| Chain sequence(s) |
B: MMDEIMKKTEEIKKLMKEAYEALKKDPEEAEKKLKEVKKAMKELKKLIEK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:39)
[INFO] Main: Simulation completed successfully. (00:02:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.7303 | |
| 2 | M | B | 0.5037 | |
| 3 | D | B | -1.8871 | |
| 4 | E | B | -2.0020 | |
| 5 | I | B | -1.0119 | |
| 6 | M | B | -1.2909 | |
| 7 | K | B | -3.3107 | |
| 8 | K | B | -2.8650 | |
| 9 | T | B | -2.4444 | |
| 10 | E | B | -3.8538 | |
| 11 | E | B | -3.5727 | |
| 12 | I | B | 0.0000 | |
| 13 | K | B | -4.0218 | |
| 14 | K | B | -3.9721 | |
| 15 | L | B | -3.2215 | |
| 16 | M | B | -2.3172 | |
| 17 | K | B | -2.9853 | |
| 18 | E | B | -2.8920 | |
| 19 | A | B | 0.0000 | |
| 20 | Y | B | -1.0761 | |
| 21 | E | B | -2.5812 | |
| 22 | A | B | 0.0000 | |
| 23 | L | B | -1.8129 | |
| 24 | K | B | -2.7431 | |
| 25 | K | B | -3.2381 | |
| 26 | D | B | -3.1653 | |
| 27 | P | B | -2.8243 | |
| 28 | E | B | -3.6808 | |
| 29 | E | B | -3.9382 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -3.6597 | |
| 32 | K | B | -4.0148 | |
| 33 | K | B | -3.5400 | |
| 34 | L | B | -2.6751 | |
| 35 | K | B | -4.0147 | |
| 36 | E | B | -3.7243 | |
| 37 | V | B | 0.0000 | |
| 38 | K | B | -3.6625 | |
| 39 | K | B | -4.1029 | |
| 40 | A | B | 0.0000 | |
| 41 | M | B | -2.7691 | |
| 42 | K | B | -3.6986 | |
| 43 | E | B | -3.1158 | |
| 44 | L | B | -2.5390 | |
| 45 | K | B | -3.1318 | |
| 46 | K | B | -3.1586 | |
| 47 | L | B | -1.4573 | |
| 48 | I | B | -0.3848 | |
| 49 | E | B | -2.6191 | |
| 50 | K | B | -2.3030 |