198 | |
| 100 | T | A | -1.2477 | |
| 101 | S | A | -0.7143 | |
| 102 | S | A | -0.7323 | |
| 103 | N | A | -0.9646 | |
| 104 | T | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | Y | A | -0.4759 | |
| 107 | L | A | 0.0000 | |
| 108 | Q | A | -1.4118 | |
| 109 | L | A | 0.0000 | |
| 110 | S | A | -0.9272 | |
| 111 | S | A | -0.8527 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | -1.4335 | |
| 114 | S | A | -1.5058 | |
| 115 | E | A | -1.9825 | |
| 116 | D | A | 0.0000 | |
| 117 | T | A | -0.6138 | |
| 118 | A | A | 0.0000 | |
| 119 | V | A | 0.0783 | |
| 120 | Y | A | 0.0000 | |
| 121 | Y | A | 0.0000 | |
| 122 | C | A | 0.0000 | |
| 123 | N | A | 0.0000 | |
| 124 | E | A | -0.4273 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | -0.4535 | |
| 127 | P | A | -0.4058 | |
| 128 | T | A | -0.1505 | |
| 129 | G | A | -0.0291 | |
| 130 | P | A | 0.1069 | |
| 131 | Y | A | 0.4407 | |
| 132 | Y | A | 0.0000 | |
| 133 | F | A | 0.0000 | |
| 134 | D | A | -0.6711 | |
| 135 | Y | A | -0.4682 | |
| 136 | W | A | -0.7697 | |
| 137 | G | A | 0.0000 | |
| 138 | Q | A | -1.4486 | |
| 139 | G | A | -0.7181 | |
| 140 | T | A | 0.0000 | |
| 141 | T | A | -0.0872 | |
| 142 | V | A | 0.0000 | |
| 143 | T | A | -0.1672 | |
| 144 | V | A | 0.0000 | |
| 145 | S | A | -0.7751 | |
| 146 | S | A | -1.1751 | |
| 147 | G | A | -1.3076 | |
| 148 | G | A | -1.1713 | |
| 149 | G | A | -1.1044 | |
| 150 | G | A | -1.2035 | |
| 151 | S | A | -0.9962 | |
| 152 | G | A | -1.1663 | |
| 153 | G | A | -1.1799 | |
| 154 | G | A | -1.1653 | |
| 155 | G | A | -1.3846 | |
| 156 | S | A | -1.1978 | |
| 157 | G | A | -1.4480 | |
| 158 | G | A | -1.4661 | |
| 159 | G | A | -1.2598 | |
| 160 | G | A | -1.2565 | |
| 161 | S | A | -0.9325 | |
| 162 | E | A | -0.9958 | |
| 163 | N | A | -0.0976 | |
| 164 | V | A | 1.2347 | |
| 165 | L | A | 0.0000 | |
| 166 | T | A | 0.2365 | |
| 167 | Q | A | 0.0000 | |
| 168 | S | A | 0.0060 | |
| 169 | P | A | 0.3370 | |
| 170 | A | A | 0.6978 | |
| 171 | I | A | 1.3706 | |
| 172 | M | A | 0.2565 | |
| 173 | S | A | -1.1388 | |
| 174 | A | A | 0.0000 | |
| 175 | S | A | -2.1938 | |
| 176 | P | A | -2.0670 | |
| 177 | G | A | -2.4172 | |
| 178 | E | A | -3.2608 | |
| 179 | K | A | -3.3512 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | -0.4804 | |
| 182 | I | A | 0.0000 | |
| 183 | T | A | -0.2589 | |
| 184 | C | A | 0.0000 | |
| 185 | S | A | -0.1696 | |
| 186 | A | A | 0.0000 | |
| 187 | S | A | -0.0882 | |
| 188 | S | A | -0.3908 | |
| 189 | S | A | -0.4605 | |
| 190 | V | A | 0.0000 | |
