Project name: query_structure

Status: done

Started: 2026-03-16 23:46:36
Settings
Chain sequence(s) A: GGVCPKILQRCRRDSDCPGACICRGNGYCGYPYDVPDYA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:21)
Show buried residues

Minimal score value
-3.5703
Maximal score value
1.6453
Average score
-0.7715
Total score value
-30.0875

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2702
2 G A 0.2736
3 V A 0.4858
4 C A 0.0000
5 P A 0.0464
6 K A -0.1916
7 I A 1.6453
8 L A 1.5747
9 Q A -0.6679
10 R A -2.4885
11 C A -2.8468
12 R A -3.5222
13 R A -3.5703
14 D A -2.2876
15 S A -1.6759
16 D A -2.3728
17 C A 0.0000
18 P A -0.8721
19 G A -0.7771
20 A A -0.1249
21 C A 0.0000
22 I A 0.1015
23 C A -1.6387
24 R A -1.8311
25 G A -1.4464
26 N A -1.9031
27 G A -2.1440
28 Y A -1.5227
29 C A 0.0000
30 G A 0.0000
31 Y A 0.7704
32 P A 0.0000
33 Y A 0.7887
34 D A -0.6996
35 V A -0.0862
36 P A -0.8494
37 D A -1.5738
38 Y A -0.3655
39 A A -0.0455
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Laboratory of Theory of Biopolymers 2018