| Chain sequence(s) |
H: DVQLVESGGGLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEKGLEWVAYISSGGSSINYADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAIYYCTRGGTGTRSLYYFDYWGQGATLIVSS
L: DIQMTQITSSLSVSLGDRVIISCRASQDIGNFLNWYQQKPDGSLKLLIYYTSRLQSGVPSRFSGWGSGTDYSLTISNLEEEDIATFFCQQGKTLPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | H | -2.0677 | |
| 2 | V | H | -1.2070 | |
| 3 | Q | H | -1.1816 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1548 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2211 | |
| 8 | G | H | -0.7085 | |
| 9 | G | H | -0.1468 | |
| 11 | G | H | 0.6473 | |
| 12 | L | H | 1.3078 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.3725 | |
| 15 | P | H | -1.5122 | |
| 16 | G | H | -1.3750 | |
| 17 | G | H | -1.1930 | |
| 18 | S | H | -1.4390 | |
| 19 | R | H | -1.5185 | |
| 20 | K | H | -1.9936 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2386 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0222 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7143 | |
| 27 | G | H | -1.1934 | |
| 28 | F | H | -0.6299 | |
| 29 | T | H | -0.4845 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.2569 | |
| 36 | N | H | -1.3432 | |
| 37 | F | H | -0.4863 | |
| 38 | G | H | -0.2380 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8944 | |
| 45 | A | H | -1.5139 | |
| 46 | P | H | -1.5651 | |
| 47 | E | H | -2.8503 | |
| 48 | K | H | -2.9153 | |
| 49 | G | H | -1.6749 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9022 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.3591 | |
| 58 | S | H | -0.7560 | |
| 59 | G | H | -0.8959 | |
| 62 | G | H | -0.4679 | |
| 63 | S | H | -0.3056 | |
| 64 | S | H | -0.0398 | |
| 65 | I | H | 0.6036 | |
| 66 | N | H | -0.1862 | |
| 67 | Y | H | -0.7722 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.5268 | |
| 70 | T | H | -1.7011 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6537 | |
| 74 | G | H | -1.6587 | |
| 75 | R | H | -1.3983 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8534 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2966 | |
| 80 | R | H | -0.9238 | |
| 81 | D | H | -1.4345 | |
| 82 | N | H | -1.7327 | |
| 83 | P | H | -1.5238 | |
| 84 | K | H | -2.3179 | |
| 85 | N | H | -1.6369 | |
| 86 | T | H | -0.8568 | |
| 87 | L | H | 0.0000 | |
| 88 | F | H | -0.4022 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.7749 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -1.1629 | |
| 93 | S | H | -1.0930 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2838 | |
| 96 | S | H | -1.8511 | |
| 97 | E | H | -2.2752 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3711 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.4997 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | -0.0582 | |
| 108 | G | H | 0.0000 | |
| 109 | T | H | -0.7128 | |
| 110 | G | H | -0.7091 | |
| 111 | T | H | -0.9295 | |
| 111A | R | H | -1.9675 | |
| 112A | S | H | -1.2374 | |
| 112 | L | H | 0.0000 | |
| 113 | Y | H | -0.1411 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1572 | |
| 117 | Y | H | 0.0050 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1131 | |
| 121 | G | H | 0.0000 | |
| 122 | A | H | 0.0000 | |
| 123 | T | H | 0.3707 | |
| 124 | L | H | 0.0000 | |
| 125 | I | H | 0.7185 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6663 | |
| 128 | S | H | -0.5325 | |
| 1 | D | L | -2.1343 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2052 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5913 | |
| 6 | Q | L | 0.1094 | |
| 7 | I | L | 1.5216 | |
| 8 | T | L | 0.6283 | |
| 9 | S | L | -0.0905 | |
| 10 | S | L | -0.4754 | |
| 11 | L | L | -0.1026 | |
| 12 | S | L | -0.6398 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.8420 | |
| 15 | L | L | -0.5221 | |
| 16 | G | L | -1.5041 | |
| 17 | D | L | -1.7186 | |
| 18 | R | L | -1.9779 | |
| 19 | V | L | 0.0000 | |
| 20 | I | L | 1.5377 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | 0.3802 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1712 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1756 | |
| 27 | Q | L | -3.0678 | |
| 28 | D | L | -3.0966 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -1.4553 | |
| 37 | N | L | -0.8507 | |
| 38 | F | L | -0.5499 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.4199 | |
| 46 | P | L | -1.3097 | |
| 47 | D | L | -2.2214 | |
| 48 | G | L | -1.4274 | |
| 49 | S | L | -1.3393 | |
| 50 | L | L | 0.0000 | |
| 51 | K | L | -0.8362 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0298 | |
| 56 | Y | L | 0.0357 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.1099 | |
| 66 | R | L | -0.7043 | |
| 67 | L | L | -0.1748 | |
| 68 | Q | L | -0.4477 | |
| 69 | S | L | -0.4735 | |
| 70 | G | L | -0.4655 | |
| 71 | V | L | -0.2082 | |
| 72 | P | L | -0.2766 | |
| 74 | S | L | -0.3242 | |
| 75 | R | L | -0.9940 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.2006 | |
| 78 | G | L | 0.0000 | |
| 79 | W | L | 0.6963 | |
| 80 | G | L | -0.3366 | |
| 83 | S | L | -0.9790 | |
| 84 | G | L | -1.7573 | |
| 85 | T | L | -2.1526 | |
| 86 | D | L | -1.9072 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | 0.2913 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3875 | |
| 93 | N | L | -2.1691 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.6530 | |
| 96 | E | L | -2.8566 | |
| 97 | E | L | -2.9835 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -1.1391 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6116 | |
| 102 | F | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | K | L | -1.7253 | |
| 109 | T | L | -0.6542 | |
| 114 | L | L | 0.0193 | |
| 115 | P | L | -0.6556 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.8577 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1131 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1262 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0413 | |
| 126 | I | L | 0.4182 | |
| 127 | K | L | -1.0371 |