Project name: query_structure

Status: done

Started: 2026-03-16 20:43:23
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Chain sequence(s) A: MAGAQAQSRDRTNSKRYRSRVNIGLAFGRWRAMKSANGMKSDEEVAQRLLDAMKRLPSSSDSLGASDKKIKFSQSEVQTLIEQEVRSVLKNNETRLQGLYETIQHLERQVDYESSIKKLEARVNTVSERAEAALAYMAKKKKKSPLPSLVNVEIMRSESEDESKETRVPQKKMSMEHIDSKSGELNNLMETKQMAVDKMQAEKKALTAAVEDLNEERSPPPYGSPECKKEPDNTEVSMQLEEPKVKEECSSSGHSNCPERADLNQDKPLYPPLPATTFPSVCSIEAASYTIPQRPEVRLALIRNPPSLSVLWNVSQKEPSAPPMDSYSLYITMEKVKDSGVFPNWISVGEVKAIDLPMCVMISKYKPGRKVCVSVVGKDIFGRYGPYSEVVTADIPDTL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:48)
Show buried residues

Minimal score value
-4.7174
Maximal score value
2.422
Average score
-1.1803
Total score value
-470.951

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7207
2 A A -0.1641
3 G A -0.7318
4 A A -1.0452
5 Q A -2.3469
6 A A -2.4436
7 Q A -3.2548
8 S A -3.1783
9 R A -4.2563
10 D A -4.7174
11 R A -4.5917
12 T A -3.4213
13 N A -3.3740
14 S A -3.1649
15 K A -4.2030
16 R A -3.7312
17 Y A -1.5463
18 R A -2.8246
19 S A -2.1685
20 R A -2.0858
21 V A 0.1694
22 N A -0.4729
23 I A 0.2847
24 G A 0.5541
25 L A 1.2087
26 A A 0.0494
27 F A 0.0534
28 G A -1.1192
29 R A -1.9994
30 W A -1.4921
31 R A -2.6337
32 A A -1.6689
33 M A -1.2827
34 K A -2.3559
35 S A -1.5774
36 A A -0.7561
37 N A -1.3010
38 G A -1.3656
39 M A 0.0000
40 K A -2.7291
41 S A -2.5928
42 D A -3.5785
43 E A -3.5904
44 E A -3.0654
45 V A 0.0000
46 A A -1.7529
47 Q A -2.0483
48 R A -1.8583
49 L A -0.4208
50 L A 0.3969
51 D A -0.8474
52 A A -0.3918
53 M A 0.2336
54 K A -1.4920
55 R A -1.5289
56 L A 0.3164
57 P A -0.6165
58 S A -0.7779
59 S A -0.7077
60 S A -1.1766
61 D A -1.8660
62 S A -0.5480
63 L A 0.5802
64 G A -0.3025
65 A A -0.6261
66 S A -1.7147
67 D A -2.8750
68 K A -3.0826
69 K A -2.4988
70 I A 0.0687
71 K A -1.0368
72 F A 0.7228
73 S A -0.4581
74 Q A -1.4119
75 S A -0.9548
76 E A -0.9513
77 V A 0.0029
78 Q A -1.2772
79 T A -0.8879
80 L A -0.0184
81 I A -0.1118
82 E A -1.6480
83 Q A -1.8901
84 E A -1.8454
85 V A -0.6076
86 R A -2.2092
87 S A -1.8137
88 V A -0.6151
89 L A -0.9838
90 K A -2.8055
91 N A -2.5952
92 N A -2.8540
93 E A -3.1471
94 T A -2.4395
95 R A -2.6283
96 L A -1.2824
97 Q A -1.5422
98 G A -0.9841
99 L A 0.5901
100 Y A 0.6245
101 E A -1.3745
102 T A -0.5894
103 I A -0.2695
104 Q A -2.3102
105 H A -2.5692
106 L A -2.1013
107 E A -3.4010
108 R A -3.7114
109 Q A -2.7918
110 V A -1.9751
111 D A -2.5763
112 Y A -1.1419
113 E A -1.8508
114 S A -1.7088
115 S A -0.9960
116 I A -0.6614
117 K A -2.6331
118 K A -2.5424
119 L A -1.1156
120 E A -2.2616
121 A A -2.0018
122 R A -2.1004
123 V A -0.9029
124 N A -2.0991
125 T A -1.7257
126 V A -0.9762
127 S A -1.8512
128 E A -3.2128
129 R A -2.7449
130 A A -1.6456
131 E A -2.1015
132 A A -0.9651
133 A A -0.1151
134 L A 0.7065
135 A A 0.2525
136 Y A 0.5939
137 M A -0.2532
138 A A -1.4597
139 K A -3.2652
140 K A -3.8280
141 K A -4.1596
142 K A -4.3082
143 K A -3.9992
144 S A -2.4274
145 P A -0.6976
146 L A 1.0244
147 P A 0.8325
148 S A 1.1289
149 L A 2.3365
150 V A 1.9516
151 N A 0.4577
152 V A 1.3014
153 E A 0.0084
154 I A 1.5128
155 M A 0.7732
156 R A -1.5767
157 S A -1.8862
158 E A -3.0596
159 S A -2.9848
160 E A -3.6903
161 D A -3.9874
162 E A -3.6001
163 S A -2.7457
164 K A -3.1460
165 E A -3.1959
166 T A -1.9495
167 R A -1.4396
168 V A 0.4889
169 P A -0.8999
170 Q A -2.0940
171 K A -2.9392
172 K A -2.2320
173 M A -0.5159
174 S A -0.5440
175 M A 0.1767
176 E A -1.5818
177 H A -1.6081
178 I A -0.1708
179 D A -2.3396
180 S A -2.2009
