| Chain sequence(s) |
A: MSHHHHHHSGMTTTFAPTAEGMMQMAVAFIAHMTANIPTLVTKAMEQGIEKYENKDPIYYWYGDNDYYWYTWKDDKYYIKDPGYYAFDEFEKIFFREMGDFWDQYWENMKFYDTASPAERTGMFVAYTVFETGYLVSHVAASVGLKTAAETTLSPAEATKAKAGIEKRFTEFTTDFVDGIERNTRNFESGKPPRRIWNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:11)
[INFO] Main: Simulation completed successfully. (00:05:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5422 | |
| 2 | S | A | -0.6212 | |
| 3 | H | A | -1.7475 | |
| 4 | H | A | -2.4553 | |
| 5 | H | A | -2.8622 | |
| 6 | H | A | -2.9862 | |
| 7 | H | A | -2.6754 | |
| 8 | H | A | -2.2819 | |
| 9 | S | A | 0.0000 | |
| 10 | G | A | -0.9449 | |
| 11 | M | A | -0.4196 | |
| 12 | T | A | -0.3056 | |
| 13 | T | A | -0.1288 | |
| 14 | T | A | -0.1206 | |
| 15 | F | A | 0.0000 | |
| 16 | A | A | -0.5248 | |
| 17 | P | A | -0.5684 | |
| 18 | T | A | -0.9207 | |
| 19 | A | A | -1.3557 | |
| 20 | E | A | -2.2658 | |
| 21 | G | A | 0.0000 | |
| 22 | M | A | 0.0000 | |
| 23 | M | A | -0.1661 | |
| 24 | Q | A | -0.9128 | |
| 25 | M | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | V | A | 1.6721 | |
| 28 | A | A | 0.7110 | |
| 29 | F | A | 0.0000 | |
| 30 | I | A | 1.1508 | |
| 31 | A | A | 0.6042 | |
| 32 | H | A | 0.1144 | |
| 33 | M | A | 0.0000 | |
| 34 | T | A | 0.0083 | |
| 35 | A | A | -0.1951 | |
| 36 | N | A | -0.4723 | |
| 37 | I | A | 0.0000 | |
| 38 | P | A | -0.5623 | |
| 39 | T | A | -0.5775 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | T | A | -1.1276 | |
| 43 | K | A | -1.6620 | |
| 44 | A | A | 0.0000 | |
| 45 | M | A | 0.0000 | |
| 46 | E | A | -2.6976 | |
| 47 | Q | A | -2.2254 | |
| 48 | G | A | 0.0000 | |
| 49 | I | A | -2.1879 | |
| 50 | E | A | -3.6518 | |
| 51 | K | A | -3.2088 | |
| 52 | Y | A | -2.5787 | |
| 53 | E | A | -3.7059 | |
| 54 | N | A | -3.6535 | |
| 55 | K | A | -3.6008 | |
| 56 | D | A | -2.2894 | |
| 57 | P | A | -0.6414 | |
| 58 | I | A | 0.0000 | |
| 59 | Y | A | 1.9452 | |
| 60 | Y | A | 1.7551 | |
| 61 | W | A | 1.1756 | |
| 62 | Y | A | 0.7099 | |
| 63 | G | A | -1.0518 | |
| 64 | D | A | -2.6139 | |
| 65 | N | A | -2.3469 | |
| 66 | D | A | -1.3386 | |
| 67 | Y | A | 1.0930 | |
| 68 | Y | A | 2.1268 | |
| 69 | W | A | 2.2474 | |
| 70 | Y | A | 0.3634 | |
| 71 | T | A | -0.6674 | |
| 72 | W | A | -1.6418 | |
| 73 | K | A | -2.7887 | |
| 74 | D | A | -2.3884 | |
| 75 | D | A | -3.0698 | |
| 76 | K | A | -2.6596 | |
| 77 | Y | A | -1.0910 | |
| 78 | Y | A | 0.0000 | |
| 79 | I | A | -0.7282 | |
| 80 | K | A | -1.4310 | |
| 81 | D | A | 0.0000 | |
| 82 | P | A | 0.0000 | |
| 83 | G | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | Y | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | F | A | 0.0000 | |
| 88 | D | A | 0.0000 | |
| 89 | E | A | 0.0000 | |
| 90 | F | A | 0.0000 | |
| 91 | E | A | -0.4637 | |
| 92 | K | A | -0.5495 | |
| 93 | I | A | 0.0000 | |
| 94 | F | A | 0.0000 | |
