Project name: be55f3007862e09

Status: done

Started: 2026-07-18 18:44:18
Settings
Chain sequence(s) A: MDAMKRGLCCVLLLCGAVFVSPEAAAKAKFVAAWTLKAAAAAYYVKVNIRDIAAYLYIEDLLSRAAYAVYNPALGYAAYRNQAAKGETAAYSSQESLSDLAAYDACLGLLAVAAYYTDASFANRGPGPGRNQAAKGETRCFAKVGPGPGSQESLSDLGAIESLRGPGPGLLLLYIEDLLSRCSSGPGPGLLNYAVYNPALGYSQGPGPGRIKILCATYVKVNIRGPGPGSDACLGLLAVAAVAAGPGPGVYREYTDASFANRKEGPGPGYTDASFANRKERGPEEEIFMYLLTVFLITQMIGSALFAV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:54)
Show buried residues

Minimal score value
-3.6057
Maximal score value
3.3593
Average score
-0.4329
Total score value
-133.321

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.0653
2 D A -1.0965
3 A A -0.0401
4 M A 0.2894
5 K A -0.7993
6 R A -0.0715
7 G A 0.9007
8 L A 2.1068
9 C A 1.7328
10 C A 0.0000
11 V A 2.5746
12 L A 3.1013
13 L A 2.3582
14 L A 2.3394
15 C A 2.5887
16 G A 2.2195
17 A A 0.0000
18 V A 3.3593
19 F A 3.2868
20 V A 2.0977
21 S A 0.3617
22 P A -0.5522
23 E A -2.1571
24 A A -0.9416
25 A A 0.0000
26 A A -0.8191
27 K A -2.0098
28 A A -0.2743
29 K A 0.0000
30 F A 0.0000
31 V A 0.3782
32 A A 0.0000
33 A A 0.1323
34 W A 0.5367
35 T A 0.2127
36 L A 0.0000
37 K A -0.8262
38 A A -0.2324
39 A A 0.0000
40 A A 0.0000
41 A A 0.2040
42 A A 0.1862
43 Y A 0.0000
44 Y A 0.0000
45 V A 0.8466
46 K A -0.5900
47 V A -0.2824
48 N A -0.5198
49 I A 0.6828
50 R A -1.1746
51 D A -0.5981
52 I A 0.6605
53 A A 0.5835
54 A A 0.6384
55 Y A 0.0000
56 L A 1.5255
57 Y A 1.3992
58 I A 0.0000
59 E A -0.7944
60 D A -1.8083
61 L A -0.8717
62 L A 0.0000
63 S A -1.3867
64 R A -1.9952
65 A A 0.0000
66 A A -0.4071
67 Y A 0.2322
68 A A 0.0000
69 V A 0.0000
70 Y A 0.6957
71 N A 0.5140
72 P A 0.5446
73 A A 0.6679
74 L A 1.5133
75 G A 0.1508
76 Y A 0.1323
77 A A -0.2494
78 A A -0.5635
79 Y A -0.7845
80 R A -1.9529
81 N A -2.3843
82 Q A -2.0155
83 A A -1.4565
84 A A -1.6574
85 K A -2.6034
86 G A -2.1155
87 E A -2.6531
88 T A -1.1525
89 A A -0.3695
90 A A -0.3296
91 Y A 0.6842
92 S A 0.2034
93 S A -0.5355
94 Q A -1.1984
95 E A -1.0113
96 S A -0.1278
97 L A 0.5625
98 S A -0.3001
99 D A 0.1452
100 L A 0.0000
101 A A -0.0610
102 A A -0.0492
103 Y A 0.0000
104 D A 0.0000
105 A A 0.0000
106 C A 0.0000
107 L A 0.0000
108 G A 0.0000
109 L A 0.0000
110 L A 0.0000
111 A A 0.0000
112 V A 0.0000
113 A A 0.0000
114 A A 0.0000
115 Y A 0.1850
116 Y A 0.0000
117 T A 0.0000
118 D A -0.5525
119 A A 0.0000
120 S A 0.0000
121 F A -1.1684
122 A A -2.0344
123 N A -1.8170
124 R A -2.3282
125 G A -1.9274
126 P A -1.2936
127 G A -1.6809
128 P A -2.0654
129 G A -1.8151
130 R A -2.3963
131 N A -2.9047
132 Q A -2.4113
133 A A 0.0000
134 A A -2.9986
135 K A -3.0478
136 G A -2.7461
137 E A -3.6057
138 T A -2.5988
139 R A -2.6481
140 C A 0.0000
