Project name: be4127b6e185648

Status: done

Started: 2026-02-23 13:17:16
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Chain sequence(s) A: FFKGHFF
C: FFKGHFF
B: FFKGHFF
E: FFKGHFF
D: FFKGHFF
G: FFKGHFF
F: FFKGHFF
I: FFKGHFF
H: FFKGHFF
K: FFKGHFF
J: FFKGHFF
L: FFKGHFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:28)
Show buried residues

Minimal score value
-0.6906
Maximal score value
4.0743
Average score
1.6195
Total score value
136.0409

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.5595
2 F A 0.5584
3 K A -0.4913
4 G A 0.0000
5 H A 1.0311
6 F A 3.7655
7 F A 3.5923
1 F B 1.8556
2 F B 0.9011
3 K B -0.5090
4 G B 0.0000
5 H B 1.4933
6 F B 3.8349
7 F B 4.0594
1 F C 2.8342
2 F C 1.9668
3 K C -0.5941
4 G C -0.1007
5 H C 0.8591
6 F C 3.3331
7 F C 3.5010
1 F D 1.7803
2 F D 0.7042
3 K D -0.3290
4 G D 0.0000
5 H D 1.5725
6 F D 3.5455
7 F D 3.4549
1 F E 1.5972
2 F E 0.6314
3 K E -0.5027
4 G E 0.0000
5 H E 0.9737
6 F E 3.4238
7 F E 3.4731
1 F F 1.6314
2 F F 0.8348
3 K F 0.0237
4 G F 0.0000
5 H F 1.6172
6 F F 3.6203
7 F F 3.4379
1 F G 2.3077
2 F G 1.5059
3 K G 0.1699
4 G G 0.0000
5 H G 1.5058
6 F G 3.6511
7 F G 3.9100
1 F H 1.8779
2 F H 0.9360
3 K H -0.2734
4 G H 0.0000
5 H H 1.9588
6 F H 4.0611
7 F H 4.0087
1 F I 2.0398
2 F I 0.7137
3 K I -0.4869
4 G I 0.0000
5 H I 1.4715
6 F I 3.5692
7 F I 3.3802
1 F J 1.6675
2 F J 0.3383
3 K J -0.6906
4 G J 0.0000
5 H J 2.1591
6 F J 3.5824
7 F J 3.2951
1 F K 2.7320
2 F K 1.6044
3 K K -0.6650
4 G K 0.0000
5 H K 1.3344
6 F K 3.8407
7 F K 4.0743
1 F L 3.4379
2 F L 3.0982
3 K L -0.1776
4 G L -0.6169
5 H L 0.0623
6 F L 2.6346
7 F L 3.0824
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Laboratory of Theory of Biopolymers 2018