| Chain sequence(s) |
A: QQKFQFQFEQQ
B: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -3.3269 | |
| 2 | Q | A | -3.3225 | |
| 3 | K | A | -3.3992 | |
| 4 | F | A | -0.9375 | |
| 5 | Q | A | -0.9796 | |
| 6 | F | A | 0.8316 | |
| 7 | Q | A | -0.8906 | |
| 8 | F | A | -0.4769 | |
| 9 | E | A | -3.4687 | |
| 10 | Q | A | -3.3787 | |
| 11 | Q | A | -3.3108 | |
| 1 | Q | B | -3.4660 | |
| 2 | Q | B | -3.4677 | |
| 3 | K | B | -3.4959 | |
| 4 | F | B | -1.0307 | |
| 5 | Q | B | -0.9353 | |
| 6 | F | B | 1.1347 | |
| 7 | Q | B | -0.7008 | |
| 8 | F | B | -0.1690 | |
| 9 | E | B | -3.1855 | |
| 10 | Q | B | -2.8908 | |
| 11 | Q | B | -3.0949 |