Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAVSGIDLSHDDISWVRQAPGKGLEWVSIISYAGSTYYASWAKGRLTISKDTSKNQVVLTMTNMDPVDTATYYCARGVPAYSHGGDLWGQGTLTVTVSS
L: DIVMTQSPATLSLSPGERATLSCTTSQSVYHENWLSWFQQKPGQPPKLLIYWASTLAYGVPSRFSGSGSGTDFTLTISSLQPEDAATYYCAGGYGGGRYAFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:41) [INFO] Main: Simulation completed successfully. (00:01:43) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.0069 | |
2 | V | H | -0.1320 | |
3 | Q | H | -0.0821 | |
4 | L | H | 0.0000 | |
5 | V | H | 1.0088 | |
6 | E | H | 0.2885 | |
7 | S | H | -0.3480 | |
8 | G | H | -0.8558 | |
9 | G | H | -0.0993 | |
11 | G | H | 0.7467 | |
12 | L | H | 1.2290 | |
13 | V | H | -0.0933 | |
14 | Q | H | -1.5199 | |
15 | P | H | -1.5927 | |
16 | G | H | -1.8531 | |
17 | G | H | -1.4494 | |
18 | S | H | -1.3716 | |
19 | L | H | -0.8712 | |
20 | R | H | -1.9031 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.5107 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.1706 | |
25 | V | H | 0.0000 | |
26 | S | H | -0.5002 | |
27 | G | H | -0.6589 | |
28 | I | H | -0.5332 | |
29 | D | H | -1.1003 | |
30 | L | H | 0.0000 | |
35 | S | H | -0.8100 | |
36 | H | H | -0.9669 | |
37 | D | H | 0.0000 | |
38 | D | H | 0.0000 | |
39 | I | H | 0.0000 | |
40 | S | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.7845 | |
45 | A | H | -0.5370 | |
46 | P | H | -0.8929 | |
47 | G | H | -1.4829 | |
48 | K | H | -2.3721 | |
49 | G | H | -1.6199 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.0283 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | S | H | 0.0000 | |
55 | I | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.1508 | |
58 | Y | H | 0.2433 | |
59 | A | H | 0.1021 | |
63 | G | H | -0.1405 | |
64 | S | H | 0.0595 | |
65 | T | H | 0.2283 | |
66 | Y | H | 0.0888 | |
67 | Y | H | -0.3056 | |
68 | A | H | -0.6735 | |
69 | S | H | -0.8623 | |
70 | W | H | -0.2045 | |
71 | A | H | 0.0000 | |
72 | K | H | -1.8487 | |
74 | G | H | -1.4545 | |
75 | R | H | -1.4287 | |
76 | L | H | 0.0000 | |
77 | T | H | -0.6334 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.4273 | |
80 | K | H | -0.9334 | |
81 | D | H | -1.5167 | |
82 | T | H | -1.4956 | |
83 | S | H | -1.4358 | |
84 | K | H | -2.2940 | |
85 | N | H | -1.8201 | |
86 | Q | H | -1.1545 | |
87 | V | H | 0.0000 | |
88 | V | H | -0.6286 | |
89 | L | H | 0.0000 | |
90 | T | H | -0.8285 | |
91 | M | H | 0.0000 | |
92 | T | H | -1.4399 | |
93 | N | H | -2.1155 | |
94 | M | H | 0.0000 | |
95 | D | H | -1.3587 | |
96 | P | H | -0.2389 | |
97 | V | H | 1.2632 | |
98 | D | H | 0.0000 | |
99 | T | H | 0.6078 | |
100 | A | H | 0.0000 | |
101 | T | H | 0.4069 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.2183 | |
107 | G | H | 0.1070 | |
108 | V | H | 0.2333 | |
109 | P | H | 0.3611 | |
110 | A | H | 0.6999 | |
111 | Y | H | 1.2394 | |
112 | S | H | 0.0000 | |
113 | H | H | 0.0000 | |
114 | G | H | 0.0000 | |
115 | G | H | -0.3868 | |
116 | D | H | -0.4025 | |
117 | L | H | -0.0844 | |
118 | W | H | -0.2311 | |
119 | G | H | 0.0000 | |
120 | Q | H | -0.9796 | |
121 | G | H | 0.0000 | |
122 | T | H | 0.0000 | |
123 | L | H | 1.1469 | |
123A | T | H | 0.9695 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.4856 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5843 | |
128 | S | H | -0.6155 | |
1 | D | L | -1.6468 | |
2 | I | L | -0.2955 | |
3 | V | L | 1.1198 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.1131 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.5142 | |
8 | P | L | -0.3290 | |
9 | A | L | -0.4714 | |
10 | T | L | -0.6610 | |
11 | L | L | -0.5192 | |
12 | S | L | -0.8209 | |
13 | L | L | -1.2438 | |
14 | S | L | -1.4836 | |
15 | P | L | -1.7055 | |
16 | G | L | -1.7938 | |
17 | E | L | -2.5075 | |
18 | R | L | -2.7327 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6821 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.5759 | |
23 | C | L | 0.0000 | |
24 | T | L | -0.7454 | |
25 | T | L | 0.0000 | |
26 | S | L | -0.5536 | |
27 | Q | L | -1.3181 | |
28 | S | L | -1.4569 | |
29 | V | L | 0.0000 | |
30 | Y | L | -0.5900 | |
35 | H | L | -1.4743 | |
36 | E | L | -2.3740 | |
37 | N | L | -1.4652 | |
38 | W | L | 0.0000 | |
39 | L | L | 0.0000 | |
40 | S | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | F | L | 0.0000 | |
43 | Q | L | -0.7595 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.4592 | |
46 | P | L | -1.0543 | |
47 | G | L | -1.3290 | |
48 | Q | L | -1.8668 | |
49 | P | L | -1.3602 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.2821 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.0000 | |
56 | W | L | -0.0511 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.2054 | |
66 | T | L | 0.2931 | |
67 | L | L | 0.7180 | |
68 | A | L | 0.0000 | |
69 | Y | L | 1.1861 | |
70 | G | L | 0.2700 | |
71 | V | L | 0.1827 | |
72 | P | L | -0.1647 | |
74 | S | L | -0.4152 | |
75 | R | L | -0.8565 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.2508 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.7164 | |
80 | G | L | -1.2690 | |
83 | S | L | -1.5909 | |
84 | G | L | -1.7137 | |
85 | T | L | -1.7115 | |
86 | D | L | -2.1826 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.6286 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6094 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.4248 | |
93 | S | L | -1.7425 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.9260 | |
96 | P | L | -1.5305 | |
97 | E | L | -2.1261 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.2072 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.9030 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | A | L | 0.0000 | |
106 | G | L | 0.0000 | |
107 | G | L | 0.0000 | |
108 | Y | L | 0.0000 | |
109 | G | L | -0.6261 | |
113 | G | L | -0.7760 | |
114 | G | L | 0.0000 | |
115 | R | L | -1.4716 | |
116 | Y | L | -0.5565 | |
117 | A | L | -0.1533 | |
118 | F | L | 0.0697 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.4553 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.4697 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.4254 | |
126 | I | L | -0.6220 | |
127 | K | L | -1.4524 |