| Chain sequence(s) |
A: GPLPLNPEPPLRPTSEYVTPTDLLYVAETDLITEEGHPFKDIIVDGKVVIPRVSAYDYRVFRLTLPDPNKLPLPSEDFVDPETEILIWRLLAFKIEVGGPLGVGTYGHPNFNRLGDVDNPTSPVHCGPDDTVALSYTPKRKQMFIIGDEPPTGKYVAPAEPAPGLPPGAVPPTKTVTTTIEHGDRADIGFGARDFAALEPDKDDVPDIIRDTTTKVPDYEGMRAEPYGRKMFTYDEYESSKAVKRYVRCGPDPVPLPSLPPPSPLYVPPPPWSPYAVRPPTDLFDLPDRGEITAADELFNRPYFLEKTEGLNQGVLWHNKLYVTVLDNTRAEIETITTQISTPAVNVYDPANYVTSKRYRREYRLSFIVQLCRIPLTPEILEELRRLDPSILIDANLPDVPKEEREDPLAGKKFIELDLTNKLSSDLEKYELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2040 | |
| 2 | P | A | 0.4297 | |
| 3 | L | A | 1.3972 | |
| 4 | P | A | 0.7029 | |
| 5 | L | A | 0.8663 | |
| 6 | N | A | -1.0004 | |
| 7 | P | A | -1.4746 | |
| 8 | E | A | -2.1662 | |
| 9 | P | A | -1.4467 | |
| 10 | P | A | -0.7934 | |
| 11 | L | A | -0.2498 | |
| 12 | R | A | -0.7679 | |
| 13 | P | A | -0.7122 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.3671 | |
| 16 | E | A | -2.0295 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.7235 | |
| 20 | P | A | -0.7779 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6285 | |
| 23 | L | A | -0.4935 | |
| 24 | L | A | -0.1494 | |
| 25 | Y | A | -0.0056 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1179 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4724 | |
| 31 | L | A | -0.0014 | |
| 32 | I | A | -0.0437 | |
| 33 | T | A | -0.8765 | |
| 34 | E | A | -1.4792 | |
| 35 | E | A | -2.1714 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.6152 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -1.0729 | |
| 40 | K | A | -1.7431 | |
| 41 | D | A | -0.4876 | |
| 42 | I | A | 1.5068 | |
| 43 | I | A | 2.5315 | |
| 44 | V | A | 1.8120 | |
| 45 | D | A | -0.8853 | |
| 46 | G | A | -0.4876 | |
| 47 | K | A | -0.1430 | |
| 48 | V | A | 1.9841 | |
| 49 | V | A | 2.5295 | |
| 50 | I | A | 1.1821 | |
| 51 | P | A | -0.1608 | |
| 52 | R | A | -1.2097 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | -1.2503 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2248 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3269 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.8541 | |
| 70 | K | A | -2.0032 | |
| 71 | L | A | -0.8460 | |
| 72 | P | A | -0.6616 | |
| 73 | L | A | -0.5880 | |
| 74 | P | A | -0.6650 | |
| 75 | S | A | -1.5130 | |
| 76 | E | A | -2.7863 | |
| 77 | D | A | -2.7992 | |
| 78 | F | A | -1.4421 | |
| 79 | V | A | -1.7511 | |
| 80 | D | A | -2.5944 | |
| 81 | P | A | -2.1781 | |
| 82 | E | A | -2.4244 | |
| 83 | T | A | -1.5731 | |
| 84 | E | A | -1.4867 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3959 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2244 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | E | A | -0.9568 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.7919 | |
| 99 | G | A | -1.0376 | |
| 100 | P | A | -0.3468 | |
| 101 | L | A | 0.3102 | |
| 102 | G | A | 0.1942 | |
| 103 | V | A | 0.5440 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.0632 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.4538 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.8292 | |
| 110 | N | A | -1.8794 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3711 | |
| 113 | R | A | -0.5761 | |
| 114 | L | A | -0.3537 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1219 | |
| 117 | V | A | -0.9040 | |
| 118 | D | A | -1.9702 | |
| 119 | N | A | -2.0079 | |
| 120 | P | A | -1.0529 | |
| 121 | T | A | -0.6588 | |
| 122 | S | A | -0.5347 | |
| 123 | P | A | 0.0889 | |
| 124 | V | A | 0.1679 | |
| 125 | H | A | -0.2010 | |
| 126 | C | A | -0.3552 | |
| 127 | G | A | -0.9560 | |
| 128 | P | A | -1.2510 | |
| 129 | D | A | -2.2573 | |
| 130 | D | A | -1.6839 | |
| 131 | T | A | -1.2827 | |
| 132 | V | A | -0.3562 | |
| 133 | A | A | -0.2102 | |
