Chain sequence(s) |
A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:11) [INFO] Main: Simulation completed successfully. (00:03:13) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 1.0828 | |
2 | A | A | 1.5430 | |
3 | Y | A | 2.6042 | |
4 | V | A | 3.4840 | |
5 | Y | A | 2.7686 | |
6 | D | A | 1.0691 | |
7 | F | A | 2.2051 | |
8 | A | A | 1.5730 | |
9 | F | A | 1.6643 | |
10 | R | A | -0.8175 | |
11 | D | A | -1.2157 | |
12 | L | A | 0.6729 | |
13 | A | A | -0.1120 | |
14 | A | A | -0.1751 | |
15 | Y | A | 0.5115 | |
16 | R | A | -0.4856 | |
17 | F | A | 1.3872 | |
18 | H | A | -0.0707 | |
19 | N | A | -0.3923 | |
20 | I | A | 1.3087 | |
21 | A | A | 0.4370 | |
22 | G | A | 0.0989 | |
23 | H | A | 0.0413 | |
24 | Y | A | 1.0769 | |
25 | A | A | 0.7703 | |
26 | A | A | 1.1214 | |
27 | Y | A | 2.0399 | |
28 | C | A | 2.1177 | |
29 | Y | A | 2.3978 | |
30 | S | A | 1.6858 | |
31 | L | A | 2.3028 | |
32 | Y | A | 1.9988 | |
33 | G | A | 0.8030 | |
34 | T | A | 0.8371 | |
35 | T | A | 1.1045 | |
36 | L | A | 1.4731 | |
37 | A | A | 0.6517 | |
38 | A | A | 0.9199 | |
39 | Y | A | 1.5762 | |
40 | K | A | 0.0530 | |
41 | T | A | 0.6177 | |
42 | V | A | 2.0993 | |
43 | L | A | 1.7930 | |
44 | E | A | -0.4985 | |
45 | L | A | 0.2378 | |
46 | T | A | -0.2327 | |
47 | E | A | -0.8655 | |
48 | V | A | 0.4605 | |
49 | A | A | -0.2047 | |
50 | A | A | -0.4578 | |
51 | Y | A | 0.0797 | |
52 | A | A | -0.8111 | |
53 | E | A | -2.3710 | |
54 | K | A | -2.3478 | |
55 | L | A | -1.9142 | |
56 | R | A | -3.8815 | |
57 | H | A | -3.9695 | |
58 | L | A | -3.0610 | |
59 | N | A | -3.9376 | |
60 | E | A | -4.4776 | |
61 | K | A | -4.2559 | |
62 | R | A | -4.6439 | |
63 | R | A | -4.0348 | |
64 | F | A | -1.5778 | |
65 | H | A | -2.5627 | |
66 | N | A | -2.7787 | |
67 | G | A | -1.7962 | |
68 | P | A | -1.3202 | |
69 | G | A | -0.9540 | |
70 | P | A | -0.6928 | |
71 | G | A | -1.2137 | |
72 | L | A | -0.5381 | |
73 | D | A | -2.5781 | |
74 | K | A | -3.6201 | |
75 | K | A | -3.5466 | |
76 | Q | A | -3.1610 | |
77 | R | A | -2.4732 | |
78 | F | A | 0.1493 | |
79 | H | A | -1.0476 | |
80 | N | A | -1.1164 | |
81 | I | A | -0.7312 | |
82 | R | A | -2.2542 | |
83 | G | A | -1.9854 | |
84 | R | A | -2.1263 | |
85 | W | A | -0.0623 | |
86 | T | A | -0.0682 | |
87 | G | A | -0.6170 | |
88 | P | A | -0.8298 | |
89 | G | A | -1.0623 | |
90 | P | A | -1.1230 | |
91 | G | A | -1.9444 | |
92 | N | A | -2.3728 | |
93 | P | A | -1.8224 | |
94 | A | A | -1.7829 | |
95 | E | A | -2.8352 | |
96 | K | A | -2.6596 | |
97 | L | A | -1.0317 | |
98 | R | A | -3.0614 | |
99 | H | A | -3.0791 | |
100 | L | A | -1.8479 | |
101 | N | A | -2.9682 | |
102 | E | A | -3.9553 | |
103 | K | A | -3.7928 | |
104 | R | A | -3.7290 | |
105 | R | A | -3.0322 | |
106 | F | A | -0.7701 | |
107 | G | A | -1.3998 | |
108 | P | A | -0.8472 | |
109 | G | A | -0.7190 | |
110 | P | A | -0.9512 | |
111 | G | A | -1.3208 | |
112 | S | A | -1.2280 | |
113 | K | A | -1.9630 | |
114 | I | A | -0.6071 | |
115 | S | A | -1.5386 | |
116 | E | A | -1.9323 | |
117 | Y | A | -0.0972 | |
118 | R | A | -1.2346 | |
119 | H | A | -0.4850 | |
120 | Y | A | 1.3246 | |
121 | C | A | 1.3427 | |
122 | Y | A | 1.7054 | |
123 | S | A | 1.5299 | |
124 | L | A | 2.5602 | |
125 | Y | A | 2.0622 | |
126 | G | A | 0.8229 | |
127 | G | A | 0.0319 | |
128 | P | A | -0.5396 | |
