| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPDAPPPSPLYVRPPPWSPYWKRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQISTPEINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9461 | |
| 2 | L | A | 1.9717 | |
| 3 | P | A | 0.8309 | |
| 4 | P | A | 0.3811 | |
| 5 | T | A | 0.1172 | |
| 6 | T | A | 0.1335 | |
| 7 | P | A | 0.1636 | |
| 8 | V | A | 1.1861 | |
| 9 | A | A | 0.0218 | |
| 10 | K | A | -1.1497 | |
| 11 | V | A | -0.3978 | |
| 12 | Q | A | -1.5255 | |
| 13 | S | A | -1.5964 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4073 | |
| 16 | E | A | -2.4332 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4620 | |
| 20 | P | A | 0.1107 | |
| 21 | T | A | 0.1162 | |
| 22 | S | A | -0.1710 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1110 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2761 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8769 | |
| 31 | R | A | -2.6524 | |
| 32 | L | A | -0.7822 | |
| 33 | L | A | 1.2149 | |
| 34 | T | A | 1.4655 | |
| 35 | V | A | 2.0080 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1969 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6145 | |
| 40 | K | A | -1.6301 | |
| 41 | D | A | -0.9190 | |
| 42 | I | A | 0.8311 | |
| 43 | V | A | 1.0177 | |
| 44 | K | A | -1.1919 | |
| 45 | N | A | -1.9312 | |
| 46 | G | A | -1.2380 | |
| 47 | K | A | -0.9469 | |
| 48 | V | A | 1.5047 | |
| 49 | V | A | 2.0681 | |
| 50 | V | A | 1.3029 | |
| 51 | P | A | 0.4962 | |
| 52 | K | A | -0.6149 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1502 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4733 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2760 | |
| 70 | K | A | -1.8155 | |
| 71 | F | A | -0.6650 | |
| 72 | A | A | -0.5821 | |
| 73 | L | A | -0.8762 | |
| 74 | P | A | -1.2650 | |
| 75 | Q | A | -2.4765 | |
| 76 | K | A | -3.0949 | |
| 77 | D | A | -2.9922 | |
| 78 | F | A | -1.6430 | |
| 79 | Y | A | -1.9276 | |
| 80 | D | A | -2.7740 | |
| 81 | P | A | -2.3612 | |
| 82 | E | A | -3.0761 | |
| 83 | K | A | -3.4397 | |
| 84 | E | A | -2.5015 | |
| 85 | R | A | -1.3193 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6606 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9899 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3406 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6762 | |
| 99 | G | A | -0.5284 | |
| 100 | P | A | -0.3998 | |
| 101 | L | A | 0.0517 | |
| 102 | G | A | -0.2076 | |
| 103 | K | A | -0.6215 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4369 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1484 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4103 | |
| 110 | L | A | 0.2976 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1116 | |
| 113 | K | A | -0.4170 | |
| 114 | L | A | -1.2023 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5520 | |
| 117 | T | A | -1.3610 | |
| 118 | E | A | -2.5387 | |
| 119 | N | A | -2.5521 | |
| 120 | P | A | -2.1127 | |
| 121 | T | A | -1.6604 | |
| 122 | E | A | -2.2398 | |
| 123 | Y | A | -0.9503 | |
| 124 | Q | A | -1.6544 | |
| 125 | H | A | -2.2148 | |
| 126 | E | A | -2.2637 | |
| 127 | G | A | -2.0259 | |
| 128 | A | A | -1.4630 | |
| 129 | D | A | -2.3756 | |
| 130 | D | A | -1.9428 | |
| 131 | R | A | -1.1181 | |
| 132 | V | A | 0.2408 | |
| 133 | A | A | 0.4340 | |
| 134 | F | A | 0.2713 | |
| 135 | S | A | -0.0746 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6710 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.4941 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2245 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1368 | |
| 157 | D | A | 0.3068 | |
| 158 | L | A | 0.7717 | |
| 159 | A | A | 0.1618 | |
| 160 | E | A | -1.4459 | |
| 161 | P | A | -0.2032 | |
| 162 | C | A | 0.1938 | |
| 163 | P | A | -0.1655 | |
| 164 | G | A | -0.0719 | |
| 165 | L | A | 0.5936 | |
| 166 | P | A | -0.1131 | |
| 167 | P | A | -0.3397 | |
| 168 | G | A | -0.4202 | |
| 169 | A | A | -0.0227 | |
| 170 | C | A | 0.6719 | |
| 171 | P | A | 0.5331 | |
| 172 | P | A | 0.7894 | |
| 173 | I | A | 1.9970 | |
| 174 | Q | A | 0.8422 | |
| 175 | L | A | 1.4734 | |
| 176 | V | A | 0.8313 | |
| 177 | N | A | -0.3329 | |
| 178 | S | A | 0.0202 | |
| 179 | V | A | 0.4309 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3819 | |
| 182 | D | A | 0.0799 | |
| 183 | G | A | -0.1556 | |
| 184 | D | A | -0.5575 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1591 | |
| 190 | F | A | 0.0570 | |
| 191 | G | A | -0.1038 | |
| 192 | N | A | -0.2756 | |
| 193 | M | A | -0.1511 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4388 | |
| 197 | E | A | -2.6545 | |
| 198 | L | A | -1.2514 | |
| 199 | Q | A | -2.5631 | |
| 200 | Q | A | -3.3589 | |
| 201 | D | A | -3.6145 | |
| 202 | R | A | -3.3576 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1982 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3833 | |
