| Chain sequence(s) |
A: MGSSHHHHHHYYLEVDNKFNKEFYHAMKEILKLPNLNKYQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:58)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7649 | |
| 2 | G | A | -0.1787 | |
| 3 | S | A | -0.5283 | |
| 4 | S | A | -1.2534 | |
| 5 | H | A | -2.0539 | |
| 6 | H | A | -2.4391 | |
| 7 | H | A | -2.6112 | |
| 8 | H | A | -2.4771 | |
| 9 | H | A | -1.9318 | |
| 10 | H | A | -0.6940 | |
| 11 | Y | A | 1.3419 | |
| 12 | Y | A | 1.9590 | |
| 13 | L | A | 1.3271 | |
| 14 | E | A | -0.8525 | |
| 15 | V | A | -1.2387 | |
| 16 | D | A | -2.6151 | |
| 17 | N | A | -2.8817 | |
| 18 | K | A | -2.5597 | |
| 19 | F | A | -1.2087 | |
| 20 | N | A | -1.9896 | |
| 21 | K | A | -2.7702 | |
| 22 | E | A | -2.8394 | |
| 23 | F | A | 0.0000 | |
| 24 | Y | A | -1.0013 | |
| 25 | H | A | -2.1876 | |
| 26 | A | A | 0.0000 | |
| 27 | M | A | 0.0000 | |
| 28 | K | A | -1.5242 | |
| 29 | E | A | -1.8220 | |
| 30 | I | A | 0.0000 | |
| 31 | L | A | -1.0498 | |
| 32 | K | A | -1.7633 | |
| 33 | L | A | -1.3574 | |
| 34 | P | A | -0.9805 | |
| 35 | N | A | -1.4199 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.5004 | |
| 38 | K | A | -1.9466 | |
| 39 | Y | A | -0.6600 | |
| 40 | Q | A | -1.0241 | |
| 41 | K | A | -1.7171 | |
| 42 | E | A | -2.2505 | |
| 43 | A | A | -1.4073 | |
| 44 | F | A | 0.0000 | |
| 45 | K | A | -1.9408 | |
| 46 | T | A | -2.2002 | |
| 47 | S | A | -2.1491 | |
| 48 | L | A | 0.0000 | |
| 49 | K | A | -2.9768 | |
| 50 | D | A | -3.3863 | |
| 51 | D | A | -2.5748 | |
| 52 | P | A | -2.1531 | |
| 53 | S | A | -1.5204 | |
| 54 | Q | A | -1.9886 | |
| 55 | S | A | 0.0000 | |
| 56 | A | A | -1.3083 | |
| 57 | N | A | -1.7721 | |
| 58 | L | A | -1.6693 | |
| 59 | L | A | -1.5827 | |
| 60 | A | A | -1.8990 | |
| 61 | E | A | -2.9635 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.8585 | |
| 64 | K | A | -3.2287 | |
| 65 | L | A | -1.8765 | |
| 66 | N | A | 0.0000 | |
| 67 | D | A | -3.1441 | |
| 68 | A | A | -1.8517 | |
| 69 | Q | A | -1.8566 | |
| 70 | A | A | -1.4649 | |
| 71 | P | A | -1.2585 | |
| 72 | K | A | -1.7890 | |
| 73 | V | A | 0.0056 | |
| 74 | D | A | -1.5030 |