Project name: query_structure

Status: done

Started: 2025-11-29 10:16:49
Settings
Chain sequence(s) A: GIPCGESCVWIPCLTSAIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-1.8385
Maximal score value
2.007
Average score
0.1532
Total score value
4.5952

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5289
2 I A 1.0524
3 P A 0.1425
4 C A 0.2808
5 G A -0.3306
6 E A -0.0310
7 S A 0.2912
8 C A 0.8757
9 V A 1.8376
10 W A 2.0070
11 I A 1.4730
12 P A 0.8830
13 C A 0.0000
14 L A 1.6625
15 T A 0.9952
16 S A 0.6459
17 A A 1.0479
18 I A 1.6287
19 G A 0.1151
20 C A 0.0000
21 S A -0.7235
22 C A -0.5464
23 K A -1.8385
24 S A -1.2672
25 K A -1.1437
26 V A -0.4953
27 C A 0.0000
28 Y A -0.6696
29 R A -1.1869
30 N A -1.5817
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Laboratory of Theory of Biopolymers 2018