| 191 | S | A | 0.0370 | |
| 192 | Y | A | 0.7104 | |
| 193 | M | A | 0.0000 | |
| 194 | H | A | 0.0000 | |
| 195 | W | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | Q | A | 0.0000 | |
| 198 | Q | A | 0.0000 | |
| 199 | K | A | -1.4914 | |
| 200 | P | A | -0.8595 | |
| 201 | G | A | -0.8997 | |
| 202 | T | A | -0.9972 | |
| 203 | S | A | -0.8187 | |
| 204 | P | A | 0.0000 | |
| 205 | K | A | -1.3764 | |
| 206 | L | A | 0.0000 | |
| 207 | W | A | -0.4042 | |
| 208 | I | A | 0.0000 | |
| 209 | Y | A | 0.2075 | |
| 210 | S | A | 0.2172 | |
| 211 | T | A | 0.0000 | |
| 212 | S | A | -0.3991 | |
| 213 | N | A | -0.6467 | |
| 214 | L | A | -0.0242 | |
| 215 | A | A | 0.0000 | |
| 216 | S | A | -0.4995 | |
| 217 | G | A | -0.4826 | |
| 218 | V | A | 0.0000 | |
| 219 | P | A | -0.2403 | |
| 220 | A | A | -0.1998 | |
| 221 | R | A | -1.2834 | |
| 222 | F | A | 0.0000 | |
| 223 | S | A | -0.4146 | |
| 224 | G | A | 0.0000 | |
| 225 | S | A | -0.5097 | |
| 226 | G | A | -0.5225 | |
| 227 | S | A | -0.4442 | |
| 228 | G | A | -0.4630 | |
| 229 | T | A | -0.4697 | |
| 230 | S | A | -0.5980 | |
| 231 | Y | A | 0.0000 | |
| 232 | S | A | -0.3504 | |
| 233 | L | A | 0.0000 | |
| 234 | T | A | -0.8048 | |
| 235 | I | A | 0.0000 | |
| 236 | S | A | -2.2595 | |
| 237 | R | A | -3.4810 | |
| 238 | M | A | 0.0000 | |
| 239 | E | A | -2.4777 | |
| 240 | A | A | -1.6060 | |
| 241 | E | A | -2.2757 | |
| 242 | D | A | 0.0000 | |
| 243 | A | A | -1.5622 | |
| 244 | A | A | 0.0000 | |
| 245 | T | A | 0.0000 | |
| 246 | Y | A | 0.0000 | |
| 247 | Y | A | 0.0000 | |
| 248 | C | A | 0.0000 | |
| 249 | Q | A | 0.0000 | |
| 250 | Q | A | 0.0000 | |
| 251 | R | A | -0.1764 | |
| 252 | S | A | -0.1473 | |
| 253 | S | A | -0.2612 | |
| 254 | Y | A | 0.2241 | |
| 255 | P | A | -0.1434 | |
| 256 | L | A | 0.0000 | |
| 257 | T | A | 0.1994 | |
| 258 | F | A | 0.3265 | |
| 259 | G | A | 0.0000 | |
| 260 | A | A | -0.5824 | |
| 261 | G | A | 0.0000 | |
| 262 | T | A | 0.0000 | |
| 263 | K | A | -0.6483 | |
| 264 | L | A | 0.0000 | |
| 265 | E | A | -1.8448 | |
| 266 | L | A | -1.6467 | |
| 267 | K | A | -2.6357 | |
| 268 | R | A | -2.6259 | |
| 269 | A | A | -1.4539 | |
| 270 | A | A | -1.3613 | |
| 271 | A | A | -1.7162 | |
| 272 | E | A | -2.6666 | |
| 273 | Q | A | -2.2112 | |
| 274 | K | A | -1.7250 | |
| 275 | L | A | 0.4361 | |
| 276 | I | A | 0.4080 | |
| 277 | S | A | -1.0185 | |
| 278 | E | A | -2.5307 | |
| 279 | E | A | -3.2346 | |
| 280 | D | A | -2.6011 | |
| 281 | L | A | -0.8587 | |
| 282 | N | A | -1.8175 |