181 K A -2.6172
182 S A -2.0180
183 G A -2.1019
184 E A -2.8789
185 L A -1.0504
186 N A -2.2695
187 N A -2.5679
188 L A -0.6811
189 M A -0.8344
190 E A -2.2336
191 T A -1.2914
192 K A -1.9796
193 Q A -1.5017
194 M A -0.5920
195 A A -0.8643
196 V A -0.8192
197 D A -1.9649
198 K A -2.7337
199 M A -1.9703
200 Q A -2.6510
201 A A -2.7043
202 E A -3.1933
203 K A -3.3277
204 K A -2.7233
205 A A -1.1815
206 L A -0.1508
207 T A -0.7263
208 A A -0.8237
209 A A -0.1907
210 V A 0.4437
211 E A -2.2625
212 D A -2.8357
213 L A -1.3889
214 N A -3.1398
215 E A -4.1970
216 E A -4.1687
217 R A -3.7097
218 S A -2.4976
219 P A -1.1810
220 P A -0.4716
221 P A 0.0580
222 Y A 0.8233
223 G A -0.0081
224 S A -0.7194
225 P A -1.4045
226 E A -2.0178
227 C A -1.4855
228 K A -3.0018
229 K A -3.3400
230 E A -3.4349
231 P A -2.5853
232 D A -2.9059
233 N A -2.6374
234 T A -1.6107
235 E A -1.2848
236 V A 0.9884
237 S A 0.4527
238 M A 1.1181
239 Q A -0.3670
240 L A -0.0644
241 E A -2.2266
242 E A -2.9086
243 P A -2.0271
244 K A -1.7789
245 V A -0.3414
246 K A -2.5590
247 E A -3.0591
248 E A -2.7842
249 C A -0.7350
250 S A -0.4192
251 S A -0.3677
252 S A -0.8158
253 G A -1.1581
254 H A -1.6731
255 S A -1.2882
256 N A -1.2950
257 C A -0.4335
258 P A -1.4903
259 E A -2.9395
260 R A -2.9868
261 A A -1.8881
262 D A -2.0602
263 L A -0.7733
264 N A -2.3923
265 Q A -2.8936
266 D A -3.2310
267 K A -2.6084
268 P A -0.6278
269 L A 0.9400
270 Y A 0.6832
271 P A 0.0970
272 P A -0.0441
273 L A 0.3148
274 P A 0.0818
275 A A 0.2835
276 T A 0.4707
277 T A 0.8631
278 F A 2.2186
279 P A 1.5659
280 S A 1.2456
281 V A 2.4220
282 C A 1.8565
283 S A 1.0527
284 I A 1.5536
285 E A -0.4425
286 A A 0.0000
287 A A 0.5067
288 S A 0.0002
289 Y A 0.3208
290 T A 0.4004
291 I A 0.8999
292 P A 0.0000
293 Q A -1.6510
294 R A -2.5689
295 P A 0.0000
296 E A -2.5585
297 V A -1.6704
298 R A -1.7172
299 L A -0.1064
300 A A -0.0019
301 L A -0.0410
302 I A -0.4012
303 R A -1.9934
304 N A -2.0545
305 P A -1.3728
306 P A -1.2158
307 S A 0.0000
308 L A 0.0000
309 S A 0.5548
310 V A 0.0000
311 L A -0.0290
312 W A 0.0000
313 N A -1.9417
314 V A -1.9182
315 S A -1.9203
316 Q A -2.5119
317 K A -2.8988
318 E A -2.2446
319 P A -1.2640
320 S A -0.5465
321 A A -0.5317
322 P A 0.0000
323 P A 0.6453
324 M A 0.5513
325 D A 0.2698
326 S A 0.0000
327 Y A 0.0000
328 S A 0.0000
329 L A 0.0000
330 Y A 0.4172
331 I A 0.0000
332 T A 0.0000
333 M A -0.8620
334 E A 0.0000
335 K A -1.6582
336 V A -0.4413
337 K A -2.5430
338 D A -2.7945
339 S A -1.0991
340 G A -0.9195
341 V A 0.4176
342 F A 0.0000
343 P A -0.3867
344 N A -1.0775
345 W A 0.0000
346 I A 1.2757
347 S A 0.2926
348 V A 0.1972
349 G A -0.7681
350 E A -2.0978
351 V A -0.9345
352 K A -1.5261
353 A A -0.2220
354 I A 0.7958
355 D A -0.7981
356 L A -0.2811
357 P A -0.3775
358 M A 0.0000
359 C A 0.8320
360 V A 1.1585
361 M A 0.9144
362 I A 0.0000
363 S A -0.9854
364 K A -1.9650
365 Y A -1.7218
366 K A -2.8425
367 P A -2.3719
368 G A -2.4900
369 R A -3.0345
370 K A -2.6353
371 V A 0.0000
372 C A 0.0000
373 V A 0.0000
374 S A 0.0000
375 V A 0.0000
376 V A 0.0000
377 G A 0.0000
378 K A -0.0661
379 D A 0.0000
380 I A 1.9864
381 F A 1.6540
382 G A 1.3940
383 R A 0.0000
384 Y A 0.7433
385 G A -0.0152
386 P A -0.7639
387 Y A -0.9015
388 S A 0.0000
389 E A -2.0742
390 V A -0.4810
391 V A -0.4648
392 T A -0.7642
393 A A -1.2428
394 D A -2.6674
395 I A 0.0000
396 P A -1.6586
397 D A -2.2804
398 T A -0.8069
399 L A -0.2707
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Laboratory of Theory of Biopolymers 2018