| Chain sequence(s) |
A: GREEEILERARELRERAEEAIRFLDENADEPWAAGPLGQMLRDIAEAIIRIAEAVELLLEPPTEERVERALELIAEAWALALAAILELLLVKKVEVKRKQNGDDSPPTQEEIEAAREEAEKMREEFEKLLEEVKKEGPLTEVEHVLKLLEKFLKYLDKIIELAEELASIDPDNELAKNILEAAKKLKELFEKLIEELKKSPEWLLVLAETVLEAAETLYDLIVKPALEAYKA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6395 | |
| 2 | R | A | -1.3152 | |
| 3 | E | A | -2.1107 | |
| 4 | E | A | -2.4487 | |
| 5 | E | A | -2.1553 | |
| 6 | I | A | 0.0000 | |
| 7 | L | A | 0.1108 | |
| 8 | E | A | -1.8270 | |
| 9 | R | A | -0.8141 | |
| 10 | A | A | 0.0000 | |
| 11 | R | A | -2.2246 | |
| 12 | E | A | -2.1205 | |
| 13 | L | A | 0.0000 | |
| 14 | R | A | -1.0487 | |
| 15 | E | A | -2.0269 | |
| 16 | R | A | -0.9357 | |
| 17 | A | A | 0.0000 | |
| 18 | E | A | -0.9574 | |
| 19 | E | A | -1.9345 | |
| 20 | A | A | 0.0000 | |
| 21 | I | A | -0.0665 | |
| 22 | R | A | -1.6987 | |
| 23 | F | A | -0.1133 | |
| 24 | L | A | 0.0000 | |
| 25 | D | A | -1.8146 | |
| 26 | E | A | -2.1341 | |
| 27 | N | A | -0.5408 | |
| 28 | A | A | -0.4828 | |
| 29 | D | A | -1.9178 | |
| 30 | E | A | -1.1249 | |
| 31 | P | A | -0.3603 | |
| 32 | W | A | 0.1260 | |
| 33 | A | A | 0.0478 | |
| 34 | A | A | 0.0375 | |
| 35 | G | A | -0.1173 | |
| 36 | P | A | -0.0362 | |
| 37 | L | A | 0.1805 | |
| 38 | G | A | 0.0000 | |
| 39 | Q | A | -0.7558 | |
| 40 | M | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | R | A | -0.4060 | |
| 43 | D | A | -0.3462 | |
| 44 | I | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | E | A | -0.5071 | |
| 47 | A | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | I | A | 0.0075 | |
| 50 | R | A | -1.0042 | |
| 51 | I | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | E | A | -0.9245 | |
| 54 | A | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | E | A | -0.2287 | |
| 57 | L | A | 0.1995 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | 0.0411 | |
| 60 | E | A | -1.1219 | |
| 61 | P | A | -0.5059 | |
| 62 | P | A | -0.3089 | |
| 63 | T | A | -0.4225 | |
| 64 | E | A | -2.1404 | |
| 65 | E | A | -2.2210 | |
| 66 | R | A | -1.2774 | |
| 67 | V | A | 0.0000 | |
| 68 | E | A | 0.0000 | |
| 69 | R | A | -0.7806 | |
| 70 | A | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -0.2131 | |
| 73 | L | A | 0.6932 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | E | A | -0.8287 | |
| 77 | A | A | 0.0000 | |
| 78 | W | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | A | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | E | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | L | A | 0.0000 | |
| 90 | L | A | 0.1809 | |
| 91 | V | A | 0.0000 | |
| 92 | K | A | -0.2969 | |
| 93 | K | A | -0.3648 | |
| 94 | V | A | 0.2666 | |
| 95 | E | A | -0.1930 | |
| 96 | V | A | -0.0643 | |
| 97 | K | A | -1.0364 | |
| 98 | R | A | -0.6550 | |
| 99 | K | A | -0.9894 | |
| 100 | Q | A | -1.5620 | |
| 101 | N | A | -1.5478 | |
| 102 | G | A | -0.8346 | |
| 103 | D | A | -2.1503 | |
| 104 | D | A | -2.1386 | |
| 105 | S | A | -0.4944 | |
| 106 | P | A | -0.2774 | |
| 107 | P | A | 0.0000 | |
| 108 | T | A | -0.2701 | |
| 109 | Q | A | -1.5154 | |
| 110 | E | A | -2.1410 | |
| 111 | E | A | -0.8408 | |
| 112 | I | A | -0.1222 | |
| 113 | E | A | -0.8720 | |
| 114 | A | A | -0.0961 | |
| 115 | A | A | 0.0000 | |
