Project name: bc7d1693f61380b

Status: done

Started: 2025-06-03 05:01:27
Settings
Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAVSGIDLSHDDISWVRQAPGKGLEWVSIISYAGSTYYASWAKGRLTISKDTSKNQVVLTMTNMDPVDTATYYCARGVPAYSHGGDLWGQGTLTVTVSS
L: DIVMTQSPATLSLSPGERATLSCTTSQSVYHENWLSWFQQKPGQPPKLLIYWASTLAYGVPSRFSGSGSGTDFTLTISSLQPEDAATYYCAGGYGGGRYAFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:43)
Show buried residues

Minimal score value
-2.7327
Maximal score value
1.2632
Average score
-0.4817
Total score value
-110.8015

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.0069
2 V H -0.1320
3 Q H -0.0821
4 L H 0.0000
5 V H 1.0088
6 E H 0.2885
7 S H -0.3480
8 G H -0.8558
9 G H -0.0993
11 G H 0.7467
12 L H 1.2290
13 V H -0.0933
14 Q H -1.5199
15 P H -1.5927
16 G H -1.8531
17 G H -1.4494
18 S H -1.3716
19 L H -0.8712
20 R H -1.9031
21 L H 0.0000
22 S H -0.5107
23 C H 0.0000
24 A H -0.1706
25 V H 0.0000
26 S H -0.5002
27 G H -0.6589
28 I H -0.5332
29 D H -1.1003
30 L H 0.0000
35 S H -0.8100
36 H H -0.9669
37 D H 0.0000
38 D H 0.0000
39 I H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7845
45 A H -0.5370
46 P H -0.8929
47 G H -1.4829
48 K H -2.3721
49 G H -1.6199
50 L H 0.0000
51 E H -1.0283
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 I H 0.0000
56 I H 0.0000
57 S H 0.1508
58 Y H 0.2433
59 A H 0.1021
63 G H -0.1405
64 S H 0.0595
65 T H 0.2283
66 Y H 0.0888
67 Y H -0.3056
68 A H -0.6735
69 S H -0.8623
70 W H -0.2045
71 A H 0.0000
72 K H -1.8487
74 G H -1.4545
75 R H -1.4287
76 L H 0.0000
77 T H -0.6334
78 I H 0.0000
79 S H -0.4273
80 K H -0.9334
81 D H -1.5167
82 T H -1.4956
83 S H -1.4358
84 K H -2.2940
85 N H -1.8201
86 Q H -1.1545
87 V H 0.0000
88 V H -0.6286
89 L H 0.0000
90 T H -0.8285
91 M H 0.0000
92 T H -1.4399
93 N H -2.1155
94 M H 0.0000
95 D H -1.3587
96 P H -0.2389
97 V H 1.2632
98 D H 0.0000
99 T H 0.6078
100 A H 0.0000
101 T H 0.4069
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.2183
107 G H 0.1070
108 V H 0.2333
109 P H 0.3611
110 A H 0.6999
111 Y H 1.2394
112 S H 0.0000
113 H H 0.0000
114 G H 0.0000
115 G H -0.3868
116 D H -0.4025
117 L H -0.0844
118 W H -0.2311
119 G H 0.0000
120 Q H -0.9796
121 G H 0.0000
122 T H 0.0000
123 L H 1.1469
123A T H 0.9695
124 V H 0.0000
125 T H 0.4856
126 V H 0.0000
127 S H -0.5843
128 S H -0.6155
1 D L -1.6468
2 I L -0.2955
3 V L 1.1198
4 M L 0.0000
5 T L -0.1131
6 Q L 0.0000
7 S L -0.5142
8 P L -0.3290
9 A L -0.4714
10 T L -0.6610
11 L L -0.5192
12 S L -0.8209
13 L L -1.2438
14 S L -1.4836
15 P L -1.7055
16 G L -1.7938
17 E L -2.5075
18 R L -2.7327
19 A L 0.0000
20 T L -0.6821
21 L L 0.0000
22 S L -0.5759
23 C L 0.0000
24 T L -0.7454
25 T L 0.0000
26 S L -0.5536
27 Q L -1.3181
28 S L -1.4569
29 V L 0.0000
30 Y L -0.5900
35 H L -1.4743
36 E L -2.3740
37 N L -1.4652
38 W L 0.0000
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L -0.7595
44 Q L 0.0000
45 K L -1.4592
46 P L -1.0543
47 G L -1.3290
48 Q L -1.8668
49 P L -1.3602
50 P L 0.0000
51 K L -1.2821
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0000
56 W L -0.0511
57 A L 0.0000
65 S L -0.2054
66 T L 0.2931
67 L L 0.7180
68 A L 0.0000
69 Y L 1.1861
70 G L 0.2700
71 V L 0.1827
72 P L -0.1647
74 S L -0.4152
75 R L -0.8565
76 F L 0.0000
77 S L -0.2508
78 G L 0.0000
79 S L -0.7164
80 G L -1.2690
83 S L -1.5909
84 G L -1.7137
85 T L -1.7115
86 D L -2.1826
87 F L 0.0000
88 T L -0.6286
89 L L 0.0000
90 T L -0.6094
91 I L 0.0000
92 S L -1.4248
93 S L -1.7425
94 L L 0.0000
95 Q L -1.9260
96 P L -1.5305
97 E L -2.1261
98 D L 0.0000
99 A L -1.2072
100 A L 0.0000
101 T L -0.9030
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 A L 0.0000
106 G L 0.0000
107 G L 0.0000
108 Y L 0.0000
109 G L -0.6261
113 G L -0.7760
114 G L 0.0000
115 R L -1.4716
116 Y L -0.5565
117 A L -0.1533
118 F L 0.0697
119 G L 0.0000
120 Q L -1.4553
121 G L 0.0000
122 T L 0.0000
123 K L -1.4697
124 V L 0.0000
125 E L -1.4254
126 I L -0.6220
127 K L -1.4524
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Laboratory of Theory of Biopolymers 2018