| Chain sequence(s) |
A: TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIEDHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:50)
[INFO] Main: Simulation completed successfully. (00:03:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | T | A | -0.4954 | |
| 6 | S | A | -0.9722 | |
| 7 | Q | A | -0.9563 | |
| 8 | V | A | -0.2536 | |
| 9 | R | A | -1.4708 | |
| 10 | Q | A | -1.9770 | |
| 11 | N | A | -2.6119 | |
| 12 | Y | A | 0.0000 | |
| 13 | H | A | -2.4416 | |
| 14 | Q | A | -2.4769 | |
| 15 | D | A | -2.4485 | |
| 16 | S | A | 0.0000 | |
| 17 | E | A | -1.5227 | |
| 18 | A | A | -1.2183 | |
| 19 | A | A | -1.3182 | |
| 20 | I | A | 0.0000 | |
| 21 | N | A | -0.2400 | |
| 22 | R | A | -1.0500 | |
| 23 | Q | A | 0.0000 | |
| 24 | I | A | 0.0000 | |
| 25 | N | A | -0.5073 | |
| 26 | L | A | -0.3042 | |
| 27 | E | A | 0.0000 | |
| 28 | L | A | -0.5189 | |
| 29 | Y | A | -0.1133 | |
| 30 | A | A | 0.0000 | |
| 31 | S | A | 0.0000 | |
| 32 | Y | A | 0.3589 | |
| 33 | V | A | 0.0000 | |
| 34 | Y | A | 0.0000 | |
| 35 | L | A | 0.8577 | |
| 36 | S | A | 0.0449 | |
| 37 | M | A | 0.0000 | |
| 38 | S | A | 0.0000 | |
| 39 | Y | A | 0.3094 | |
| 40 | Y | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | D | A | -2.8577 | |
| 43 | R | A | -2.9395 | |
| 44 | D | A | -3.3729 | |
| 45 | D | A | -3.0031 | |
| 46 | V | A | -1.9803 | |
| 47 | A | A | -1.8390 | |
| 48 | L | A | -1.6745 | |
| 49 | K | A | -2.3821 | |
| 50 | N | A | -1.7742 | |
| 51 | F | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | K | A | -1.7365 | |
| 54 | Y | A | -0.9152 | |
| 55 | F | A | 0.0000 | |
| 56 | L | A | -0.4814 | |
| 57 | H | A | -1.6789 | |
| 58 | Q | A | -1.5809 | |
| 59 | S | A | 0.0000 | |
| 60 | H | A | -2.4014 | |
| 61 | E | A | -2.9329 | |
| 62 | E | A | 0.0000 | |
| 63 | R | A | -2.7469 | |
| 64 | E | A | -3.5617 | |
| 65 | H | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | E | A | -3.1846 | |
| 68 | K | A | -2.6092 | |
| 69 | L | A | 0.0000 | |
| 70 | M | A | -2.0160 | |
| 71 | K | A | -2.9413 | |
| 72 | L | A | 0.0000 | |
| 73 | Q | A | 0.0000 | |
| 74 | N | A | -2.6575 | |
| 75 | Q | A | -2.3607 | |
| 76 | R | A | -2.1123 | |
| 77 | G | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | R | A | -1.4024 | |
| 80 | I | A | 0.4916 | |
| 81 | F | A | 2.0379 | |
| 82 | L | A | 1.2956 | |
| 83 | Q | A | -1.1511 | |
| 84 | D | A | -2.3008 | |
| 85 | I | A | -1.2134 | |
| 86 | Q | A | -2.4755 | |
| 87 | K | A | -2.8200 | |
| 88 | P | A | -1.9899 | |
| 89 | D | A | -2.8152 | |
| 90 | C | A | -2.4157 | |
| 91 | D | A | -3.3174 | |
| 92 | D | A | -3.3038 | |
| 93 | W | A | 0.0000 | |
| 94 | E | A | -2.6434 | |
| 95 | S | A | -1.7024 | |
| 96 | G | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | N | A | -1.3408 | |
| 99 | A | A | 0.0000 | |
| 100 | M | A | 0.0000 | |
| 101 | E | A | -1.3880 | |
| 102 | C | A | -0.7882 | |
| 103 | A | A | 0.0000 | |
| 104 | L | A | -1.4432 | |
| 105 | H | A | -1.8247 | |
| 106 | L | A | 0.0000 | |
| 107 | E | A | 0.0000 | |
| 108 | K | A | -2.1225 | |
| 109 | N | A | -2.3754 | |
| 110 | V | A | 0.0000 | |
| 111 | N | A | -1.3696 | |
| 112 | Q | A | -1.9931 | |
| 113 | S | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | L | A | -1.3478 | |
| 116 | E | A | -2.3412 | |
| 117 | L | A | 0.0000 | |
| 118 | H | A | -2.1139 | |
| 119 | K | A | -2.8439 | |
| 120 | L | A | -2.3235 | |
| 121 | A | A | 0.0000 | |
| 122 | T | A | -2.4705 | |
| 123 | D | A | -2.9323 | |
| 124 | K | A | -3.0198 | |
| 125 | N | A | -2.7393 | |
| 126 | D | A | 0.0000 | |
| 127 | P | A | -1.6129 | |
| 128 | H | A | -1.7717 | |
| 129 | L | A | 0.0000 | |
| 130 | C | A | -2.0881 | |
| 131 | D | A | -2.9772 | |
| 132 | F | A | -1.9521 | |
| 133 | I | A | 0.0000 | |
| 134 | E | A | -3.0012 | |
| 135 | D | A | -3.2393 | |
| 136 | H | A | -2.1716 | |
| 137 | Y | A | 0.0000 | |
| 138 | L | A | -1.1971 | |
| 139 | N | A | -1.5164 | |
| 140 | E | A | -1.4655 | |
| 141 | Q | A | 0.0000 | |
| 142 | V | A | -0.1107 | |
| 143 | K | A | -1.9720 | |
| 144 | A | A | -1.4165 | |
| 145 | I | A | -1.3739 | |
| 146 | K | A | -2.4232 | |
| 147 | E | A | -2.3289 | |
| 148 | L | A | 0.0000 | |
| 149 | G | A | -1.7786 | |
| 150 | D | A | -1.9153 | |
| 151 | H | A | -1.6332 | |
| 152 | V | A | -1.5648 | |
| 153 | T | A | -1.4946 | |
| 154 | N | A | -1.5099 | |
| 155 | L | A | 0.0000 | |
| 156 | R | A | -2.4918 | |
| 157 | K | A | -2.3316 | |
| 158 | M | A | -1.0302 | |
| 159 | G | A | -1.3850 | |
| 160 | A | A | 0.0000 | |
| 161 | P | A | -1.6258 | |
| 162 | E | A | -2.0328 | |
| 163 | S | A | -0.7486 | |
| 164 | G | A | 0.0118 | |
| 165 | L | A | 1.5398 | |
| 166 | A | A | 0.0000 | |
| 167 | E | A | 0.2972 | |
| 168 | Y | A | 1.0756 | |
| 169 | L | A | 0.6287 | |
| 170 | F | A | 0.0000 | |
| 171 | D | A | 0.0000 | |
| 172 | K | A | -1.7209 | |
| 173 | H | A | -1.4514 | |
| 174 | T | A | -0.9131 | |
| 175 | L | A | -0.9980 | |
| 176 | G | A | -1.5167 |