141 F A -0.7973
142 A A -0.8109
143 K A -1.4644
144 V A 0.0000
145 G A 0.0000
146 P A -1.1733
147 G A -1.0652
148 P A -1.0999
149 G A -1.1967
150 S A -1.4064
151 Q A -1.8803
152 E A -1.9059
153 S A -1.1714
154 L A -0.2535
155 S A -0.9419
156 D A -2.2156
157 L A -0.9965
158 G A -1.6030
159 A A -1.1890
160 I A 0.0000
161 E A -2.8362
162 S A -1.5868
163 L A 0.0000
164 R A -2.6805
165 G A -1.3068
166 P A 0.0000
167 G A 0.0000
168 P A -0.1361
169 G A 0.0887
170 L A 0.9373
171 L A 0.0000
172 L A 0.7142
173 L A 1.0354
174 Y A 0.3007
175 I A 0.0000
176 E A -1.6874
177 D A -2.2973
178 L A -1.6064
179 L A 0.0000
180 S A -2.3029
181 R A -2.6972
182 C A 0.0000
183 S A -1.4191
184 S A -0.9962
185 G A -0.7767
186 P A -0.4000
187 G A -0.0713
188 P A -0.2497
189 G A 0.0000
190 L A 0.2553
191 L A 0.0000
192 N A -0.7873
193 Y A 0.5676
194 A A 0.0000
195 V A 0.3031
196 Y A -0.1031
197 N A -0.6397
198 P A -0.0774
199 A A 0.0030
200 L A -0.4879
201 G A -0.3912
202 Y A 0.6969
203 S A 0.0000
204 Q A -1.3979
205 G A -1.0668
206 P A -1.0542
207 G A -0.9283
208 P A -0.9503
209 G A -0.9809
210 R A -1.0402
211 I A 0.0000
212 K A -0.9951
213 I A -0.5064
214 L A -0.0437
215 C A -0.2218
216 A A -0.2725
217 T A 0.0000
218 Y A -0.1272
219 V A 0.0000
220 K A -1.7703
221 V A -0.8013
222 N A -1.5924
223 I A -0.9372
224 R A -2.0698
225 G A -1.6637
226 P A -1.2365
227 G A -1.1414
228 P A -1.2499
229 G A -1.1689
230 S A -1.4811
231 D A -1.5087
232 A A 0.0000
233 C A 0.0000
234 L A 0.1625
235 G A 0.0000
236 L A 0.0000
237 L A 0.0000
238 A A 0.0395
239 V A 0.0000
240 A A 0.0000
241 A A 0.0000
242 V A 0.0000
243 A A 0.0000
244 A A 0.0000
245 G A 0.0000
246 P A 0.0708
247 G A 0.0000
248 P A -0.5587
249 G A -1.0021
250 V A 0.0000
251 Y A -0.4867
252 R A 0.0000
253 E A -1.1525
254 Y A -0.8797
255 T A -0.9603
256 D A -0.9511
257 A A -0.3904
258 S A -0.1334
259 F A 0.1412
260 A A -0.3830
261 N A -1.8030
262 R A -2.1119
263 K A -2.1318
264 E A -2.2507
265 G A -1.6322
266 P A -1.3652
267 G A -1.3914
268 P A -0.9884
269 G A -0.9137
270 Y A 0.0000
271 T A -0.1530
272 D A -0.1934
273 A A 0.0274
274 S A -0.1195
275 F A -0.0426
276 A A -0.4680
277 N A -1.3156
278 R A 0.0000
279 K A -2.4170
280 E A -2.0809
281 R A -1.9582
282 G A -1.5370
283 P A -1.2067
284 E A -1.5331
285 E A -0.7764
286 E A -0.4194
287 I A 1.1849
288 F A 0.7907
289 M A 0.0000
290 Y A 0.9318
291 L A 1.1131
292 L A 0.0000
293 T A 0.0000
294 V A 0.5911
295 F A 0.0000
296 L A 0.0000
297 I A 0.0000
298 T A 0.2999
299 Q A 0.0601
300 M A 0.0000
301 I A -0.0222
302 G A 0.6750
303 S A 0.0000
304 A A 0.0000
305 L A 1.3633
306 F A 1.5671
307 A A 1.4787
308 V A 2.1835
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Laboratory of Theory of Biopolymers 2018