Project name: FFGHKGG12

Status: done

Started: 2026-05-21 13:58:16
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Chain sequence(s) A: FFGHKGG
C: FFGHKGG
B: FFGHKGG
E: FFGHKGG
D: FFGHKGG
G: FFGHKGG
F: FFGHKGG
I: FFGHKGG
H: FFGHKGG
K: FFGHKGG
J: FFGHKGG
L: FFGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:44)
Show buried residues

Minimal score value
-3.6119
Maximal score value
3.5227
Average score
-0.8229
Total score value
-69.1196

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 3.3886
2 F A 0.0000
3 G A -0.8961
4 H A -2.2551
5 K A -3.4435
6 G A -2.3259
7 G A -1.7559
1 F B 0.0000
2 F B 1.7610
3 G B -0.8931
4 H B -2.5356
5 K B -3.5240
6 G B -2.5682
7 G B -1.6468
1 F C 2.5852
2 F C 1.4334
3 G C -1.2604
4 H C -2.4478
5 K C -3.3869
6 G C -2.1717
7 G C -1.5253
1 F D 2.6974
2 F D 1.9044
3 G D -0.5557
4 H D -2.0528
5 K D -3.0859
6 G D -1.8542
7 G D -1.3086
1 F E 2.9420
2 F E 1.7219
3 G E -0.6141
4 H E -2.4128
5 K E -3.3308
6 G E -2.0680
7 G E -1.5758
1 F F 3.1632
2 F F 0.0000
3 G F -0.8847
4 H F -2.5445
5 K F -3.6119
6 G F -2.4926
7 G F -1.7043
1 F G 2.8636
2 F G 1.8728
3 G G -0.9142
4 H G -2.1405
5 K G -3.4139
6 G G -2.4326
7 G G -1.6749
1 F H 0.0000
2 F H 1.7445
3 G H -0.8870
4 H H -2.1679
5 K H -3.3192
6 G H -2.3452
7 G H -1.5853
1 F I 2.6401
2 F I 1.7285
3 G I -0.7327
4 H I -2.0813
5 K I -3.1487
6 G I -1.9451
7 G I -1.2933
1 F J 3.1125
2 F J 2.2939
3 G J -0.4078
4 H J -1.7391
5 K J -2.9529
6 G J -1.9445
7 G J -1.4854
1 F K 3.4369
2 F K 2.3244
3 G K -0.0444
4 H K -1.6515
5 K K -3.1139
6 G K -2.0273
7 G K -1.4381
1 F L 3.5227
2 F L 2.2430
3 G L -0.1182
4 H L -2.0819
5 K L -3.1770
6 G L -2.0341
7 G L -1.4687
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Laboratory of Theory of Biopolymers 2018