Project name: bc20f633fe51b7d

Status: done

Started: 2026-06-22 19:23:19
Settings
Chain sequence(s) B: MMDEIMKKTEEIKKLMKEAYEALKKDPEEAEKKLKEVKKAMKELKKLIEK
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:39)
Show buried residues

Minimal score value
-4.1029
Maximal score value
0.7303
Average score
-2.4009
Total score value
-120.0455

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 0.7303
2 M B 0.5037
3 D B -1.8871
4 E B -2.0020
5 I B -1.0119
6 M B -1.2909
7 K B -3.3107
8 K B -2.8650
9 T B -2.4444
10 E B -3.8538
11 E B -3.5727
12 I B 0.0000
13 K B -4.0218
14 K B -3.9721
15 L B -3.2215
16 M B -2.3172
17 K B -2.9853
18 E B -2.8920
19 A B 0.0000
20 Y B -1.0761
21 E B -2.5812
22 A B 0.0000
23 L B -1.8129
24 K B -2.7431
25 K B -3.2381
26 D B -3.1653
27 P B -2.8243
28 E B -3.6808
29 E B -3.9382
30 A B 0.0000
31 E B -3.6597
32 K B -4.0148
33 K B -3.5400
34 L B -2.6751
35 K B -4.0147
36 E B -3.7243
37 V B 0.0000
38 K B -3.6625
39 K B -4.1029
40 A B 0.0000
41 M B -2.7691
42 K B -3.6986
43 E B -3.1158
44 L B -2.5390
45 K B -3.1318
46 K B -3.1586
47 L B -1.4573
48 I B -0.3848
49 E B -2.6191
50 K B -2.3030
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Laboratory of Theory of Biopolymers 2018