| Chain sequence(s) |
A: MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:21)
[INFO] Main: Simulation completed successfully. (00:05:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7738 | |
| 2 | S | A | 0.2180 | |
| 3 | G | A | 0.1173 | |
| 4 | G | A | 0.5637 | |
| 5 | V | A | 1.7877 | |
| 6 | Y | A | 1.0093 | |
| 7 | G | A | -0.2323 | |
| 8 | G | A | -1.5664 | |
| 9 | D | A | -2.8117 | |
| 10 | E | A | -2.7790 | |
| 11 | V | A | -1.1600 | |
| 12 | G | A | -0.6423 | |
| 13 | A | A | 0.0000 | |
| 14 | L | A | 0.0000 | |
| 15 | V | A | 0.0000 | |
| 16 | F | A | 0.0000 | |
| 17 | D | A | 0.0000 | |
| 18 | I | A | 0.2421 | |
| 19 | G | A | 0.4032 | |
| 20 | S | A | 0.3007 | |
| 21 | F | A | 1.5784 | |
| 22 | S | A | 0.3834 | |
| 23 | V | A | 0.0000 | |
| 24 | R | A | -0.6460 | |
| 25 | A | A | 0.0000 | |
| 26 | G | A | 0.0000 | |
| 27 | Y | A | -0.4806 | |
| 28 | A | A | -0.4149 | |
| 29 | G | A | -1.1581 | |
| 30 | E | A | -1.6288 | |
| 31 | D | A | -2.0254 | |
| 32 | C | A | -1.1463 | |
| 33 | P | A | 0.0000 | |
| 34 | K | A | -1.7570 | |
| 35 | A | A | 0.0000 | |
| 36 | D | A | -1.5890 | |
| 37 | F | A | 0.0000 | |
| 38 | P | A | 0.1373 | |
| 39 | T | A | 0.0000 | |
| 40 | T | A | 0.4213 | |
| 41 | V | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | L | A | -0.1675 | |
| 44 | L | A | -0.7789 | |
| 45 | A | A | -1.3606 | |
| 46 | A | A | -2.0384 | |
| 47 | E | A | -3.2674 | |
| 48 | E | A | -3.3389 | |
| 49 | G | A | -2.1074 | |
| 50 | G | A | -1.5465 | |
| 51 | G | A | -0.6874 | |
| 52 | L | A | 0.4622 | |
| 53 | E | A | -1.2144 | |
| 54 | L | A | -0.2277 | |
| 55 | E | A | -2.1696 | |
| 56 | G | A | -2.6893 | |
| 57 | D | A | -3.9955 | |
| 58 | K | A | -4.5541 | |
| 59 | E | A | -4.6174 | |
| 60 | K | A | -4.3963 | |
| 61 | K | A | -4.2540 | |
| 62 | G | A | -2.6875 | |
| 63 | K | A | -2.1680 | |
| 64 | I | A | 0.0041 | |
| 65 | F | A | 0.2011 | |
| 66 | H | A | -0.0473 | |
| 67 | I | A | 0.0000 | |
| 68 | D | A | -1.1034 | |
| 69 | T | A | -0.9466 | |
| 70 | N | A | -1.3115 | |
| 71 | A | A | -0.5368 | |
| 72 | L | A | 0.0000 | |
| 73 | H | A | -0.4730 | |
| 74 | V | A | 0.4634 | |
| 75 | P | A | -0.3171 | |
| 76 | R | A | -1.4044 | |
| 77 | D | A | -2.6552 | |
| 78 | G | A | -2.3256 | |
| 79 | A | A | 0.0000 | |
| 80 | E | A | -1.8063 | |
| 81 | V | A | -0.6019 | |
| 82 | M | A | -0.0841 | |
| 83 | S | A | -0.3020 | |
| 84 | P | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.5517 | |
| 87 | N | A | -2.2289 | |
| 88 | G | A | -1.1378 | |
| 89 | M | A | -1.4135 | |
| 90 | I | A | 0.0000 | |
| 91 | E | A | -2.9304 | |
| 92 | D | A | -2.3766 | |
| 93 | W | A | -1.8942 | |
| 94 | E | A | -2.4751 | |
| 95 | C | A | 0.0000 | |
| 96 | F | A | 0.0000 | |
| 97 | R | A | -1.7064 | |
| 98 | A | A | -0.9849 | |
| 99 | I | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | D | A | -1.9674 | |
| 102 | H | A | 0.0000 | |
| 103 | T | A | 0.0000 | |
| 104 | Y | A | 0.0000 | |
| 105 | S | A | -2.3903 | |
