Project name: mutVH

Status: done

Started: 2026-03-23 07:45:24
Settings
Chain sequence(s) A: QVQLQQSGPELVKPGASVRMSCKTSGYTFTDYVISWFKQRPGQEREGIGEIFPRTGSTYYNENFKATATLTADKSSNTAYMQLSSLTSEDSAAYFCAFITSVDWAMEYWGQGTSVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-3.2497
Maximal score value
1.1889
Average score
-0.7295
Total score value
-86.8112

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4113
2 V A -0.7987
3 Q A -1.3331
4 L A 0.0000
5 Q A -1.7484
6 Q A 0.0000
7 S A -1.2183
8 G A -1.0715
9 P A -0.5718
10 E A -0.4615
11 L A 0.7958
12 V A -0.2887
13 K A -1.6581
14 P A -1.5827
15 G A -1.0998
16 A A -0.8589
17 S A -1.0672
18 V A 0.0000
19 R A -2.1979
20 M A 0.0000
21 S A -0.9625
22 C A 0.0000
23 K A -1.8248
24 T A 0.0000
25 S A -1.1586
26 G A -0.9311
27 Y A -0.6829
28 T A -0.8768
29 F A 0.0000
30 T A -1.8982
31 D A -1.9016
32 Y A -0.6700
33 V A -0.1267
34 I A 0.0000
35 S A 0.0000
36 W A 0.0000
37 F A -0.2594
38 K A 0.0000
39 Q A -1.6311
40 R A -1.8588
41 P A -1.3462
42 G A -1.6210
43 Q A -2.5287
44 E A -3.2497
45 R A -2.8164
46 E A -2.1098
47 G A -1.3075
48 I A 0.0000
49 G A 0.0000
50 E A 0.0657
51 I A 0.0000
52 F A 0.0048
53 P A 0.0000
54 R A -2.4372
55 T A -1.1527
56 G A -1.0628
57 S A -0.2097
58 T A 0.5177
59 Y A 0.7866
60 Y A -0.6679
61 N A -1.8693
62 E A -2.9484
63 N A -2.7912
64 F A 0.0000
65 K A -2.4620
66 A A -1.3470
67 T A -0.8734
68 A A 0.0000
69 T A -0.7218
70 L A 0.0000
71 T A -0.4561
72 A A -1.2096
73 D A -2.0823
74 K A -2.6334
75 S A -1.4506
76 S A -1.4972
77 N A -1.8745
78 T A 0.0000
79 A A 0.0000
80 Y A -0.6507
81 M A 0.0000
82 Q A -1.4063
83 L A 0.0000
84 S A -0.7618
85 S A -0.7243
86 L A 0.0000
87 T A -1.3627
88 S A -1.5570
89 E A -2.1119
90 D A -1.3198
91 S A -0.8305
92 A A -0.6548
93 A A -0.4788
94 Y A 0.0000
95 F A -0.1249
96 C A 0.0000
97 A A 0.0000
98 F A 0.0000
99 I A 0.3872
100 T A 0.3475
101 S A 0.5423
102 V A 1.1889
103 D A -0.4083
104 W A 0.7244
105 A A 0.3400
106 M A 0.4331
107 E A -0.0624
108 Y A 0.4508
109 W A 0.1155
110 G A 0.0000
111 Q A -1.3642
112 G A -0.7486
113 T A 0.0000
114 S A -0.4887
115 V A 0.0000
116 T A -0.2989
117 V A 0.0000
118 S A -0.5905
119 S A -0.6896
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Laboratory of Theory of Biopolymers 2018