| 134 | L | A | -0.1303 | |
| 135 | S | A | -0.1826 | |
| 136 | Y | A | 0.0000 | |
| 137 | T | A | 0.0636 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | M | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.6325 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.2845 | |
| 155 | Y | A | -0.1936 | |
| 156 | V | A | -0.1267 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.7762 | |
| 159 | A | A | -1.5188 | |
| 160 | E | A | -2.2569 | |
| 161 | P | A | -0.9483 | |
| 162 | A | A | -0.5661 | |
| 163 | P | A | -0.5532 | |
| 164 | G | A | -0.3052 | |
| 165 | L | A | 0.4675 | |
| 166 | P | A | -0.0363 | |
| 167 | P | A | -0.2339 | |
| 168 | G | A | -0.1685 | |
| 169 | A | A | 0.7695 | |
| 170 | V | A | 1.7479 | |
| 171 | P | A | 0.3508 | |
| 172 | P | A | -0.6057 | |
| 173 | T | A | -0.9421 | |
| 174 | K | A | -1.7966 | |
| 175 | T | A | -0.6582 | |
| 176 | V | A | -0.2321 | |
| 177 | T | A | -0.2313 | |
| 178 | T | A | -0.1485 | |
| 179 | T | A | -0.6086 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1920 | |
| 182 | H | A | -1.0639 | |
| 183 | G | A | -0.7178 | |
| 184 | D | A | -0.6675 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.7001 | |
| 190 | F | A | -0.2824 | |
| 191 | G | A | -0.1418 | |
| 192 | A | A | -0.1650 | |
| 193 | R | A | -0.4623 | |
| 194 | D | A | -0.5372 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.1825 | |
| 197 | A | A | -0.4764 | |
| 198 | L | A | -0.1974 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -1.4807 | |
| 201 | D | A | -2.1398 | |
| 202 | K | A | -2.8734 | |
| 203 | D | A | -2.1856 | |
| 204 | D | A | -1.5424 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6334 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.1100 | |
| 211 | D | A | -2.0459 | |
| 212 | T | A | -1.1075 | |
| 213 | T | A | -0.5672 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0516 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.0829 | |
| 219 | Y | A | -1.4294 | |
| 220 | E | A | -2.5533 | |
| 221 | G | A | -1.8772 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -3.0255 | |
| 224 | A | A | -1.6289 | |
| 225 | E | A | -1.3153 | |
| 226 | P | A | -0.6082 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | K | A | -0.8655 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7457 | |
| 234 | Y | A | -0.3300 | |
| 235 | D | A | -0.5936 | |
| 236 | E | A | -0.8655 | |
| 237 | Y | A | -0.7035 | |
| 238 | E | A | -1.2480 | |
| 239 | S | A | -1.3630 | |
| 240 | S | A | -1.6305 | |
| 241 | K | A | -2.0310 | |
| 242 | A | A | -1.4694 | |
| 243 | V | A | -0.6122 | |
| 244 | K | A | -1.9784 | |
| 245 | R | A | -2.1906 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | C | A | -0.7374 | |
| 250 | G | A | -0.7182 | |
| 251 | P | A | -0.6055 | |
| 252 | D | A | -0.5410 | |
| 253 | P | A | 0.3395 | |
| 254 | V | A | 1.6292 | |
| 255 | P | A | 0.4032 | |
| 256 | L | A | 0.8582 | |
| 257 | P | A | 0.4492 | |
| 258 | S | A | 0.0824 | |
| 259 | L | A | 0.5640 | |
| 260 | P | A | -0.1688 | |
| 261 | P | A | 0.0969 | |
| 262 | P | A | 0.1930 | |
| 263 | S | A | 0.8259 | |
| 264 | P | A | 0.8505 | |
| 265 | L | A | 2.0317 | |
| 266 | Y | A | 2.0099 | |
| 267 | V | A | 2.1010 | |
| 268 | P | A | 1.1335 | |
| 269 | P | A | 0.8589 | |
| 270 | P | A | 0.4440 | |
| 271 | P | A | 0.6479 | |
| 272 | W | A | 1.3354 | |
| 273 | S | A | 1.0405 | |
| 274 | P | A | 0.7828 | |
| 275 | Y | A | 1.5659 | |
| 276 | A | A | 1.3155 | |
| 277 | V | A | 1.7299 | |
| 278 | R | A | 0.2199 | |
| 279 | P | A | -0.1906 | |
| 280 | P | A | -0.5328 | |
| 281 | T | A | -0.5450 | |
| 282 | D | A | -1.1470 | |
| 283 | L | A | 0.1559 | |
| 284 | F | A | -0.7558 | |
| 285 | D | A | -2.0242 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.3451 | |
| 289 | R | A | -1.2101 | |