| 106 | K | A | -2.6397 | |
| 107 | H | A | -2.1790 | |
| 108 | V | A | 0.0000 | |
| 109 | K | A | -2.7254 | |
| 110 | S | A | -1.8456 | |
| 111 | E | A | -2.0640 | |
| 112 | P | A | -1.4161 | |
| 113 | N | A | -0.7855 | |
| 114 | L | A | 0.5594 | |
| 115 | H | A | 0.0542 | |
| 116 | P | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | M | A | 0.0000 | |
| 120 | S | A | -0.0180 | |
| 121 | E | A | 0.0000 | |
| 122 | A | A | 0.0000 | |
| 123 | P | A | 0.0000 | |
| 124 | W | A | -0.4308 | |
| 125 | N | A | -0.7757 | |
| 126 | T | A | -1.2233 | |
| 127 | R | A | -2.5762 | |
| 128 | A | A | -1.6598 | |
| 129 | K | A | -1.7759 | |
| 130 | R | A | 0.0000 | |
| 131 | E | A | -2.2171 | |
| 132 | K | A | -2.0813 | |
| 133 | L | A | 0.0000 | |
| 134 | T | A | 0.0000 | |
| 135 | E | A | -2.3420 | |
| 136 | L | A | 0.0000 | |
| 137 | M | A | 0.0000 | |
| 138 | F | A | 0.0000 | |
| 139 | E | A | -3.0967 | |
| 140 | Q | A | -2.5269 | |
| 141 | Y | A | 0.0000 | |
| 142 | N | A | -2.0806 | |
| 143 | I | A | 0.0000 | |
| 144 | P | A | -0.4780 | |
| 145 | A | A | -0.4866 | |
| 146 | F | A | 0.0000 | |
| 147 | F | A | 0.0000 | |
| 148 | L | A | 0.0000 | |
| 149 | C | A | 0.0000 | |
| 150 | K | A | 0.0000 | |
| 151 | T | A | 0.0075 | |
| 152 | A | A | 0.0000 | |
| 153 | V | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | T | A | 0.0000 | |
| 156 | A | A | 0.0000 | |
| 157 | F | A | 0.1939 | |
| 158 | A | A | -0.0338 | |
| 159 | N | A | -0.6533 | |
| 160 | G | A | -0.8737 | |
| 161 | R | A | -1.4685 | |
| 162 | S | A | -1.2271 | |
| 163 | T | A | -0.9538 | |
| 164 | G | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | V | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | D | A | -0.8105 | |
| 169 | S | A | 0.0000 | |
| 170 | G | A | -0.4790 | |
| 171 | A | A | -0.4866 | |
| 172 | T | A | -0.9596 | |
| 173 | H | A | -1.1330 | |
| 174 | T | A | 0.0000 | |
| 175 | T | A | 0.0000 | |
| 176 | A | A | 0.0000 | |
| 177 | I | A | 0.0000 | |
| 178 | P | A | 0.0000 | |
| 179 | V | A | 0.0000 | |
| 180 | H | A | -0.8503 | |
| 181 | D | A | -1.7442 | |
| 182 | G | A | -0.4806 | |
| 183 | Y | A | 0.5564 | |
| 184 | V | A | 0.1090 | |
| 185 | L | A | -0.5560 | |
| 186 | Q | A | -1.1402 | |
| 187 | Q | A | -1.5165 | |
| 188 | G | A | 0.0000 | |
| 189 | I | A | -0.3963 | |
| 190 | V | A | 0.0000 | |
| 191 | K | A | -0.9338 | |
| 192 | S | A | 0.0000 | |
| 193 | P | A | -0.8578 | |
| 194 | L | A | 0.0000 | |
| 195 | A | A | 0.0000 | |
| 196 | G | A | -0.8689 | |
| 197 | D | A | -1.7409 | |
| 198 | F | A | 0.0000 | |
| 199 | I | A | 0.0000 | |
| 200 | S | A | -1.0831 | |
| 201 | M | A | -0.5715 | |
| 202 | Q | A | 0.0000 | |
| 203 | C | A | 0.0000 | |
| 204 | R | A | -1.6083 | |
| 205 | E | A | -2.1428 | |
| 206 | L | A | -1.4394 | |
| 207 | F | A | 0.0000 | |
| 208 | Q | A | -2.6865 | |
| 209 | E | A | -2.4927 | |
| 210 | M | A | -1.2422 | |
| 211 | A | A | -1.2614 | |
| 212 | I | A | 0.0000 | |
| 213 | D | A | -1.8402 | |
| 214 | I | A | -0.9536 | |
| 215 | I | A | -0.3222 | |
| 216 | P | A | 0.0000 | |
| 217 | P | A | -0.2458 | |
| 218 | Y | A | -0.0406 | |
| 219 | M | A | -1.1132 | |
| 220 | I | A | -1.4913 | |
| 221 | A | A | -1.8420 | |
| 222 | A | A | -2.1944 | |
| 223 | K | A | -3.3912 | |
| 224 | E | A | -3.1805 | |
| 225 | P | A | -2.3726 | |
| 226 | V | A | -2.2131 | |
| 227 | R | A | -2.8104 | |
| 228 | E | A | -3.4370 | |
| 229 | G | A | -1.9875 | |
| 230 | A | A | -1.6392 | |
| 231 | P | A | -1.3064 | |
| 232 | P | A | -2.1810 | |
| 233 | N | A | -2.5664 | |
| 234 | W | A | -2.8004 | |
| 235 | K | A | -3.6764 | |
| 236 | K | A | -3.6078 | |
| 237 | K | A | -3.2820 | |
| 238 | E | A | -3.6483 | |
| 239 | K | A | -3.0337 | |
| 240 | L | A | -1.9562 | |
| 241 | P | A | -1.6936 | |
| 242 | Q | A | -2.2811 | |
| 243 | V | A | -1.7407 | |
| 244 | S | A | -2.1523 | |
| 245 | K | A | -2.4236 | |
| 246 | S | A | -1.5794 | |
| 247 | W | A | 0.0000 | |
| 248 | H | A | -1.5426 | |
| 249 | N | A | -1.6679 | |
| 250 | Y | A | -1.1565 | |
| 251 | M | A | 0.0000 | |
| 252 | C | A | 0.0000 | |
| 253 | N | A | -1.8076 | |
| 254 | E | A | -1.6172 | |
| 255 | V | A | 0.0000 | |
| 256 | I | A | 0.0000 | |
| 257 | Q | A | -1.9542 | |
| 258 | D | A | -2.1903 | |
| 259 | F | A | 0.0000 | |
| 260 | Q | A | 0.0000 | |
| 261 | A | A | -0.8732 | |
| 262 | S | A | -0.8742 | |
| 263 | V | A | 0.0000 | |
| 264 | L | A | 0.0000 | |
| 265 | Q | A | -1.0347 | |
| 266 | V | A | 0.0000 | |
| 267 | S | A | 0.0000 | |
| 268 | D | A | -2.5989 | |
| 269 | S | A | -1.3636 | |
| 270 | P | A | -1.1964 | |
| 271 | Y | A | -1.4678 | |
| 272 | D | A | -2.0725 | |
| 273 | E | A | -2.8698 | |
| 274 | Q | A | -2.0644 | |
| 275 | V | A | -0.6322 | |
| 276 | A | A | 0.0000 | |
| 277 | A | A | -1.2902 | |
| 278 | Q | A | -1.2939 | |
| 279 | M | A | -0.3370 | |
| 280 | P | A | -0.5469 | |
| 281 | T | A | -0.5842 | |
| 282 | V | A | -0.3140 | |
| 283 | H | A | -1.5652 | |
| 284 | Y | A | 0.0000 | |
| 285 | E | A | -2.3742 | |
| 286 | M | A | 0.0000 | |
| 287 | P | A | -0.6006 | |
| 288 | N | A | 0.0000 | |
| 289 | G | A | -2.0282 | |
| 290 | Y | A | -2.0242 | |
| 291 | N | A | -2.2930 | |
| 292 | T | A | 0.0000 | |
| 293 | D | A | -1.8161 | |
| 294 | Y | A | 0.0000 | |
| 295 | G | A | -0.6842 | |
| 296 | A | A | -1.1196 | |
| 297 | E | A | -0.9554 | |
| 298 | R | A | 0.0000 | |
| 299 | L | A | 0.0000 | |
| 300 | R | A | -1.4646 | |
| 301 | I | A | 0.0000 | |
| 302 | P | A | 0.0000 | |
| 303 | E | A | 0.0000 | |
| 304 | G | A | 0.0000 | |
| 305 | L | A | 0.0000 | |
| 306 | F | A | -0.2949 | |
| 307 | D | A | -0.7906 | |
| 308 | P | A | -0.7719 | |
| 309 | S | A | -1.0836 | |
| 310 | N | A | -1.1417 | |
| 311 | V | A | 0.0000 | |
| 312 | K | A | -1.6020 | |
| 313 | G | A | -1.0248 | |
| 314 | L | A | -0.6794 | |
| 315 | S | A | -0.8395 | |
| 316 | G | A | -1.0175 | |
| 317 | N | A | -1.3879 | |
| 318 | T | A | -0.6014 | |
| 319 | M | A | -0.3713 | |
| 320 | L | A | -0.2715 | |
