| Chain sequence(s) |
A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.5871 | |
| 2 | V | A | -0.2850 | |
| 3 | F | A | 0.2852 | |
| 4 | G | A | 0.0000 | |
| 5 | R | A | -0.6740 | |
| 6 | C | A | 0.2199 | |
| 7 | E | A | -0.0688 | |
| 8 | L | A | 0.0628 | |
| 9 | A | A | -0.3031 | |
| 10 | A | A | -0.8548 | |
| 11 | A | A | -0.9768 | |
| 12 | M | A | -0.4849 | |
| 13 | K | A | -2.3772 | |
| 14 | R | A | -2.8896 | |
| 15 | H | A | -2.1473 | |
| 16 | G | A | -1.2130 | |
| 17 | L | A | 0.2298 | |
| 18 | D | A | -1.6174 | |
| 19 | N | A | -1.7850 | |
| 20 | Y | A | -0.9189 | |
| 21 | R | A | -1.6039 | |
| 22 | G | A | -0.6185 | |
| 23 | Y | A | 1.1284 | |
| 24 | S | A | 0.4785 | |
| 25 | L | A | 1.3343 | |
| 26 | G | A | 0.3149 | |
| 27 | N | A | -0.1360 | |
| 28 | W | A | 1.6456 | |
| 29 | V | A | 2.3865 | |
| 30 | C | A | 1.5515 | |
| 31 | A | A | 0.5589 | |
| 32 | A | A | 0.0460 | |
| 33 | K | A | -1.1373 | |
| 34 | F | A | -0.0241 | |
| 35 | E | A | -1.6631 | |
| 36 | S | A | 0.0000 | |
| 37 | N | A | -0.8778 | |
| 38 | F | A | 0.4809 | |
| 39 | N | A | -0.9101 | |
| 40 | T | A | -1.0598 | |
| 41 | Q | A | -1.3833 | |
| 42 | A | A | -0.3762 | |
| 43 | T | A | -0.9280 | |
| 44 | N | A | -2.7021 | |
| 45 | R | A | -3.0870 | |
| 46 | N | A | -2.3940 | |
| 47 | T | A | -1.6291 | |
| 48 | D | A | -2.4915 | |
| 49 | G | A | -2.0201 | |
| 50 | S | A | 0.0000 | |
| 51 | T | A | -1.8572 | |
| 52 | D | A | -1.1180 | |
| 53 | Y | A | 0.0930 | |
| 54 | G | A | 0.8366 | |
| 55 | I | A | 2.4777 | |
| 56 | L | A | 1.8854 | |
| 57 | Q | A | -0.1776 | |
| 58 | I | A | 0.3558 | |
| 59 | N | A | -0.7528 | |
| 60 | S | A | -0.6288 | |
| 61 | R | A | -1.7765 | |
| 62 | W | A | 0.1237 | |
| 63 | W | A | 0.3998 | |
| 64 | C | A | 0.0000 | |
| 65 | N | A | -1.4616 | |
| 66 | D | A | -2.6270 | |
| 67 | G | A | -2.3123 | |
| 68 | R | A | -2.7287 | |
| 69 | T | A | -2.1917 | |
| 70 | P | A | -1.3950 | |
| 71 | G | A | -1.3071 | |
| 72 | S | A | -1.3939 | |
| 73 | R | A | -1.0360 | |
| 74 | N | A | -1.6893 | |
| 75 | L | A | 0.5016 | |
| 76 | C | A | 0.1026 | |
| 77 | N | A | -0.9432 | |
| 78 | I | A | 0.2702 | |
| 79 | P | A | -0.3578 | |
| 80 | C | A | 0.3003 | |
| 81 | S | A | 0.4084 | |
| 82 | A | A | 0.8286 | |
| 83 | L | A | 1.2798 | |
| 84 | L | A | 1.4540 | |
| 85 | S | A | 0.0407 | |
| 86 | S | A | -0.7434 | |
| 87 | D | A | -0.8286 | |
| 88 | I | A | 0.7117 | |
| 89 | T | A | 0.3790 | |
| 90 | A | A | 0.0969 | |
| 91 | S | A | 0.2756 | |
| 92 | V | A | 0.8045 | |
| 93 | N | A | -0.6721 | |
| 94 | C | A | 0.3454 | |
| 95 | A | A | 0.1759 | |
| 96 | K | A | -1.6258 | |
| 97 | K | A | -0.9737 | |
| 98 | I | A | 1.4582 | |
| 99 | V | A | 0.7991 | |
| 100 | S | A | -1.1503 | |
| 101 | D | A | -1.8889 | |
| 102 | G | A | -1.5425 | |
| 103 | N | A | -1.5472 | |
| 104 | G | A | -1.0185 | |
| 105 | M | A | -0.0509 | |
| 106 | N | A | -0.3586 | |
| 107 | A | A | 0.6667 | |
| 108 | W | A | 1.8817 | |
| 109 | V | A | 2.1224 | |
| 110 | A | A | 0.7861 | |
| 111 | W | A | -0.5802 | |
| 112 | R | A | -2.4625 | |
| 113 | N | A | -3.0827 | |
| 114 | R | A | -3.2467 | |
| 115 | C | A | -1.8985 | |
| 116 | K | A | -2.3971 | |
| 117 | G | A | -1.4081 | |
| 118 | T | A | -0.5350 | |
| 119 | D | A | -0.1787 | |
| 120 | V | A | 1.7103 | |
| 121 | Q | A | 0.5369 | |
| 122 | A | A | 1.2187 | |
| 123 | W | A | 1.5978 | |
| 124 | I | A | 0.9480 | |
| 125 | R | A | -1.1076 | |
| 126 | G | A | -1.0741 | |
| 127 | C | A | -0.6312 | |
| 128 | R | A | -1.6975 |