| Chain sequence(s) |
A: YEEYCTANAVTGPCRASFPRWYFDVERNSCNNFIYGGCRGNKNSYRSEEACMLRCFRQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | -1.0167 | |
| 2 | E | A | -2.3468 | |
| 3 | E | A | -2.8486 | |
| 4 | Y | A | -1.7509 | |
| 5 | C | A | 0.0000 | |
| 6 | T | A | -1.1660 | |
| 7 | A | A | -1.5112 | |
| 8 | N | A | -1.3739 | |
| 9 | A | A | -0.6560 | |
| 10 | V | A | -0.1944 | |
| 11 | T | A | -0.0802 | |
| 12 | G | A | -0.8018 | |
| 13 | P | A | -0.9212 | |
| 14 | C | A | -1.0942 | |
| 15 | R | A | -1.5691 | |
| 16 | A | A | -0.5310 | |
| 17 | S | A | 0.1804 | |
| 18 | F | A | 0.7004 | |
| 19 | P | A | 0.0074 | |
| 20 | R | A | -0.8439 | |
| 21 | W | A | -1.3038 | |
| 22 | Y | A | -0.9072 | |
| 23 | F | A | 0.0000 | |
| 24 | D | A | -1.5077 | |
| 25 | V | A | -0.6333 | |
| 26 | E | A | -2.4274 | |
| 27 | R | A | -3.0527 | |
| 28 | N | A | -2.0690 | |
| 29 | S | A | -1.3582 | |
| 30 | C | A | 0.0000 | |
| 31 | N | A | -1.9417 | |
| 32 | N | A | -1.6968 | |
| 33 | F | A | 0.2189 | |
| 34 | I | A | 1.1163 | |
| 35 | Y | A | 0.4371 | |
| 36 | G | A | 0.0000 | |
| 37 | G | A | -0.5091 | |
| 38 | C | A | -1.1046 | |
| 39 | R | A | -1.9158 | |
| 40 | G | A | -1.5762 | |
| 41 | N | A | -1.9713 | |
| 42 | K | A | -2.4562 | |
| 43 | N | A | 0.0000 | |
| 44 | S | A | -1.3751 | |
| 45 | Y | A | -1.8527 | |
| 46 | R | A | -2.4040 | |
| 47 | S | A | -2.3002 | |
| 48 | E | A | -2.6936 | |
| 49 | E | A | -2.3506 | |
| 50 | A | A | -1.3654 | |
| 51 | C | A | 0.0000 | |
| 52 | M | A | -0.4562 | |
| 53 | L | A | -0.4891 | |
| 54 | R | A | -0.9329 | |
| 55 | C | A | 0.0000 | |
| 56 | F | A | -0.1027 | |
| 57 | R | A | -1.7130 | |
| 58 | Q | A | -1.6280 |