| Chain sequence(s) |
A: MAQVQLVESGGGLVQAGDSLRLSSAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKTVYLQMNSLKPEDTAVYSSAAKSVLTIATMRVPDEYNYWGQGTQVTVSKEAI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5477 | |
| 2 | A | A | -0.5134 | |
| 3 | Q | A | -1.5073 | |
| 4 | V | A | -1.1554 | |
| 5 | Q | A | -1.2191 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.3474 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.7457 | |
| 10 | G | A | -1.0191 | |
| 11 | G | A | -0.8436 | |
| 12 | G | A | -0.2134 | |
| 13 | L | A | 1.1272 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.7635 | |
| 16 | A | A | -2.3406 | |
| 17 | G | A | -2.0229 | |
| 18 | D | A | -2.0899 | |
| 19 | S | A | -1.7073 | |
| 20 | L | A | -1.2560 | |
| 21 | R | A | -2.0243 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4946 | |
| 24 | S | A | 0.0000 | |
| 25 | A | A | -0.4456 | |
| 26 | A | A | -1.0619 | |
| 27 | S | A | -1.0645 | |
| 28 | G | A | -1.6168 | |
| 29 | R | A | -2.2869 | |
| 30 | T | A | -1.7243 | |
| 31 | F | A | 0.0000 | |
| 32 | E | A | -1.9229 | |
| 33 | N | A | -1.5348 | |
| 34 | Y | A | -0.4488 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -2.7963 | |
| 42 | A | A | -2.3532 | |
| 43 | P | A | -1.5891 | |
| 44 | G | A | -2.1240 | |
| 45 | K | A | -3.6307 | |
| 46 | E | A | -3.9951 | |
| 47 | R | A | -3.5742 | |
| 48 | E | A | -2.2805 | |
| 49 | F | A | -1.0987 | |
| 50 | V | A | 0.0000 | |
| 51 | G | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | W | A | -0.3125 | |
| 56 | G | A | -1.2395 | |
| 57 | G | A | -1.3332 | |
| 58 | G | A | -1.5377 | |
| 59 | R | A | -1.8738 | |
| 60 | T | A | -0.7944 | |
| 61 | Y | A | -0.5966 | |
| 62 | Y | A | -1.0892 | |
| 63 | A | A | -1.7352 | |
| 64 | D | A | -2.8393 | |
| 65 | N | A | -2.4512 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.8659 | |
| 68 | G | A | -1.9115 | |
| 69 | R | A | -1.4943 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8209 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.7087 | |
| 74 | R | A | -1.1399 | |
| 75 | D | A | -1.8174 | |
| 76 | N | A | -1.9844 | |
| 77 | A | A | -1.5375 | |
| 78 | K | A | -2.3393 | |
| 79 | K | A | -2.2148 | |
| 80 | T | A | -1.2020 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.5973 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.1549 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.6491 | |
| 87 | S | A | -1.5380 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.6866 | |
| 90 | P | A | -2.3670 | |
| 91 | E | A | -2.2625 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.9860 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.7200 | |
| 96 | Y | A | 0.0000 | |
| 97 | S | A | -0.5846 | |
| 98 | S | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | K | A | 0.0000 | |
| 102 | S | A | -0.4001 | |
| 103 | V | A | 0.7040 | |
| 104 | L | A | 1.7125 | |
| 105 | T | A | 1.2860 | |
| 106 | I | A | 1.0397 | |
| 107 | A | A | 0.6547 | |
| 108 | T | A | 0.0135 | |
| 109 | M | A | 0.0000 | |
| 110 | R | A | -0.8662 | |
| 111 | V | A | -0.6534 | |
| 112 | P | A | -1.5816 | |
| 113 | D | A | -2.4430 | |
| 114 | E | A | -2.1543 | |
| 115 | Y | A | 0.0000 | |
| 116 | N | A | -1.6917 | |
| 117 | Y | A | -0.5966 | |
| 118 | W | A | -0.1276 | |
| 119 | G | A | -0.3491 | |
| 120 | Q | A | -1.1393 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | -0.7783 | |
| 123 | Q | A | -1.1993 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.4925 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -1.7485 | |
| 128 | K | A | -2.8595 | |
| 129 | E | A | -2.3347 | |
| 130 | A | A | -0.5451 | |
| 131 | I | A | 1.2820 |