| 290 | G | A | -1.4517 | |
| 291 | E | A | -1.7017 | |
| 292 | I | A | -0.4549 | |
| 293 | T | A | -0.4202 | |
| 294 | A | A | -0.0254 | |
| 295 | A | A | -0.2389 | |
| 296 | D | A | -0.5148 | |
| 297 | E | A | -0.5748 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3173 | |
| 301 | R | A | -1.0412 | |
| 302 | P | A | -0.3941 | |
| 303 | Y | A | 0.0210 | |
| 304 | F | A | -0.2069 | |
| 305 | L | A | -0.9245 | |
| 306 | E | A | -2.4226 | |
| 307 | K | A | -2.9000 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.5046 | |
| 310 | G | A | -1.5932 | |
| 311 | L | A | -0.5904 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -1.3096 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.6589 | |
| 319 | N | A | -0.7258 | |
| 320 | K | A | -0.8737 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.6739 | |
| 333 | I | A | -1.3732 | |
| 334 | E | A | -1.8402 | |
| 335 | T | A | -0.6146 | |
| 336 | I | A | 0.7324 | |
| 337 | T | A | 0.7389 | |
| 338 | T | A | 0.8746 | |
| 339 | Q | A | 0.7916 | |
| 340 | I | A | 2.0251 | |
| 341 | S | A | 0.7491 | |
| 342 | T | A | 0.1694 | |
| 343 | P | A | -0.1308 | |
| 344 | A | A | 0.3465 | |
| 345 | V | A | 0.7105 | |
| 346 | N | A | 0.0221 | |
| 347 | V | A | 1.7075 | |
| 348 | Y | A | 1.5205 | |
| 349 | D | A | -0.0142 | |
| 350 | P | A | 0.1896 | |
| 351 | A | A | 0.2586 | |
| 352 | N | A | 0.8441 | |
| 353 | Y | A | 1.2401 | |
| 354 | V | A | 1.7531 | |
| 355 | T | A | 0.6375 | |
| 356 | S | A | 0.0032 | |
| 357 | K | A | -0.8798 | |
| 358 | R | A | -1.6381 | |
| 359 | Y | A | 0.0000 | |
| 360 | R | A | -2.7753 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -1.0078 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -1.1213 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | F | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3918 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.7229 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8409 | |
| 376 | L | A | -0.8446 | |
| 377 | T | A | -0.8997 | |
| 378 | P | A | -1.4304 | |
| 379 | E | A | -2.3536 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.5816 | |
| 382 | E | A | -2.7133 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.1969 | |
| 386 | R | A | -1.6739 | |
| 387 | L | A | -0.9547 | |
| 388 | D | A | -1.0376 | |
| 389 | P | A | -1.2173 | |
| 390 | S | A | 0.0000 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | I | A | -1.6961 | |
| 394 | D | A | -2.0076 | |
| 395 | A | A | -1.2607 | |
| 396 | N | A | -2.0777 | |
| 397 | L | A | -1.6622 | |
| 398 | P | A | -1.7279 | |
| 399 | D | A | -2.0774 | |
| 400 | V | A | -1.5493 | |
| 401 | P | A | -2.1124 | |
| 402 | K | A | -3.6781 | |
| 403 | E | A | -4.0777 | |
| 404 | E | A | -4.2288 | |
| 405 | R | A | -3.9370 | |
| 406 | E | A | -3.4405 | |
| 407 | D | A | -2.3762 | |
| 408 | P | A | -1.3400 | |
| 409 | L | A | -1.0466 | |
| 410 | A | A | -1.3063 | |
| 411 | G | A | -1.3477 | |
| 412 | K | A | -2.0171 | |
| 413 | K | A | -2.4951 | |
| 414 | F | A | -1.3978 | |
| 415 | I | A | -1.0343 | |
| 416 | E | A | -1.9933 | |
| 417 | L | A | -1.6426 | |
| 418 | D | A | -2.4320 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3557 | |
| 421 | N | A | -1.7913 | |
| 422 | K | A | -1.6452 | |
| 423 | L | A | -0.5614 | |
| 424 | S | A | -0.8755 | |
| 425 | S | A | -0.7282 | |
| 426 | D | A | -1.8338 | |
| 427 | L | A | -1.7832 | |
| 428 | E | A | -3.2466 | |
| 429 | K | A | -3.2181 | |
| 430 | Y | A | -2.1966 | |
| 431 | E | A | -2.2065 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.8371 | |
| 435 | L | A | -1.1815 | |
| 436 | Y | A | -0.6486 | |
| 437 | L | A | -0.5488 | |
| 438 | N | A | -1.7601 | |
| 439 | R | A | -2.0203 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine