Project name: bc632f9d12a43b

Status: done

Started: 2025-02-07 23:21:04
Settings
Chain sequence(s) A: MSKVGGGGSGGSTVANIAPVFTGDCKTIPTPEECATFLYKVVNSGGWEKCWVEEVIPWDLGVPTPLVLHLVKNNALPNGKGLVPGCGGGYDVVAMANPERFMVGLDISENALKKARETFSTMPNSSCFSFVKEDVFTWRPEQPFDFIFDYVFFCAIDPKMRPAWGKAYELLKPDGELITLMYPITNHEGGPPFSVSESEYEKVLVPLGFKQLSLEDYSDLAVEPRKGKEKLARWKKMNN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:04)
Show buried residues

Minimal score value
-2.9985
Maximal score value
2.0043
Average score
-0.6788
Total score value
-162.2226

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7282
2 S A -0.0722
3 K A -0.8767
4 V A 0.5864
5 G A -0.3450
6 G A -0.8532
7 G A -0.9543
8 G A -1.1754
9 S A -1.0027
10 G A -1.0686
11 G A -0.7074
12 S A -0.1149
13 T A 0.3090
14 V A 1.3390
15 A A 0.3433
16 N A -0.6854
17 I A 0.1492
18 A A 0.2028
19 P A 0.8486
20 V A 2.0043
21 F A 1.0606
22 T A 0.0914
23 G A -1.0269
24 D A -1.9855
25 C A -0.9942
26 K A -1.1462
27 T A -0.8005
28 I A 0.0000
29 P A -0.9271
30 T A -1.2981
31 P A 0.0000
32 E A -2.0350
33 E A -1.9219
34 C A 0.0000
35 A A 0.0000
36 T A -0.9069
37 F A -0.0438
38 L A 0.0000
39 Y A -0.2289
40 K A -1.5185
41 V A -1.0210
42 V A -0.7381
43 N A -1.6758
44 S A -1.2572
45 G A -1.0468
46 G A -0.7196
47 W A -0.0196
48 E A -0.9344
49 K A -1.0989
50 C A 0.0000
51 W A 0.0000
52 V A -0.2049
53 E A -1.8994
54 E A -2.1083
55 V A -0.6035
56 I A 0.0000
57 P A -0.3181
58 W A 0.1685
59 D A 0.0000
60 L A 0.0000
61 G A -0.5006
62 V A -0.2930
63 P A 0.0000
64 T A 0.0000
65 P A 0.0839
66 L A 0.0000
67 V A 0.0000
68 L A -0.3296
69 H A -0.9980
70 L A 0.0000
71 V A -1.3331
72 K A -2.5197
73 N A -2.6118
74 N A -2.4466
75 A A -1.4413
76 L A 0.0000
77 P A -1.2111
78 N A -2.1380
79 G A -1.3711
80 K A -0.8816
81 G A 0.0000
82 L A 0.0000
83 V A 0.0000
84 P A 0.0000
85 G A -0.0475
86 C A 0.2697
87 G A 0.0000
88 G A 0.0000
89 G A 0.0000
90 Y A 0.1974
91 D A -0.0025
92 V A 0.0000
93 V A 0.0000
94 A A 0.0000
95 M A 0.0000
96 A A 0.0000
97 N A -1.0213
98 P A -1.1108
99 E A -2.2954
100 R A 0.0000
101 F A -0.1086
102 M A 0.0000
103 V A 0.0000
104 G A 0.0000
105 L A 0.0000
106 D A -0.4949
107 I A 0.2230
108 S A 0.0000
109 E A -2.1166
110 N A -1.4903
111 A A 0.0000
112 L A 0.0000
113 K A -2.9235
114 K A -2.4130
115 A A 0.0000
116 R A -2.7113
117 E A -2.9613
118 T A -1.6415
119 F A 0.0000
120 S A -1.1965
121 T A -0.6346
122 M A 0.2793
123 P A -0.1080
124 N A 0.0000
125 S A -0.2817
126 S A -0.2174
127 C A -0.1640
128 F A 0.0000
129 S A -0.0582
130 F A 0.0000
131 V A -0.5481
132 K A -1.6547
133 E A -1.4816
134 D A -0.9571
135 V A 0.0000
136 F A -0.4294
137 T A -0.6267
138 W A -1.2935
139 R A -2.4507
140 P A -1.8895
141 E A -2.5645
142 Q A -2.0828
143 P A -1.7706
144 F A 0.0000
145 D A -1.3550
146 F A 0.0000
147 I A 0.0000
148 F A 0.0000
149 D A 0.0000
150 Y A 0.2892
151 V A 0.4963
152 F A 0.3601
153 F A 0.0000
154 C A 0.0000
155 A A 0.1906
156 I A 0.0000
157 D A -1.2036
158 P A -1.1848
159 K A -1.8567
160 M A -0.7269
161 R A 0.0000
162 P A -0.8934
163 A A -0.3882
164 W A 0.0000
165 G A 0.0000
166 K A -1.1865
167 A A 0.0000
168 Y A -1.2779
169 E A -2.2912
170 L A 0.0000
171 L A 0.0000
172 K A -1.9917
173 P A -2.0703
174 D A -2.5563
175 G A 0.0000
176 E A 0.0000
177 L A 0.0000
178 I A 0.0000
179 T A 0.0000
180 L A 0.0000
181 M A 0.0000
182 Y A 0.0000
183 P A 0.0000
184 I A -0.2231
185 T A -0.9377
186 N A -1.8194
187 H A -2.0591
188 E A -2.4883
189 G A -1.4642
190 G A -0.8497
191 P A 0.0000
192 P A 0.0000
193 F A -0.5457
194 S A -0.8392
195 V A 0.0000
196 S A -0.7254
197 E A -1.0541
198 S A -1.3960
199 E A -1.6175
200 Y A 0.0000
201 E A -1.9187
202 K A -2.0343
203 V A -0.9270
204 L A 0.0000
205 V A 0.0789
206 P A -0.1874
207 L A -0.3326
208 G A -0.5280
209 F A 0.0000
210 K A -1.4233
211 Q A -0.4007
212 L A 0.7115
213 S A 0.4902
214 L A 0.1823
215 E A -1.2142
216 D A -2.4547
217 Y A -1.6229
218 S A -2.2818
219 D A -2.3773
220 L A -1.0570
221 A A -1.6198
222 V A -1.4131
223 E A -2.5663
224 P A -1.6803
225 R A 0.0000
226 K A -2.9985
227 G A -2.1172
228 K A -1.3262
229 E A 0.0000
230 K A -1.3145
231 L A 0.0000
232 A A 0.0000
233 R A -0.1724
234 W A 0.0000
235 K A -1.4873
236 K A -1.9308
237 M A -1.3735
238 N A -2.1601
239 N A -1.8260
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Laboratory of Theory of Biopolymers 2018