| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFWITYEEKFYRGEAIVLTVPGSKRSYDLTGLKPGTEYKVWIVGVKGGQGSWPLSAIFTTGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0247 | |
| 2 | L | A | 0.5927 | |
| 3 | P | A | 0.2522 | |
| 4 | A | A | 0.0336 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.1137 | |
| 7 | N | A | -1.5398 | |
| 8 | L | A | -0.1629 | |
| 9 | V | A | 1.1546 | |
| 10 | V | A | 0.5902 | |
| 11 | S | A | -0.6029 | |
| 12 | R | A | -1.8337 | |
| 13 | V | A | -1.0722 | |
| 14 | T | A | -1.9027 | |
| 15 | E | A | -3.0174 | |
| 16 | D | A | -2.9705 | |
| 17 | S | A | -2.1491 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2190 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4028 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3245 | |
| 24 | A | A | -1.4224 | |
| 25 | P | A | -1.3339 | |
| 26 | D | A | -2.2643 | |
| 27 | A | A | -1.4392 | |
| 28 | A | A | -1.1743 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6898 | |
| 31 | S | A | -1.2422 | |
| 32 | F | A | 0.0000 | |
| 33 | W | A | 1.1880 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.2391 | |
| 37 | E | A | -0.8112 | |
| 38 | E | A | -1.1694 | |
| 39 | K | A | -0.8317 | |
| 40 | F | A | 1.0779 | |
| 41 | Y | A | 0.3123 | |
| 42 | R | A | -1.7240 | |
| 43 | G | A | -1.7781 | |
| 44 | E | A | -1.9697 | |
| 45 | A | A | -0.6414 | |
| 46 | I | A | 1.0686 | |
| 47 | V | A | 2.1827 | |
| 48 | L | A | 1.4992 | |
| 49 | T | A | 0.6715 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9750 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5679 | |
| 54 | K | A | -1.6317 | |
| 55 | R | A | -1.1112 | |
| 56 | S | A | -0.6565 | |
| 57 | Y | A | -0.7821 | |
| 58 | D | A | -1.6613 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4761 | |
| 61 | G | A | -1.5426 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0306 | |
| 64 | P | A | -2.6471 | |
| 65 | G | A | -1.9508 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -1.0143 | |
| 68 | Y | A | 0.0000 | |
| 69 | K | A | -0.5007 | |
| 70 | V | A | 0.0000 | |
| 71 | W | A | 0.6904 | |
| 72 | I | A | 0.0000 | |
| 73 | V | A | 0.5265 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.9835 | |
| 76 | K | A | -2.0268 | |
| 77 | G | A | -1.8192 | |
| 78 | G | A | -1.7680 | |
| 79 | Q | A | -1.6962 | |
| 80 | G | A | -0.2936 | |
| 81 | S | A | 0.0000 | |
| 82 | W | A | 1.4198 | |
| 83 | P | A | 0.4358 | |
| 84 | L | A | -0.0514 | |
| 85 | S | A | 0.2738 | |
| 86 | A | A | 0.8275 | |
| 87 | I | A | 0.9079 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.9951 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -1.8170 | |
| 92 | G | A | -1.7461 |