| Chain sequence(s) |
A: ASQLTQSPSSLSASVGDRVTITCRASQDISSALVWYQQKPGKAPKLLIYDASSLESGVSSRFSGSESGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVQLQESGGTVCQPGRSLRLSCDASGFTFSTYGMHWVRQAPGKGLEWVAVIWDDGSYKYSGDSVKGRFTISRDNSTNTLYLQMNSLRASDTAVYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4609 | |
| 2 | S | A | -1.4360 | |
| 3 | Q | A | -1.7398 | |
| 4 | L | A | -1.3877 | |
| 5 | T | A | -1.2363 | |
| 6 | Q | A | -1.0430 | |
| 7 | S | A | -0.7214 | |
| 8 | P | A | -0.5667 | |
| 9 | S | A | -0.7372 | |
| 10 | S | A | -0.9108 | |
| 11 | L | A | -0.7620 | |
| 12 | S | A | -1.2460 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -0.9452 | |
| 15 | V | A | 0.1993 | |
| 16 | G | A | -0.6658 | |
| 17 | D | A | -1.5760 | |
| 18 | R | A | -2.2486 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6276 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8982 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.9076 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -2.0222 | |
| 27 | Q | A | -2.6676 | |
| 28 | D | A | -2.8213 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -1.4857 | |
| 31 | S | A | -1.0264 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -1.7774 | |
| 40 | P | A | -1.1984 | |
| 41 | G | A | -1.7387 | |
| 42 | K | A | -2.7137 | |
| 43 | A | A | -1.7243 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.7280 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | -0.0418 | |
| 50 | D | A | -0.3657 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.6062 | |
| 53 | S | A | -0.1487 | |
| 54 | L | A | 0.0874 | |
| 55 | E | A | -0.5180 | |
| 56 | S | A | -0.4895 | |
| 57 | G | A | -0.5601 | |
| 58 | V | A | -0.4107 | |
| 59 | S | A | -0.3474 | |
| 60 | S | A | -0.4228 | |
| 61 | R | A | -0.7173 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.2752 | |
| 64 | G | A | 0.0000 | |
| 65 | S | A | -1.1640 | |
| 66 | E | A | -2.1343 | |
| 67 | S | A | -1.5283 | |
| 68 | G | A | -1.8255 | |
| 69 | T | A | -2.2206 | |
| 70 | D | A | -2.1259 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.9408 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.5805 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -1.3273 | |
| 77 | S | A | -1.0695 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.6215 | |
| 80 | P | A | -1.3139 | |
| 81 | E | A | -1.6347 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | -0.5093 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.7335 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | N | A | -0.3804 | |
| 93 | S | A | -0.3110 | |
| 94 | Y | A | 0.1389 | |
| 95 | P | A | -0.2478 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -0.3890 | |
| 98 | F | A | -0.3111 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -1.1346 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.3144 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.7291 | |
| 106 | I | A | -1.3300 | |
| 107 | K | A | -2.0424 | |
| 108 | G | A | -1.5712 | |
| 109 | G | A | -1.3790 | |
| 110 | G | A | -1.3411 | |
| 111 | G | A | -1.3997 | |
| 112 | S | A | -1.2120 | |
| 113 | G | A | -1.5361 | |
| 114 | G | A | -1.3496 | |
| 115 | G | A | -1.1895 | |
| 116 | G | A | -1.1774 | |
| 117 | S | A | -1.0258 | |
| 118 | G | A | -1.1647 | |
| 119 | G | A | -1.3277 | |
| 120 | G | A | -1.3237 | |
| 121 | G | A | -1.4214 | |
| 122 | S | A | -1.4357 | |
