Project name: query_structure

Status: done

Started: 2026-03-17 00:27:10
Settings
Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVPVLGYATAINYHWYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:43)
Show buried residues

Minimal score value
-3.1787
Maximal score value
1.8129
Average score
-0.5795
Total score value
-71.861

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.0879
2 V A 0.0869
3 Q A -1.3469
4 L A 0.0000
5 Q A -1.4833
6 E A 0.0000
7 S A -1.1841
8 G A -1.0431
9 G A -0.8307
10 G A -0.0595
11 L A 1.0601
12 V A 0.2443
13 Q A -0.9509
14 A A -1.1299
15 G A -1.0655
16 G A -0.8346
17 S A -1.1739
18 L A -0.9084
19 R A -2.1363
20 L A 0.0000
21 S A -0.8373
22 C A 0.0000
23 A A -1.1507
24 A A -0.6280
25 S A -0.5934
26 G A -0.1950
27 Y A 0.5588
28 I A 0.0000
29 S A -1.3103
30 D A -1.4461
31 A A -0.1249
32 Y A 0.2387
33 Y A 0.2182
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A 0.0177
38 R A 0.0000
39 Q A -1.7774
40 A A -1.8393
41 P A -1.3094
42 G A -1.7935
43 K A -2.9325
44 E A -3.1787
45 R A -2.2615
46 E A -1.0812
47 F A 0.2343
48 V A 0.0000
49 A A 0.0000
50 T A 0.4851
51 I A 0.0000
52 T A 0.0000
53 H A -1.6831
54 G A -1.1534
55 T A -1.1002
56 N A -1.3000
57 T A -0.1025
58 Y A 0.7641
59 Y A -0.1182
60 A A -0.8864
61 D A -2.2345
62 S A -1.7479
63 V A 0.0000
64 K A -2.4661
65 G A -1.7923
66 R A -1.4939
67 F A 0.0000
68 T A -0.7239
69 I A 0.0000
70 S A -0.6621
71 R A -1.3021
72 D A -2.0165
73 N A -2.3746
74 A A -1.6544
75 K A -2.4296
76 N A -1.6392
77 T A -1.4212
78 V A 0.0000
79 Y A -0.6626
80 L A 0.0000
81 Q A -1.2415
82 M A 0.0000
83 N A -1.3758
84 S A -1.1727
85 L A 0.0000
86 K A -2.1429
87 P A -1.5793
88 E A -2.2637
89 D A 0.0000
90 T A -0.8742
91 A A 0.0000
92 V A -0.5918
93 Y A 0.0000
94 Y A -0.3582
95 C A 0.0000
96 A A 0.0000
97 V A 0.0000
98 P A 0.0000
99 V A 0.8929
100 L A 1.3202
101 G A 0.7980
102 Y A 1.5192
103 A A 0.8132
104 T A 0.4815
105 A A 0.8356
106 I A 1.8129
107 N A 0.1767
108 Y A 0.8242
109 H A -0.0254
110 W A 0.6806
111 Y A 0.8177
112 W A 0.3534
113 G A -0.5861
114 Q A -1.5134
115 G A -0.9617
116 T A 0.0000
117 Q A -1.1822
118 V A 0.0000
119 T A -0.2497
120 V A 0.0000
121 S A -0.5295
122 S A -0.7264
123 L A 0.2123
124 E A -1.2742
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Laboratory of Theory of Biopolymers 2018