Project name: fold_rfinf_1_12024_10_30_13_27_model_2

Status: done

Started: 2026-03-26 11:52:04
Settings
Chain sequence(s) B: AEKEQKREELYKKLLAAEKFKVRPVTPEQIEKAKKKAEAIIES
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:17)
Show buried residues

Minimal score value
-5.6895
Maximal score value
0.9528
Average score
-2.2966
Total score value
-98.7518

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A B -3.0005
2 E B -4.8192
3 K B -5.2984
4 E B -5.4126
5 Q B -5.5370
6 K B -5.6895
7 R B -5.1113
8 E B -4.6560
9 E B -4.1411
10 L B -1.5097
11 Y B -0.9051
12 K B -2.4957
13 K B -1.9635
14 L B -0.0957
15 L B -0.6208
16 A B -1.1803
17 A B -0.7356
18 E B -2.1802
19 K B -2.1097
20 F B -0.3091
21 K B -1.4068
22 V B 0.0059
23 R B -1.0653
24 P B 0.0611
25 V B 0.9025
26 T B -0.7163
27 P B -1.3119
28 E B -2.7978
29 Q B -2.2496
30 I B -1.6427
31 E B -4.1304
32 K B -4.7191
33 A B -3.6005
34 K B -4.4831
35 K B -4.6037
36 K B -3.5976
37 A B -2.2884
38 E B -2.9178
39 A B -1.2776
40 I B 0.8912
41 I B 0.9528
42 E B -0.9920
43 S B 0.0063
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018