| 123 | Q | A | -1.9504 | |
| 124 | V | A | -1.2624 | |
| 125 | Q | A | -2.1912 | |
| 126 | L | A | 0.0000 | |
| 127 | Q | A | -2.2865 | |
| 128 | E | A | 0.0000 | |
| 129 | S | A | -0.8854 | |
| 130 | G | A | -0.4545 | |
| 131 | G | A | 0.3071 | |
| 132 | T | A | 0.8455 | |
| 133 | V | A | 1.7567 | |
| 134 | C | A | -0.1783 | |
| 135 | Q | A | -1.3386 | |
| 136 | P | A | -1.8233 | |
| 137 | G | A | -2.1688 | |
| 138 | R | A | -2.7238 | |
| 139 | S | A | -2.1798 | |
| 140 | L | A | -1.4423 | |
| 141 | R | A | -2.2343 | |
| 142 | L | A | 0.0000 | |
| 143 | S | A | -1.1792 | |
| 144 | C | A | 0.0000 | |
| 145 | D | A | -2.2493 | |
| 146 | A | A | 0.0000 | |
| 147 | S | A | -1.5213 | |
| 148 | G | A | -1.1366 | |
| 149 | F | A | -0.3754 | |
| 150 | T | A | -0.2089 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -1.1290 | |
| 153 | T | A | -0.5610 | |
| 154 | Y | A | -0.0747 | |
| 155 | G | A | 0.0000 | |
| 156 | M | A | 0.0000 | |
| 157 | H | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | R | A | 0.0000 | |
| 161 | Q | A | -0.6498 | |
| 162 | A | A | -0.7851 | |
| 163 | P | A | -0.8510 | |
| 164 | G | A | -1.4548 | |
| 165 | K | A | -2.2909 | |
| 166 | G | A | -1.4433 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -1.0621 | |
| 169 | W | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | V | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | W | A | -0.4381 | |
| 175 | D | A | -1.5339 | |
| 176 | D | A | -2.1821 | |
| 177 | G | A | -1.4564 | |
| 178 | S | A | -0.8541 | |
| 179 | Y | A | -0.3475 | |
| 180 | K | A | -0.6005 | |
| 181 | Y | A | -0.2896 | |
| 182 | S | A | -1.1367 | |
| 183 | G | A | 0.0000 | |
| 184 | D | A | -2.5311 | |
| 185 | S | A | -1.7083 | |
| 186 | V | A | 0.0000 | |
| 187 | K | A | -2.6651 | |
| 188 | G | A | -1.8185 | |
| 189 | R | A | -1.8152 | |
| 190 | F | A | 0.0000 | |
| 191 | T | A | -1.0942 | |
| 192 | I | A | 0.0000 | |
| 193 | S | A | -0.4956 | |
| 194 | R | A | -1.1242 | |
| 195 | D | A | -1.5605 | |
| 196 | N | A | -1.9207 | |
| 197 | S | A | -1.0433 | |
| 198 | T | A | -1.1771 | |
| 199 | N | A | -1.6208 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | Y | A | -0.8020 | |
| 203 | L | A | 0.0000 | |
| 204 | Q | A | -1.6229 | |
| 205 | M | A | 0.0000 | |
| 206 | N | A | -1.9332 | |
| 207 | S | A | -1.8511 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -2.4805 | |
| 210 | A | A | -1.1433 | |
| 211 | S | A | -0.8310 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | 0.1037 | |
| 214 | A | A | 0.0000 | |
| 215 | V | A | 0.7676 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | 0.0000 | |
| 221 | D | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | I | A | 1.2812 | |
| 224 | T | A | 1.1048 | |
| 225 | M | A | 1.3796 | |
| 226 | V | A | 0.0000 | |
| 227 | R | A | -1.2135 | |
| 228 | G | A | -0.0768 | |
| 229 | V | A | 1.4934 | |
| 230 | M | A | 1.8396 | |
| 231 | K | A | 0.7657 | |
| 232 | D | A | 0.3473 | |
| 233 | Y | A | 0.1196 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | -0.1703 | |
| 236 | Y | A | -0.1084 | |
| 237 | W | A | -0.7678 | |
| 238 | G | A | 0.0000 | |
| 239 | Q | A | -1.9871 | |
| 240 | G | A | 0.0000 | |
| 241 | T | A | 0.2560 | |
| 242 | L | A | 1.7199 | |
| 243 | V | A | 0.0000 | |
| 244 | T | A | 0.7033 | |
| 245 | V | A | 0.0000 | |
| 246 | S | A | -0.3644 | |
| 247 | S | A | -0.2881 |