Project name: PTL

Status: done

Started: 2026-06-11 01:33:05
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Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-3.2467
Maximal score value
2.4777
Average score
-0.4928
Total score value
-63.0834

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.5871
2 V A -0.2850
3 F A 0.2852
4 G A 0.0000
5 R A -0.6740
6 C A 0.2199
7 E A -0.0688
8 L A 0.0628
9 A A -0.3031
10 A A -0.8548
11 A A -0.9768
12 M A -0.4849
13 K A -2.3772
14 R A -2.8896
15 H A -2.1473
16 G A -1.2130
17 L A 0.2298
18 D A -1.6174
19 N A -1.7850
20 Y A -0.9189
21 R A -1.6039
22 G A -0.6185
23 Y A 1.1284
24 S A 0.4785
25 L A 1.3343
26 G A 0.3149
27 N A -0.1360
28 W A 1.6456
29 V A 2.3865
30 C A 1.5515
31 A A 0.5589
32 A A 0.0460
33 K A -1.1373
34 F A -0.0241
35 E A -1.6631
36 S A 0.0000
37 N A -0.8778
38 F A 0.4809
39 N A -0.9101
40 T A -1.0598
41 Q A -1.3833
42 A A -0.3762
43 T A -0.9280
44 N A -2.7021
45 R A -3.0870
46 N A -2.3940
47 T A -1.6291
48 D A -2.4915
49 G A -2.0201
50 S A 0.0000
51 T A -1.8572
52 D A -1.1180
53 Y A 0.0930
54 G A 0.8366
55 I A 2.4777
56 L A 1.8854
57 Q A -0.1776
58 I A 0.3558
59 N A -0.7528
60 S A -0.6288
61 R A -1.7765
62 W A 0.1237
63 W A 0.3998
64 C A 0.0000
65 N A -1.4616
66 D A -2.6270
67 G A -2.3123
68 R A -2.7287
69 T A -2.1917
70 P A -1.3950
71 G A -1.3071
72 S A -1.3939
73 R A -1.0360
74 N A -1.6893
75 L A 0.5016
76 C A 0.1026
77 N A -0.9432
78 I A 0.2702
79 P A -0.3578
80 C A 0.3003
81 S A 0.4084
82 A A 0.8286
83 L A 1.2798
84 L A 1.4540
85 S A 0.0407
86 S A -0.7434
87 D A -0.8286
88 I A 0.7117
89 T A 0.3790
90 A A 0.0969
91 S A 0.2756
92 V A 0.8045
93 N A -0.6721
94 C A 0.3454
95 A A 0.1759
96 K A -1.6258
97 K A -0.9737
98 I A 1.4582
99 V A 0.7991
100 S A -1.1503
101 D A -1.8889
102 G A -1.5425
103 N A -1.5472
104 G A -1.0185
105 M A -0.0509
106 N A -0.3586
107 A A 0.6667
108 W A 1.8817
109 V A 2.1224
110 A A 0.7861
111 W A -0.5802
112 R A -2.4625
113 N A -3.0827
114 R A -3.2467
115 C A -1.8985
116 K A -2.3971
117 G A -1.4081
118 T A -0.5350
119 D A -0.1787
120 V A 1.7103
121 Q A 0.5369
122 A A 1.2187
123 W A 1.5978
124 I A 0.9480
125 R A -1.1076
126 G A -1.0741
127 C A -0.6312
128 R A -1.6975
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Laboratory of Theory of Biopolymers 2018