| Chain sequence(s) |
A: FFGHKGG
C: FFGHKGG B: FFGHKGG E: FFGHKGG D: FFGHKGG G: FFGHKGG F: FFGHKGG I: FFGHKGG H: FFGHKGG K: FFGHKGG J: FFGHKGG L: FFGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 3.3886 | |
| 2 | F | A | 0.0000 | |
| 3 | G | A | -0.8961 | |
| 4 | H | A | -2.2551 | |
| 5 | K | A | -3.4435 | |
| 6 | G | A | -2.3259 | |
| 7 | G | A | -1.7559 | |
| 1 | F | B | 0.0000 | |
| 2 | F | B | 1.7610 | |
| 3 | G | B | -0.8931 | |
| 4 | H | B | -2.5356 | |
| 5 | K | B | -3.5240 | |
| 6 | G | B | -2.5682 | |
| 7 | G | B | -1.6468 | |
| 1 | F | C | 2.5852 | |
| 2 | F | C | 1.4334 | |
| 3 | G | C | -1.2604 | |
| 4 | H | C | -2.4478 | |
| 5 | K | C | -3.3869 | |
| 6 | G | C | -2.1717 | |
| 7 | G | C | -1.5253 | |
| 1 | F | D | 2.6974 | |
| 2 | F | D | 1.9044 | |
| 3 | G | D | -0.5557 | |
| 4 | H | D | -2.0528 | |
| 5 | K | D | -3.0859 | |
| 6 | G | D | -1.8542 | |
| 7 | G | D | -1.3086 | |
| 1 | F | E | 2.9420 | |
| 2 | F | E | 1.7219 | |
| 3 | G | E | -0.6141 | |
| 4 | H | E | -2.4128 | |
| 5 | K | E | -3.3308 | |
| 6 | G | E | -2.0680 | |
| 7 | G | E | -1.5758 | |
| 1 | F | F | 3.1632 | |
| 2 | F | F | 0.0000 | |
| 3 | G | F | -0.8847 | |
| 4 | H | F | -2.5445 | |
| 5 | K | F | -3.6119 | |
| 6 | G | F | -2.4926 | |
| 7 | G | F | -1.7043 | |
| 1 | F | G | 2.8636 | |
| 2 | F | G | 1.8728 | |
| 3 | G | G | -0.9142 | |
| 4 | H | G | -2.1405 | |
| 5 | K | G | -3.4139 | |
| 6 | G | G | -2.4326 | |
| 7 | G | G | -1.6749 | |
| 1 | F | H | 0.0000 | |
| 2 | F | H | 1.7445 | |
| 3 | G | H | -0.8870 | |
| 4 | H | H | -2.1679 | |
| 5 | K | H | -3.3192 | |
| 6 | G | H | -2.3452 | |
| 7 | G | H | -1.5853 | |
| 1 | F | I | 2.6401 | |
| 2 | F | I | 1.7285 | |
| 3 | G | I | -0.7327 | |
| 4 | H | I | -2.0813 | |
| 5 | K | I | -3.1487 | |
| 6 | G | I | -1.9451 | |
| 7 | G | I | -1.2933 | |
| 1 | F | J | 3.1125 | |
| 2 | F | J | 2.2939 | |
| 3 | G | J | -0.4078 | |
| 4 | H | J | -1.7391 | |
| 5 | K | J | -2.9529 | |
| 6 | G | J | -1.9445 | |
| 7 | G | J | -1.4854 | |
| 1 | F | K | 3.4369 | |
| 2 | F | K | 2.3244 | |
| 3 | G | K | -0.0444 | |
| 4 | H | K | -1.6515 | |
| 5 | K | K | -3.1139 | |
| 6 | G | K | -2.0273 | |
| 7 | G | K | -1.4381 | |
| 1 | F | L | 3.5227 | |
| 2 | F | L | 2.2430 | |
| 3 | G | L | -0.1182 | |
| 4 | H | L | -2.0819 | |
| 5 | K | L | -3.1770 | |
| 6 | G | L | -2.0341 | |
| 7 | G | L | -1.4687 |