| 95 | F | A | -0.5099 | |
| 96 | R | A | -1.9911 | |
| 97 | E | A | 0.0000 | |
| 98 | M | A | 0.0000 | |
| 99 | G | A | -1.5022 | |
| 100 | D | A | -1.6064 | |
| 101 | F | A | 0.0000 | |
| 102 | W | A | -1.1726 | |
| 103 | D | A | -2.1630 | |
| 104 | Q | A | -1.5101 | |
| 105 | Y | A | 0.0000 | |
| 106 | W | A | -1.3261 | |
| 107 | E | A | -2.2516 | |
| 108 | N | A | 0.0000 | |
| 109 | M | A | 0.0000 | |
| 110 | K | A | -1.7838 | |
| 111 | F | A | -0.3683 | |
| 112 | Y | A | 0.0000 | |
| 113 | D | A | -2.2004 | |
| 114 | T | A | -1.0157 | |
| 115 | A | A | -1.0832 | |
| 116 | S | A | -1.0267 | |
| 117 | P | A | -1.2359 | |
| 118 | A | A | -1.0414 | |
| 119 | E | A | -1.8829 | |
| 120 | R | A | -1.5020 | |
| 121 | T | A | -0.6943 | |
| 122 | G | A | -0.7260 | |
| 123 | M | A | 0.0000 | |
| 124 | F | A | 0.5151 | |
| 125 | V | A | 1.1883 | |
| 126 | A | A | 0.0000 | |
| 127 | Y | A | 0.0000 | |
| 128 | T | A | 0.7693 | |
| 129 | V | A | 1.2573 | |
| 130 | F | A | 0.0000 | |
| 131 | E | A | 0.0000 | |
| 132 | T | A | 0.5815 | |
| 133 | G | A | 0.0000 | |
| 134 | Y | A | 0.0000 | |
| 135 | L | A | 1.2197 | |
| 136 | V | A | 1.2597 | |
| 137 | S | A | 0.0000 | |
| 138 | H | A | 0.0000 | |
| 139 | V | A | 1.6478 | |
| 140 | A | A | 1.1822 | |
| 141 | A | A | 0.0000 | |
| 142 | S | A | 0.0000 | |
| 143 | V | A | 1.5215 | |
| 144 | G | A | 0.4661 | |
| 145 | L | A | 0.0000 | |
| 146 | K | A | -0.7714 | |
| 147 | T | A | -0.5965 | |
| 148 | A | A | -0.8418 | |
| 149 | A | A | 0.0000 | |
| 150 | E | A | -2.2365 | |
| 151 | T | A | -1.0443 | |
| 152 | T | A | -0.9284 | |
| 153 | L | A | -0.8637 | |
| 154 | S | A | -0.9788 | |
| 155 | P | A | -1.1845 | |
| 156 | A | A | -1.1396 | |
| 157 | E | A | -1.8997 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -1.7303 | |
| 160 | K | A | -2.3346 | |
| 161 | A | A | 0.0000 | |
| 162 | K | A | -1.8651 | |
| 163 | A | A | -1.5263 | |
| 164 | G | A | 0.0000 | |
| 165 | I | A | 0.0000 | |
| 166 | E | A | -2.0077 | |
| 167 | K | A | -1.3292 | |
| 168 | R | A | 0.0000 | |
| 169 | F | A | -0.6490 | |
| 170 | T | A | -1.0627 | |
| 171 | E | A | -1.2493 | |
| 172 | F | A | 0.0000 | |
| 173 | T | A | -0.2676 | |
| 174 | T | A | -0.7853 | |
| 175 | D | A | -1.8568 | |
| 176 | F | A | 0.0000 | |
| 177 | V | A | 0.4955 | |
| 178 | D | A | -1.3093 | |
| 179 | G | A | 0.0000 | |
| 180 | I | A | -0.8518 | |
| 181 | E | A | -1.6723 | |
| 182 | R | A | -2.1639 | |
| 183 | N | A | 0.0000 | |
| 184 | T | A | -2.2320 | |
| 185 | R | A | -3.1459 | |
| 186 | N | A | -2.7157 | |
| 187 | F | A | -2.1525 | |
| 188 | E | A | -2.9040 | |
| 189 | S | A | -2.2075 | |
| 190 | G | A | -2.4056 | |
| 191 | K | A | -3.0310 | |
| 192 | P | A | -1.9914 | |
| 193 | P | A | 0.0000 | |
| 194 | R | A | -2.5179 | |
| 195 | R | A | -1.9979 | |
| 196 | I | A | 0.0000 | |
| 197 | W | A | -0.9370 | |
| 198 | N | A | -1.6805 | |
| 199 | S | A | -1.2544 |