Project name: a75a78570ecf8fe [mutate: SD137A, SD136A, SD134A, SD130A, SD131A, SD122A, SD120A, SD114A, SD116A] [mutate: DA114A, DA116A, DA120A, DA122A, DA130A, DA131A, DA134A, DA136A, DA137A]

Status: done

Started: 2025-07-18 05:09:37
Settings
Chain sequence(s) A: GRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGDADNAGDGDGFNGGFGDDMDDKDDGWGM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues DA114A,DA116A,DA136A,DA120A,DA131A,DA130A,DA137A,DA122A,DA134A
Energy difference between WT (input) and mutated protein (by FoldX) 4.6137 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:18)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:27)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-3.5632
Maximal score value
2.353
Average score
-0.6329
Total score value
-89.2353

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9329
2 R A -1.2059
3 F A 0.3776
4 G A -0.5276
5 G A -1.1742
6 N A -1.6886
7 P A -1.1999
8 G A -0.7249
9 G A -0.2771
10 F A 0.9198
11 G A -0.7564
12 N A -1.9362
13 Q A -1.8497
14 G A -1.2180
15 G A -0.5342
16 F A 0.8664
17 G A -0.7041
18 N A -1.8334
19 S A -1.7750
20 R A -2.8147
21 G A -1.9931
22 G A -1.4403
23 G A -0.9688
24 A A -0.2346
25 G A -0.2349
26 L A 0.5112
27 G A -1.0641
28 N A -2.1746
29 N A -2.7379
30 Q A -2.7060
31 G A -1.9537
32 S A -1.2787
33 N A -1.5297
34 M A -0.0126
35 G A -0.4885
36 G A -0.6976
37 G A -0.3977
38 M A 0.5538
39 N A 0.1356
40 F A 2.0581
41 G A 0.9157
42 A A 1.3142
43 F A 2.3530
44 S A 1.2067
45 I A 1.7873
46 N A -0.0119
47 P A 0.0739
48 A A 0.2483
49 M A 0.8055
50 M A 0.9175
51 A A 0.1892
52 A A 0.0964
53 A A -0.0064
54 Q A -0.8943
55 A A -0.5367
56 A A -0.1768
57 L A -0.1603
58 Q A -0.9542
59 S A -0.3068
60 S A 0.3049
61 W A 1.2172
62 G A 0.5019
63 M A 1.2471
64 M A 1.7715
65 G A 0.8540
66 M A 1.0793
67 L A 1.0983
68 A A -0.2351
69 S A -1.0335
70 Q A -1.9567
71 Q A -2.5006
72 N A -2.8311
73 Q A -2.9039
74 S A -2.1641
75 G A -1.6846
76 P A -1.1558
77 S A -1.4447
78 G A -1.9443
79 N A -2.7748
80 N A -3.2505
81 Q A -3.3482
82 N A -3.3878
83 Q A -2.8112
84 G A -2.1118
85 N A -2.0421
86 M A -1.2160
87 Q A -2.4647
88 R A -3.4264
89 E A -3.5632
90 P A -2.6246
91 N A -2.5325
92 Q A -1.6074
93 A A -0.1154
94 F A 1.1249
95 G A -0.1178
96 S A -0.7835
97 G A -1.4961
98 N A -2.1460
99 N A -1.7968
100 S A -0.7449
101 Y A 0.3302
102 S A -0.1226
103 G A -0.3680
104 S A -0.9028
105 N A -1.5693
106 S A -1.1235
107 G A -0.7397
108 A A 0.0995
109 A A 0.7435
110 I A 2.0219
111 G A 0.9962
112 W A 1.3017
113 G A 0.3083
114 A A -0.0518 mutated: DA114A
115 A A -0.2063
116 A A -0.6319 mutated: DA116A
117 N A -1.3058
118 A A -0.8044
119 G A -0.8062
120 A A -0.3711 mutated: DA120A
121 G A -0.4073
122 A A -0.1709 mutated: DA122A
123 G A 0.0925
124 F A 0.8543
125 N A -0.5702
126 G A -0.4152
127 G A 0.0317
128 F A 1.2465
129 G A 0.4821
130 A A 0.3902 mutated: DA130A
131 A A 0.1796 mutated: DA131A
132 M A -0.0513
133 D A -1.7011
134 A A -1.3029 mutated: DA134A
135 K A -2.0668
136 A A -0.9466 mutated: DA136A
137 A A -0.3615 mutated: DA137A
138 G A -0.0812
139 W A 1.0088
140 G A 0.5014
141 M A 1.0545
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Laboratory of Theory of Biopolymers 2018