| Chain sequence(s) |
A: AACSDRAHGHICESFKSFCKDSGRNGVKLRANCKKTCGLC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.2052 | |
| 2 | A | A | 0.0519 | |
| 3 | C | A | -0.4581 | |
| 4 | S | A | -1.4444 | |
| 5 | D | A | -2.4850 | |
| 6 | R | A | -2.8479 | |
| 7 | A | A | -2.3135 | |
| 8 | H | A | -1.8522 | |
| 9 | G | A | -2.0286 | |
| 10 | H | A | -1.8286 | |
| 11 | I | A | -1.3817 | |
| 12 | C | A | 0.0000 | |
| 13 | E | A | -2.3167 | |
| 14 | S | A | -1.1361 | |
| 15 | F | A | -0.6365 | |
| 16 | K | A | -1.9911 | |
| 17 | S | A | -0.9043 | |
| 18 | F | A | -0.3641 | |
| 19 | C | A | 0.0000 | |
| 20 | K | A | -1.8047 | |
| 21 | D | A | -1.7068 | |
| 22 | S | A | -1.0573 | |
| 23 | G | A | -1.5024 | |
| 24 | R | A | -2.2401 | |
| 25 | N | A | -1.8858 | |
| 26 | G | A | 0.0000 | |
| 27 | V | A | -0.5461 | |
| 28 | K | A | -1.6454 | |
| 29 | L | A | 0.0000 | |
| 30 | R | A | -1.9713 | |
| 31 | A | A | -1.5823 | |
| 32 | N | A | -2.3682 | |
| 33 | C | A | 0.0000 | |
| 34 | K | A | -2.1895 | |
| 35 | K | A | -2.4141 | |
| 36 | T | A | -1.9171 | |
| 37 | C | A | -1.6847 | |
| 38 | G | A | -0.8357 | |
| 39 | L | A | 0.0762 | |
| 40 | C | A | 0.4725 |