Project name: query_structure

Status: done

Started: 2026-03-17 01:15:20
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDATGYYVRYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAQSGPYYWYWGDSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-3.1997
Maximal score value
2.5808
Average score
-0.3842
Total score value
-36.1157

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7235
2 S A 0.6241
3 D A 0.1967
4 V A -0.6663
5 P A 0.0000
6 R A -2.7991
7 D A -3.1997
8 L A 0.0000
9 E A -2.0809
10 V A 0.0687
11 V A 1.5150
12 A A 0.8759
13 A A 0.2852
14 T A -0.5347
15 P A -1.1286
16 T A -0.9998
17 S A -0.5433
18 L A 0.0000
19 L A 0.6960
20 I A 0.0000
21 S A -0.8907
22 W A 0.0000
23 D A -2.8346
24 A A -1.0375
25 T A -0.3457
26 G A 0.4857
27 Y A 1.7151
28 Y A 1.4804
29 V A 0.0364
30 R A -1.4071
31 Y A -0.6799
32 Y A 0.0000
33 R A -1.0653
34 I A 0.0000
35 T A 0.0000
36 Y A -0.2300
37 G A 0.0000
38 E A -1.4569
39 T A -1.2075
40 G A -1.2101
41 G A -1.3307
42 N A -1.5051
43 S A -0.7758
44 P A -0.2703
45 V A 0.5057
46 Q A -0.7421
47 E A -1.6054
48 F A -0.6850
49 T A -0.3716
50 V A 0.0000
51 P A -0.7484
52 G A -0.5575
53 S A -0.3251
54 S A -0.5902
55 S A -0.6984
56 T A -0.2571
57 A A 0.0000
58 T A 0.2784
59 I A 0.0000
60 S A -0.6639
61 G A -1.0321
62 L A 0.0000
63 K A -2.3537
64 P A -1.6503
65 G A -1.4259
66 V A -1.3980
67 D A -2.0226
68 Y A 0.0000
69 T A -0.7558
70 I A 0.0000
71 T A -0.2405
72 V A 0.0000
73 Y A -0.5306
74 A A 0.0000
75 Q A -0.8888
76 S A 0.3493
77 G A 0.2583
78 P A 0.5546
79 Y A 2.0806
80 Y A 2.4596
81 W A 2.5808
82 Y A 2.5503
83 W A 1.5886
84 G A 0.0050
85 D A -1.2129
86 S A -0.6924
87 P A -0.7404
88 I A -0.3838
89 S A -0.3897
90 I A -0.7287
91 N A -1.7040
92 Y A -1.4365
93 R A -2.5007
94 T A -1.4979
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Laboratory of Theory of Biopolymers 2018