| Chain sequence(s) |
A: MSHHHHHHSGMPDETPFEEFFSKLPEFIKKGKEAVESEEMKKLMPEEEREKVLKALENIEKLVSKNTKAVKIALKIIYLNIKDETASEEEKEKLDREWHELVMEYMSLSEEDREEFHELNHNMHIVFEAIERYPILKPVLEILKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:05)
[INFO] Main: Simulation completed successfully. (00:05:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5622 | |
| 2 | S | A | -0.6128 | |
| 3 | H | A | -1.7451 | |
| 4 | H | A | -2.3361 | |
| 5 | H | A | -2.7460 | |
| 6 | H | A | -2.7494 | |
| 7 | H | A | -2.5731 | |
| 8 | H | A | -2.0333 | |
| 9 | S | A | -1.1511 | |
| 10 | G | A | -0.9582 | |
| 11 | M | A | -0.3644 | |
| 12 | P | A | -1.3228 | |
| 13 | D | A | -2.8870 | |
| 14 | E | A | -3.2179 | |
| 15 | T | A | -2.1532 | |
| 16 | P | A | -1.5321 | |
| 17 | F | A | -1.3595 | |
| 18 | E | A | -2.5996 | |
| 19 | E | A | -2.2426 | |
| 20 | F | A | 0.0000 | |
| 21 | F | A | -0.8581 | |
| 22 | S | A | -1.2938 | |
| 23 | K | A | -1.4073 | |
| 24 | L | A | 0.0000 | |
| 25 | P | A | -2.0587 | |
| 26 | E | A | -2.8749 | |
| 27 | F | A | 0.0000 | |
| 28 | I | A | 0.0000 | |
| 29 | K | A | -3.8509 | |
| 30 | K | A | -3.1770 | |
| 31 | G | A | 0.0000 | |
| 32 | K | A | -3.3520 | |
| 33 | E | A | -3.6119 | |
| 34 | A | A | -2.7201 | |
| 35 | V | A | 0.0000 | |
| 36 | E | A | -3.9990 | |
| 37 | S | A | -3.6321 | |
| 38 | E | A | -4.1864 | |
| 39 | E | A | -3.6729 | |
| 40 | M | A | 0.0000 | |
| 41 | K | A | -4.2660 | |
| 42 | K | A | -3.2475 | |
| 43 | L | A | -1.0748 | |
| 44 | M | A | 0.0000 | |
| 45 | P | A | -2.4357 | |
| 46 | E | A | -3.9624 | |
| 47 | E | A | -3.8007 | |
| 48 | E | A | 0.0000 | |
| 49 | R | A | -3.6040 | |
| 50 | E | A | -4.3942 | |
| 51 | K | A | -3.8436 | |
| 52 | V | A | 0.0000 | |
| 53 | L | A | -3.0154 | |
| 54 | K | A | -3.5034 | |
| 55 | A | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | E | A | -3.7259 | |
| 58 | N | A | -2.8297 | |
| 59 | I | A | 0.0000 | |
| 60 | E | A | -3.7712 | |
| 61 | K | A | -3.4697 | |
| 62 | L | A | 0.0000 | |
| 63 | V | A | -2.0167 | |
| 64 | S | A | -2.1563 | |
| 65 | K | A | -2.7524 | |
| 66 | N | A | -2.1214 | |
| 67 | T | A | -1.7715 | |
| 68 | K | A | -2.1932 | |
| 69 | A | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | K | A | -1.5782 | |
| 72 | I | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | L | A | 0.0000 | |
| 75 | K | A | -1.0628 | |
| 76 | I | A | -0.5968 | |
| 77 | I | A | 0.0000 | |
| 78 | Y | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | N | A | -2.2060 | |
| 81 | I | A | -1.9099 | |
| 82 | K | A | -2.4507 | |
| 83 | D | A | -3.4484 | |
| 84 | E | A | -2.8294 | |
| 85 | T | A | -1.9959 | |
| 86 | A | A | -2.7894 | |
| 87 | S | A | -2.7258 | |
| 88 | E | A | -4.0562 | |
| 89 | E | A | -4.3607 | |
| 90 | E | A | -4.3853 | |
| 91 | K | A | -5.3141 | |
| 92 | E | A | -5.5845 | |
| 93 | K | A | -5.2351 | |
| 94 | L | A | 0.0000 | |
| 95 | D | A | -5.1061 | |
| 96 | R | A | -4.9642 | |
| 97 | E | A | -3.8197 | |
| 98 | W | A | -2.9453 | |
| 99 | H | A | -2.9328 | |
| 100 | E | A | -3.0370 | |
| 101 | L | A | 0.0000 | |
| 102 | V | A | -0.1918 | |
| 103 | M | A | -0.3646 | |
| 104 | E | A | -1.1304 | |
| 105 | Y | A | -0.2984 | |
| 106 | M | A | 0.5192 | |
| 107 | S | A | -0.2037 | |
| 108 | L | A | 0.0000 | |
| 109 | S | A | -2.0574 | |
| 110 | E | A | -3.5532 | |
| 111 | E | A | -3.8946 | |
| 112 | D | A | -3.5548 | |
| 113 | R | A | -3.4487 | |
| 114 | E | A | -4.1732 | |
| 115 | E | A | -3.3288 | |
| 116 | F | A | 0.0000 | |
| 117 | H | A | -2.8105 | |
| 118 | E | A | -2.8374 | |
| 119 | L | A | 0.0000 | |
| 120 | N | A | -1.7626 | |
| 121 | H | A | -2.0105 | |
| 122 | N | A | 0.0000 | |
| 123 | M | A | 0.0000 | |
| 124 | H | A | -1.7422 | |
| 125 | I | A | -1.3889 | |
| 126 | V | A | 0.0000 | |
| 127 | F | A | -1.7168 | |
| 128 | E | A | -2.9531 | |
| 129 | A | A | 0.0000 | |
| 130 | I | A | 0.0000 | |
| 131 | E | A | -3.3141 | |
| 132 | R | A | -3.1313 | |
| 133 | Y | A | -1.3550 | |
| 134 | P | A | -1.0305 | |
| 135 | I | A | -0.1141 | |
| 136 | L | A | 0.0000 | |
| 137 | K | A | -1.5988 | |
| 138 | P | A | -1.2579 | |
| 139 | V | A | 0.0000 | |
| 140 | L | A | -1.6032 | |
| 141 | E | A | -2.6715 | |
| 142 | I | A | -1.8990 | |
| 143 | L | A | 0.0000 | |
| 144 | K | A | -2.6234 | |
| 145 | N | A | -2.4277 | |
| 146 | S | A | -1.7836 |