Chain sequence(s) |
A: GRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGDADNAGDGDGFNGGFGDDMDDKDDGWGM
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | DA114A,DA116A,DA136A,DA120A,DA131A,DA130A,DA137A,DA122A,DA134A |
Energy difference between WT (input) and mutated protein (by FoldX) | 4.6137 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:18) [INFO] FoldX: Starting FoldX energy minimalization (00:00:27) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43) [INFO] Main: Simulation completed successfully. (00:00:44) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.9329 | |
2 | R | A | -1.2059 | |
3 | F | A | 0.3776 | |
4 | G | A | -0.5276 | |
5 | G | A | -1.1742 | |
6 | N | A | -1.6886 | |
7 | P | A | -1.1999 | |
8 | G | A | -0.7249 | |
9 | G | A | -0.2771 | |
10 | F | A | 0.9198 | |
11 | G | A | -0.7564 | |
12 | N | A | -1.9362 | |
13 | Q | A | -1.8497 | |
14 | G | A | -1.2180 | |
15 | G | A | -0.5342 | |
16 | F | A | 0.8664 | |
17 | G | A | -0.7041 | |
18 | N | A | -1.8334 | |
19 | S | A | -1.7750 | |
20 | R | A | -2.8147 | |
21 | G | A | -1.9931 | |
22 | G | A | -1.4403 | |
23 | G | A | -0.9688 | |
24 | A | A | -0.2346 | |
25 | G | A | -0.2349 | |
26 | L | A | 0.5112 | |
27 | G | A | -1.0641 | |
28 | N | A | -2.1746 | |
29 | N | A | -2.7379 | |
30 | Q | A | -2.7060 | |
31 | G | A | -1.9537 | |
32 | S | A | -1.2787 | |
33 | N | A | -1.5297 | |
34 | M | A | -0.0126 | |
35 | G | A | -0.4885 | |
36 | G | A | -0.6976 | |
37 | G | A | -0.3977 | |
38 | M | A | 0.5538 | |
39 | N | A | 0.1356 | |
40 | F | A | 2.0581 | |
41 | G | A | 0.9157 | |
42 | A | A | 1.3142 | |
43 | F | A | 2.3530 | |
44 | S | A | 1.2067 | |
45 | I | A | 1.7873 | |
46 | N | A | -0.0119 | |
47 | P | A | 0.0739 | |
48 | A | A | 0.2483 | |
49 | M | A | 0.8055 | |
50 | M | A | 0.9175 | |
51 | A | A | 0.1892 | |
52 | A | A | 0.0964 | |
53 | A | A | -0.0064 | |
54 | Q | A | -0.8943 | |
55 | A | A | -0.5367 | |
56 | A | A | -0.1768 | |
57 | L | A | -0.1603 | |
58 | Q | A | -0.9542 | |
59 | S | A | -0.3068 | |
60 | S | A | 0.3049 | |
61 | W | A | 1.2172 | |
62 | G | A | 0.5019 | |
63 | M | A | 1.2471 | |
64 | M | A | 1.7715 | |
65 | G | A | 0.8540 | |
66 | M | A | 1.0793 | |
67 | L | A | 1.0983 | |
68 | A | A | -0.2351 | |
69 | S | A | -1.0335 | |
70 | Q | A | -1.9567 | |
71 | Q | A | -2.5006 | |
72 | N | A | -2.8311 | |
73 | Q | A | -2.9039 | |
74 | S | A | -2.1641 | |
75 | G | A | -1.6846 | |
76 | P | A | -1.1558 | |
77 | S | A | -1.4447 | |
78 | G | A | -1.9443 | |
79 | N | A | -2.7748 | |
80 | N | A | -3.2505 | |
81 | Q | A | -3.3482 | |
82 | N | A | -3.3878 | |
83 | Q | A | -2.8112 | |
84 | G | A | -2.1118 | |
85 | N | A | -2.0421 | |
86 | M | A | -1.2160 | |
87 | Q | A | -2.4647 | |
88 | R | A | -3.4264 | |
89 | E | A | -3.5632 | |
90 | P | A | -2.6246 | |
91 | N | A | -2.5325 | |
92 | Q | A | -1.6074 | |
93 | A | A | -0.1154 | |
94 | F | A | 1.1249 | |
95 | G | A | -0.1178 | |
96 | S | A | -0.7835 | |
97 | G | A | -1.4961 | |
98 | N | A | -2.1460 | |
99 | N | A | -1.7968 | |
100 | S | A | -0.7449 | |
101 | Y | A | 0.3302 | |
102 | S | A | -0.1226 | |
103 | G | A | -0.3680 | |
104 | S | A | -0.9028 | |
105 | N | A | -1.5693 | |
106 | S | A | -1.1235 | |
107 | G | A | -0.7397 | |
108 | A | A | 0.0995 | |
109 | A | A | 0.7435 | |
110 | I | A | 2.0219 | |
111 | G | A | 0.9962 | |
112 | W | A | 1.3017 | |
113 | G | A | 0.3083 | |
114 | A | A | -0.0518 | mutated: DA114A |
115 | A | A | -0.2063 | |
116 | A | A | -0.6319 | mutated: DA116A |
117 | N | A | -1.3058 | |
118 | A | A | -0.8044 | |
119 | G | A | -0.8062 | |
120 | A | A | -0.3711 | mutated: DA120A |
121 | G | A | -0.4073 | |
122 | A | A | -0.1709 | mutated: DA122A |
123 | G | A | 0.0925 | |
124 | F | A | 0.8543 | |
125 | N | A | -0.5702 | |
126 | G | A | -0.4152 | |
127 | G | A | 0.0317 | |
128 | F | A | 1.2465 | |
129 | G | A | 0.4821 | |
130 | A | A | 0.3902 | mutated: DA130A |
131 | A | A | 0.1796 | mutated: DA131A |
132 | M | A | -0.0513 | |
133 | D | A | -1.7011 | |
134 | A | A | -1.3029 | mutated: DA134A |
135 | K | A | -2.0668 | |
136 | A | A | -0.9466 | mutated: DA136A |
137 | A | A | -0.3615 | mutated: DA137A |
138 | G | A | -0.0812 | |
139 | W | A | 1.0088 | |
140 | G | A | 0.5014 | |
141 | M | A | 1.0545 |