| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGLTFSRYPMSWVRQAPGKGLVWVSAITSSGGSTYYSDTVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARLPDYWGQGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASSSVSSSYLHWYQQKPGQAPRLLIYATSNLVAGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQHFSGYHFTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0098 | |
| 2 | V | H | -1.0158 | |
| 3 | Q | H | -0.8801 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9786 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1575 | |
| 8 | G | H | -0.5537 | |
| 9 | G | H | 0.2778 | |
| 11 | G | H | 0.8556 | |
| 12 | L | H | 1.4338 | |
| 13 | V | H | -0.0972 | |
| 14 | Q | H | -1.4377 | |
| 15 | P | H | -1.8576 | |
| 16 | G | H | -1.6123 | |
| 17 | G | H | -1.2691 | |
| 18 | S | H | -1.1223 | |
| 19 | L | H | -0.5410 | |
| 20 | R | H | -1.1971 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2036 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1199 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8787 | |
| 27 | G | H | -1.1541 | |
| 28 | L | H | -0.7419 | |
| 29 | T | H | -0.6859 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.4860 | |
| 36 | R | H | -1.8943 | |
| 37 | Y | H | -0.5791 | |
| 38 | P | H | -0.3369 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.1261 | |
| 45 | A | H | -0.7439 | |
| 46 | P | H | -0.7950 | |
| 47 | G | H | -1.4785 | |
| 48 | K | H | -2.0259 | |
| 49 | G | H | -0.9408 | |
| 50 | L | H | 0.0000 | |
| 51 | V | H | 0.8569 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.5541 | |
| 58 | S | H | -0.9826 | |
| 59 | S | H | -0.9316 | |
| 62 | G | H | -0.7021 | |
| 63 | G | H | -0.6511 | |
| 64 | S | H | -0.2080 | |
| 65 | T | H | 0.1228 | |
| 66 | Y | H | 0.1476 | |
| 67 | Y | H | -0.6642 | |
| 68 | S | H | -1.1940 | |
| 69 | D | H | -2.4914 | |
| 70 | T | H | -1.7018 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6296 | |
| 74 | G | H | -1.7866 | |
| 75 | R | H | -1.5397 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6765 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3675 | |
| 80 | R | H | -0.8752 | |
| 81 | D | H | -1.3484 | |
| 82 | N | H | -1.7035 | |
| 83 | A | H | -1.2783 | |
| 84 | K | H | -2.1969 | |
| 85 | N | H | -1.6308 | |
| 86 | T | H | -0.8863 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.2679 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7417 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3357 | |
| 93 | S | H | -1.4449 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.9319 | |
| 96 | A | H | -2.0002 | |
| 97 | E | H | -2.4303 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4461 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.8803 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | L | H | 0.9569 | |
| 115 | P | H | 0.4386 | |
| 116 | D | H | 0.2729 | |
| 117 | Y | H | 0.4814 | |
| 118 | W | H | 0.1476 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0418 | |
| 121 | G | H | -0.1155 | |
| 122 | T | H | 0.6023 | |
| 123 | L | H | 1.6118 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3046 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6798 | |
| 128 | S | H | -0.5632 | |
| 1 | E | L | -1.2029 | |
| 2 | I | L | 0.1254 | |
| 3 | V | L | 1.0013 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.6363 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8734 | |
| 8 | P | L | -0.5980 | |
| 9 | G | L | -0.8593 | |
| 10 | T | L | -0.6732 | |
| 11 | L | L | -0.2109 | |
| 12 | S | L | -0.2112 | |
| 13 | L | L | -0.4398 | |
| 14 | S | L | -0.8816 | |
| 15 | P | L | -1.3188 | |
| 16 | G | L | -1.8359 | |
| 17 | E | L | -2.2792 | |
| 18 | R | L | -2.9111 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6298 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9089 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1838 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.4445 | |
| 27 | S | L | -0.5948 | |
| 28 | S | L | -0.7900 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -0.0924 | |
| 36 | S | L | -0.1550 | |
| 37 | S | L | 0.1937 | |
| 38 | Y | L | 1.0413 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.6136 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5144 | |
| 46 | P | L | -1.1178 | |
| 47 | G | L | -1.4691 | |
| 48 | Q | L | -2.0849 | |
| 49 | A | L | -1.2673 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.9687 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.5133 | |
| 56 | A | L | 0.2264 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.6073 | |
| 66 | N | L | -0.7206 | |
| 67 | L | L | -0.1685 | |
| 68 | V | L | 0.1168 | |
| 69 | A | L | -0.0425 | |
| 70 | G | L | -0.4477 | |
| 71 | I | L | -0.3875 | |
| 72 | P | L | -0.9524 | |
| 74 | D | L | -1.9019 | |
| 75 | R | L | -1.8102 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7808 | |
| 78 | G | L | -0.4142 | |
| 79 | S | L | -0.7664 | |
| 80 | G | L | -1.0284 | |
| 83 | S | L | -1.0272 | |
| 84 | G | L | -1.0089 | |
| 85 | T | L | -1.4337 | |
| 86 | D | L | -1.9859 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7620 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7990 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.1153 | |
| 93 | R | L | -2.8686 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.8346 | |
| 96 | P | L | -1.1794 | |
| 97 | E | L | -1.9575 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2988 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3184 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | F | L | 0.7232 | |
| 108 | S | L | 0.4010 | |
| 109 | G | L | 0.2706 | |
| 114 | Y | L | 1.0054 | |
| 115 | H | L | 0.1956 | |
| 116 | F | L | 0.5708 | |
| 117 | T | L | 0.5218 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.5068 | |
| 121 | G | L | -0.8269 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.0991 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | 0.0330 | |
| 126 | I | L | 1.0140 | |
| 127 | K | L | -0.8157 |