| 321 | G | A | 0.0000 | |
| 322 | V | A | 0.0000 | |
| 323 | G | A | 0.0000 | |
| 324 | H | A | -0.9046 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | T | A | -0.5486 | |
| 328 | T | A | -0.1518 | |
| 329 | S | A | 0.0000 | |
| 330 | I | A | 0.0000 | |
| 331 | G | A | 0.0427 | |
| 332 | M | A | 0.2723 | |
| 333 | C | A | 0.0000 | |
| 334 | D | A | -1.3280 | |
| 335 | I | A | 0.2492 | |
| 336 | D | A | -1.4390 | |
| 337 | I | A | -0.8919 | |
| 338 | R | A | -0.8950 | |
| 339 | P | A | -0.8947 | |
| 340 | G | A | -0.9619 | |
| 341 | L | A | 0.0000 | |
| 342 | Y | A | 0.0000 | |
| 343 | G | A | -1.4099 | |
| 344 | S | A | 0.0000 | |
| 345 | V | A | 0.0000 | |
| 346 | I | A | 0.0000 | |
| 347 | V | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | G | A | 0.0000 | |
| 350 | G | A | -0.3780 | |
| 351 | N | A | 0.0000 | |
| 352 | T | A | 0.0000 | |
| 353 | L | A | -0.2647 | |
| 354 | L | A | -0.3883 | |
| 355 | Q | A | -1.6140 | |
| 356 | G | A | -1.7747 | |
| 357 | F | A | 0.0000 | |
| 358 | T | A | -1.4699 | |
| 359 | D | A | -2.8330 | |
| 360 | R | A | 0.0000 | |
| 361 | L | A | 0.0000 | |
| 362 | N | A | -2.3424 | |
| 363 | R | A | -2.3109 | |
| 364 | E | A | -2.0162 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -2.0387 | |
| 367 | Q | A | -2.1926 | |
| 368 | K | A | -2.1713 | |
| 369 | T | A | 0.0000 | |
| 370 | P | A | -1.0678 | |
| 371 | P | A | -1.0343 | |
| 372 | S | A | -0.7207 | |
| 373 | M | A | -1.3189 | |
| 374 | R | A | -2.3621 | |
| 375 | L | A | -1.9407 | |
| 376 | K | A | -2.1205 | |
| 377 | L | A | 0.0000 | |
| 378 | I | A | -0.4058 | |
| 379 | A | A | -0.5319 | |
| 380 | S | A | -0.9998 | |
| 381 | N | A | -1.4025 | |
| 382 | S | A | -1.0230 | |
| 383 | T | A | -0.7981 | |
| 384 | M | A | -0.8348 | |
| 385 | E | A | -1.4700 | |
| 386 | R | A | -1.2290 | |
| 387 | K | A | -1.2244 | |
| 388 | F | A | -0.8370 | |
| 389 | S | A | 0.0000 | |
| 390 | P | A | -0.1785 | |
| 391 | W | A | 0.0000 | |
| 392 | I | A | -0.2272 | |
| 393 | G | A | 0.0000 | |
| 394 | G | A | 0.0000 | |
| 395 | S | A | 0.0000 | |
| 396 | I | A | 0.7552 | |
| 397 | L | A | 0.0000 | |
| 398 | A | A | 0.0000 | |
| 399 | S | A | -0.3312 | |
| 400 | L | A | 0.4680 | |
| 401 | G | A | -0.7487 | |
| 402 | T | A | -0.2622 | |
| 403 | F | A | -0.1120 | |
| 404 | Q | A | -0.1542 | |
| 405 | Q | A | -1.0490 | |
| 406 | M | A | -0.2916 | |
| 407 | W | A | 0.0000 | |
| 408 | I | A | 0.0000 | |
| 409 | S | A | -1.5559 | |
| 410 | K | A | -2.5697 | |
| 411 | Q | A | -3.0379 | |
| 412 | E | A | -2.8874 | |
| 413 | Y | A | 0.0000 | |
| 414 | E | A | -3.9740 | |
| 415 | E | A | -3.6748 | |
| 416 | G | A | -2.7983 | |
| 417 | G | A | -2.6171 | |
| 418 | K | A | -2.7460 | |
| 419 | Q | A | -2.7940 | |
| 420 | C | A | 0.0000 | |
| 421 | V | A | 0.0000 | |
| 422 | E | A | -2.5343 | |
| 423 | R | A | -2.6336 | |
| 424 | K | A | -1.7148 | |
| 425 | C | A | 0.0000 | |
| 426 | P | A | -0.7333 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine