| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVPVLGYATAINYHWYWGQGTQVTVSSLE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.0879 | |
| 2 | V | A | 0.0869 | |
| 3 | Q | A | -1.3469 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.4833 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.1841 | |
| 8 | G | A | -1.0431 | |
| 9 | G | A | -0.8307 | |
| 10 | G | A | -0.0595 | |
| 11 | L | A | 1.0601 | |
| 12 | V | A | 0.2443 | |
| 13 | Q | A | -0.9509 | |
| 14 | A | A | -1.1299 | |
| 15 | G | A | -1.0655 | |
| 16 | G | A | -0.8346 | |
| 17 | S | A | -1.1739 | |
| 18 | L | A | -0.9084 | |
| 19 | R | A | -2.1363 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8373 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1507 | |
| 24 | A | A | -0.6280 | |
| 25 | S | A | -0.5934 | |
| 26 | G | A | -0.1950 | |
| 27 | Y | A | 0.5588 | |
| 28 | I | A | 0.0000 | |
| 29 | S | A | -1.3103 | |
| 30 | D | A | -1.4461 | |
| 31 | A | A | -0.1249 | |
| 32 | Y | A | 0.2387 | |
| 33 | Y | A | 0.2182 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.0177 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.7774 | |
| 40 | A | A | -1.8393 | |
| 41 | P | A | -1.3094 | |
| 42 | G | A | -1.7935 | |
| 43 | K | A | -2.9325 | |
| 44 | E | A | -3.1787 | |
| 45 | R | A | -2.2615 | |
| 46 | E | A | -1.0812 | |
| 47 | F | A | 0.2343 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | 0.4851 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | H | A | -1.6831 | |
| 54 | G | A | -1.1534 | |
| 55 | T | A | -1.1002 | |
| 56 | N | A | -1.3000 | |
| 57 | T | A | -0.1025 | |
| 58 | Y | A | 0.7641 | |
| 59 | Y | A | -0.1182 | |
| 60 | A | A | -0.8864 | |
| 61 | D | A | -2.2345 | |
| 62 | S | A | -1.7479 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.4661 | |
| 65 | G | A | -1.7923 | |
| 66 | R | A | -1.4939 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.7239 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6621 | |
| 71 | R | A | -1.3021 | |
| 72 | D | A | -2.0165 | |
| 73 | N | A | -2.3746 | |
| 74 | A | A | -1.6544 | |
| 75 | K | A | -2.4296 | |
| 76 | N | A | -1.6392 | |
| 77 | T | A | -1.4212 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6626 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2415 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.3758 | |
| 84 | S | A | -1.1727 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.1429 | |
| 87 | P | A | -1.5793 | |
| 88 | E | A | -2.2637 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.8742 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.5918 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.3582 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | P | A | 0.0000 | |
| 99 | V | A | 0.8929 | |
| 100 | L | A | 1.3202 | |
| 101 | G | A | 0.7980 | |
| 102 | Y | A | 1.5192 | |
| 103 | A | A | 0.8132 | |
| 104 | T | A | 0.4815 | |
| 105 | A | A | 0.8356 | |
| 106 | I | A | 1.8129 | |
| 107 | N | A | 0.1767 | |
| 108 | Y | A | 0.8242 | |
| 109 | H | A | -0.0254 | |
| 110 | W | A | 0.6806 | |
| 111 | Y | A | 0.8177 | |
| 112 | W | A | 0.3534 | |
| 113 | G | A | -0.5861 | |
| 114 | Q | A | -1.5134 | |
| 115 | G | A | -0.9617 | |
| 116 | T | A | 0.0000 | |
| 117 | Q | A | -1.1822 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.2497 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.5295 | |
| 122 | S | A | -0.7264 | |
| 123 | L | A | 0.2123 | |
| 124 | E | A | -1.2742 |