| Chain sequence(s) |
B: AEKEQKREELYKKLLAAEKFKVRPVTPEQIEKAKKKAEAIIES
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -3.0005 | |
| 2 | E | B | -4.8192 | |
| 3 | K | B | -5.2984 | |
| 4 | E | B | -5.4126 | |
| 5 | Q | B | -5.5370 | |
| 6 | K | B | -5.6895 | |
| 7 | R | B | -5.1113 | |
| 8 | E | B | -4.6560 | |
| 9 | E | B | -4.1411 | |
| 10 | L | B | -1.5097 | |
| 11 | Y | B | -0.9051 | |
| 12 | K | B | -2.4957 | |
| 13 | K | B | -1.9635 | |
| 14 | L | B | -0.0957 | |
| 15 | L | B | -0.6208 | |
| 16 | A | B | -1.1803 | |
| 17 | A | B | -0.7356 | |
| 18 | E | B | -2.1802 | |
| 19 | K | B | -2.1097 | |
| 20 | F | B | -0.3091 | |
| 21 | K | B | -1.4068 | |
| 22 | V | B | 0.0059 | |
| 23 | R | B | -1.0653 | |
| 24 | P | B | 0.0611 | |
| 25 | V | B | 0.9025 | |
| 26 | T | B | -0.7163 | |
| 27 | P | B | -1.3119 | |
| 28 | E | B | -2.7978 | |
| 29 | Q | B | -2.2496 | |
| 30 | I | B | -1.6427 | |
| 31 | E | B | -4.1304 | |
| 32 | K | B | -4.7191 | |
| 33 | A | B | -3.6005 | |
| 34 | K | B | -4.4831 | |
| 35 | K | B | -4.6037 | |
| 36 | K | B | -3.5976 | |
| 37 | A | B | -2.2884 | |
| 38 | E | B | -2.9178 | |
| 39 | A | B | -1.2776 | |
| 40 | I | B | 0.8912 | |
| 41 | I | B | 0.9528 | |
| 42 | E | B | -0.9920 | |
| 43 | S | B | 0.0063 |