| 116 | R | A | -1.4420 | |
| 117 | E | A | -2.2389 | |
| 118 | E | A | -1.1758 | |
| 119 | A | A | 0.0000 | |
| 120 | E | A | -1.2670 | |
| 121 | K | A | -1.8316 | |
| 122 | M | A | 0.0000 | |
| 123 | R | A | -0.6902 | |
| 124 | E | A | -1.4262 | |
| 125 | E | A | -1.0916 | |
| 126 | F | A | 0.0000 | |
| 127 | E | A | -0.6847 | |
| 128 | K | A | -1.7294 | |
| 129 | L | A | -0.1019 | |
| 130 | L | A | 0.0000 | |
| 131 | E | A | -2.1533 | |
| 132 | E | A | -2.1533 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | -1.4860 | |
| 135 | K | A | -2.2485 | |
| 136 | E | A | -2.1421 | |
| 137 | G | A | -0.4142 | |
| 138 | P | A | -0.1128 | |
| 139 | L | A | 0.0000 | |
| 140 | T | A | -0.1960 | |
| 141 | E | A | -0.9189 | |
| 142 | V | A | -0.1128 | |
| 143 | E | A | -1.6911 | |
| 144 | H | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | L | A | 0.0448 | |
| 147 | K | A | -0.6152 | |
| 148 | L | A | 0.0000 | |
| 149 | L | A | 0.0000 | |
| 150 | E | A | -1.3745 | |
| 151 | K | A | -0.7131 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | -0.2794 | |
| 154 | K | A | -1.6981 | |
| 155 | Y | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | D | A | -0.7189 | |
| 158 | K | A | -0.7954 | |
| 159 | I | A | 0.0000 | |
| 160 | I | A | -0.0948 | |
| 161 | E | A | -1.7464 | |
| 162 | L | A | -0.1797 | |
| 163 | A | A | 0.0000 | |
| 164 | E | A | -1.3085 | |
| 165 | E | A | -0.9650 | |
| 166 | L | A | 0.0000 | |
| 167 | A | A | -0.0561 | |
| 168 | S | A | -0.2021 | |
| 169 | I | A | 0.3352 | |
| 170 | D | A | -0.3898 | |
| 171 | P | A | -0.6588 | |
| 172 | D | A | -1.8607 | |
| 173 | N | A | -0.7977 | |
| 174 | E | A | -1.8092 | |
| 175 | L | A | -0.1392 | |
| 176 | A | A | 0.0000 | |
| 177 | K | A | -0.9069 | |
| 178 | N | A | -0.4634 | |
| 179 | I | A | 0.0000 | |
| 180 | L | A | -0.1179 | |
| 181 | E | A | -1.5410 | |
| 182 | A | A | 0.0000 | |
| 183 | A | A | 0.0000 | |
| 184 | K | A | -1.2358 | |
| 185 | K | A | -0.7695 | |
| 186 | L | A | 0.0000 | |
| 187 | K | A | -0.7958 | |
| 188 | E | A | -1.9046 | |
| 189 | L | A | 0.0000 | |
| 190 | F | A | 0.0000 | |
| 191 | E | A | -1.4575 | |
| 192 | K | A | -1.9107 | |
| 193 | L | A | 0.0000 | |
| 194 | I | A | -0.0831 | |
| 195 | E | A | -1.8551 | |
| 196 | E | A | -0.7774 | |
| 197 | L | A | 0.0000 | |
| 198 | K | A | -2.0109 | |
| 199 | K | A | -2.0166 | |
| 200 | S | A | -0.3876 | |
| 201 | P | A | -0.5717 | |
| 202 | E | A | -1.7313 | |
| 203 | W | A | -0.1180 | |
| 204 | L | A | 0.3126 | |
| 205 | L | A | 0.2331 | |
| 206 | V | A | 0.2279 | |
| 207 | L | A | 0.0000 | |
| 208 | A | A | 0.0000 | |
| 209 | E | A | -0.4710 | |
| 210 | T | A | -0.0948 | |
| 211 | V | A | 0.0000 | |
| 212 | L | A | 0.0000 | |
| 213 | E | A | -0.7800 | |
| 214 | A | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | E | A | -0.3616 | |
| 217 | T | A | -0.0591 | |
| 218 | L | A | 0.0000 | |
| 219 | Y | A | 0.0000 | |
| 220 | D | A | -1.3108 | |
| 221 | L | A | 0.2203 | |
| 222 | I | A | 0.0000 | |
| 223 | V | A | 0.0000 | |
| 224 | K | A | -0.6202 | |
| 225 | P | A | -0.1701 | |
| 226 | A | A | -0.0043 | |
| 227 | L | A | 0.0000 | |
| 228 | E | A | -1.2077 | |
| 229 | A | A | -0.0824 | |
| 230 | Y | A | 0.1600 | |
| 231 | K | A | -1.6055 | |
| 232 | A | A | -0.2542 |