129 | G | A | -0.6727 | |
130 | P | A | -0.6664 | |
131 | G | A | -0.5737 | |
132 | Y | A | 0.1147 | |
133 | R | A | -0.9064 | |
134 | A | A | -0.1704 | |
135 | H | A | 0.1987 | |
136 | Y | A | 1.5978 | |
137 | N | A | 1.1767 | |
138 | I | A | 2.8100 | |
139 | V | A | 3.0061 | |
140 | T | A | 2.6350 | |
141 | F | A | 3.5701 | |
142 | A | A | 2.6751 | |
143 | A | A | 2.1111 | |
144 | Y | A | 2.3222 | |
145 | T | A | 1.8948 | |
146 | L | A | 2.5012 | |
147 | Q | A | 1.2441 | |
148 | D | A | 0.6244 | |
149 | I | A | 2.8347 | |
150 | V | A | 3.1794 | |
151 | L | A | 2.5182 | |
152 | H | A | 1.7379 | |
153 | L | A | 3.0119 | |
154 | A | A | 2.6562 | |
155 | A | A | 2.5809 | |
156 | Y | A | 3.2618 | |
157 | L | A | 3.1493 | |
158 | L | A | 3.2060 | |
159 | M | A | 3.3341 | |
160 | G | A | 2.5016 | |
161 | T | A | 2.8538 | |
162 | L | A | 3.6598 | |
163 | G | A | 2.5883 | |
164 | I | A | 3.9314 | |
165 | V | A | 4.0994 | |
166 | A | A | 2.7238 | |
167 | A | A | 2.5269 | |
168 | Y | A | 3.2645 | |
169 | L | A | 2.5620 | |
170 | P | A | 0.3013 | |
171 | A | A | -0.8733 | |
172 | R | A | -2.7699 | |
173 | R | A | -3.2829 | |
174 | A | A | -2.5012 | |
175 | E | A | -2.9987 | |
176 | P | A | -1.9177 | |
177 | Q | A | -1.6037 | |
178 | A | A | -0.2515 | |
179 | A | A | 0.9536 | |
180 | Y | A | 2.4412 | |
181 | L | A | 3.0169 | |
182 | L | A | 2.5012 | |
183 | C | A | 0.8741 | |
184 | H | A | -1.0496 | |
185 | E | A | -2.0876 | |
186 | Q | A | -1.7644 | |
187 | L | A | -0.2597 | |
188 | S | A | -1.1209 | |
189 | D | A | -2.3992 | |
190 | S | A | -2.5611 | |
191 | E | A | -3.9280 | |
192 | E | A | -4.3702 | |
193 | E | A | -4.3111 | |
194 | N | A | -3.8404 | |
195 | D | A | -3.3150 | |
196 | G | A | -2.0623 | |
197 | P | A | -1.3204 | |
198 | G | A | -1.0661 | |
199 | P | A | -1.0930 | |
200 | G | A | -1.3856 | |
201 | Q | A | -1.7928 | |
202 | S | A | -1.0643 | |
203 | T | A | -0.7606 | |
204 | H | A | -0.6226 | |
205 | V | A | 0.6871 | |
206 | D | A | -0.7741 | |
207 | I | A | 0.7850 | |
208 | R | A | -0.9730 | |
209 | T | A | -0.0794 | |
210 | L | A | 1.4814 | |
211 | E | A | 0.0699 | |
212 | D | A | -0.1477 | |
213 | L | A | 1.7861 | |
214 | L | A | 2.3236 | |
215 | M | A | 1.5441 | |
216 | G | A | 0.3857 | |
217 | P | A | -0.3382 | |
218 | G | A | -0.8968 | |
219 | P | A | -0.8458 | |
220 | G | A | -0.8368 | |
221 | T | A | -0.4827 | |
222 | P | A | -0.4335 | |
223 | T | A | 0.0032 | |
224 | L | A | 1.2613 | |
225 | H | A | -0.3028 | |
226 | E | A | -0.5574 | |
227 | Y | A | 1.2498 | |
228 | M | A | 1.2331 | |
229 | L | A | 0.9671 | |
230 | D | A | -0.5542 | |
231 | L | A | 0.6003 | |
232 | Q | A | -1.0236 | |
233 | P | A | -1.4912 | |
234 | E | A | -2.2550 | |
235 | T | A | -1.5575 | |
236 | G | A | -1.2264 | |
237 | P | A | -1.0539 | |
238 | G | A | -0.7691 | |
239 | P | A | -0.7728 | |
240 | G | A | -0.6356 | |
241 | L | A | 0.5394 | |
242 | Q | A | -0.6080 | |
243 | D | A | -0.3711 | |
244 | I | A | 2.2298 | |
245 | V | A | 2.7737 | |
246 | L | A | 2.2399 | |
247 | H | A | 0.6548 | |
248 | L | A | 0.5207 | |
249 | E | A | -1.7161 | |
250 | P | A | -2.0170 | |
251 | Q | A | -2.4452 | |
252 | N | A | -2.5324 | |
253 | E | A | -1.9273 | |
254 | I | A | 0.3794 | |
255 | P | A | -0.2719 | |
256 | G | A | -0.5618 | |
257 | P | A | -0.6578 | |
258 | G | A | -0.9806 | |
259 | P | A | -0.8159 | |
260 | G | A | -0.7333 |