| 211 | S | A | -1.9060 | |
| 212 | T | A | -1.4685 | |
| 213 | R | A | -2.1456 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1705 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3150 | |
| 220 | L | A | 0.5392 | |
| 221 | K | A | -1.2306 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9471 | |
| 224 | N | A | -1.6781 | |
| 225 | E | A | -1.3157 | |
| 226 | A | A | -0.6803 | |
| 227 | Y | A | -0.4644 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6764 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1381 | |
| 234 | F | A | 0.0352 | |
| 235 | G | A | -0.9152 | |
| 236 | R | A | -2.6514 | |
| 237 | R | A | -2.8802 | |
| 238 | E | A | -2.0519 | |
| 239 | Q | A | -0.0876 | |
| 240 | V | A | 1.5801 | |
| 241 | Y | A | 1.2550 | |
| 242 | A | A | 0.1829 | |
| 243 | R | A | -1.2822 | |
| 244 | H | A | -1.1395 | |
| 245 | F | A | -0.1624 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6276 | |
| 249 | S | A | -1.3415 | |
| 250 | G | A | -1.1094 | |
| 251 | P | A | -1.0815 | |
| 252 | D | A | -1.3546 | |
| 253 | G | A | -1.2746 | |
| 254 | H | A | -1.4672 | |
| 255 | P | A | -1.3361 | |
| 256 | L | A | -0.4034 | |
| 257 | P | A | -0.9048 | |
| 258 | D | A | -1.9504 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.9441 | |
| 261 | P | A | -0.6512 | |
| 262 | P | A | -0.1533 | |
| 263 | S | A | 0.0367 | |
| 264 | P | A | 0.6994 | |
| 265 | L | A | 1.5485 | |
| 266 | Y | A | 1.1598 | |
| 267 | V | A | 1.3008 | |
| 268 | R | A | -0.4703 | |
| 269 | P | A | -0.0193 | |
| 270 | P | A | 0.2458 | |
| 271 | P | A | 0.1079 | |
| 272 | W | A | 1.0540 | |
| 273 | S | A | 0.4846 | |
| 274 | P | A | 0.1161 | |
| 275 | Y | A | 0.4064 | |
| 276 | W | A | -0.1574 | |
| 277 | K | A | -1.4797 | |
| 278 | R | A | -1.1007 | |
| 279 | P | A | -1.1549 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5874 | |
| 282 | D | A | -0.9254 | |
| 283 | Y | A | 0.8491 | |
| 284 | F | A | 0.7068 | |
| 285 | G | A | 0.1451 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9413 | |
| 291 | L | A | 1.6271 | |
| 292 | V | A | 0.6341 | |
| 293 | S | A | -0.1518 | |
| 294 | S | A | -0.9620 | |
| 295 | D | A | -1.8435 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1576 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6864 | |
| 301 | R | A | -1.9754 | |
| 302 | P | A | -1.0061 | |
| 303 | F | A | -0.2014 | |
| 304 | W | A | -0.5254 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0839 | |
| 307 | R | A | -2.9238 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7831 | |
| 310 | G | A | -1.4250 | |
| 311 | N | A | -1.3865 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8349 | |
| 319 | N | A | -0.8490 | |
| 320 | E | A | -1.0236 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3261 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1434 | |
| 333 | N | A | 0.4231 | |
| 334 | F | A | 1.4581 | |
| 335 | T | A | 0.6565 | |
| 336 | I | A | 0.3958 | |
| 337 | S | A | -0.9285 | |
| 338 | Q | A | -1.5814 | |
| 339 | Q | A | -1.1273 | |
| 340 | I | A | 0.7255 | |
| 341 | S | A | 0.1169 | |
| 342 | T | A | -0.3926 | |
| 343 | P | A | -1.0762 | |
| 344 | E | A | -1.8921 | |
| 345 | I | A | -0.4462 | |
| 346 | N | A | -0.4754 | |
| 347 | V | A | 1.4728 | |
| 348 | Y | A | 1.5057 | |
| 349 | D | A | -0.0738 | |
| 350 | P | A | -0.7360 | |
| 351 | S | A | -0.5336 | |
| 352 | N | A | -0.2125 | |
| 353 | F | A | -0.8693 | |
| 354 | K | A | -1.9080 | |
| 355 | N | A | -1.7382 | |
| 356 | Y | A | 0.0120 | |
| 357 | L | A | 0.6526 | |
| 358 | R | A | 0.9404 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4675 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0161 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9432 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6654 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2774 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3156 | |
| 376 | L | A | -1.7420 | |
| 377 | D | A | -2.0027 | |
| 378 | P | A | -1.0482 | |
| 379 | G | A | -1.0112 | |
| 380 | V | A | -0.9207 | |
| 381 | L | A | -0.5287 | |
| 382 | A | A | -0.6516 | |
| 383 | H | A | -0.8426 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3914 | |
| 386 | T | A | -0.5650 | |
| 387 | M | A | -0.3283 | |
| 388 | N | A | -0.8584 | |
| 389 | P | A | -1.2685 | |
| 390 | T | A | -1.5331 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5259 | |
| 393 | E | A | -2.9462 | |
| 394 | N | A | -2.6850 | |
| 395 | W | A | -1.5310 | |
| 396 | N | A | -1.3622 | |
| 397 | L | A | -0.2392 | |
| 398 | G | A | 0.5347 | |
| 399 | F | A | 2.4271 | |
| 400 | V | A | 1.8568 | |
| 401 | P | A | 0.0571 | |
| 402 | P | A | -1.8797 | |
| 403 | K | A | -3.5412 | |
| 404 | E | A | -3.9064 | |
| 405 | R | A | -4.2414 | |
| 406 | E | A | -3.9083 | |
| 407 | D | A | -2.9185 | |
| 408 | P | A | -1.7951 | |
| 409 | Y | A | -0.9916 | |
| 410 | K | A | -2.1025 | |
| 411 | G | A | -0.6432 | |
| 412 | L | A | 0.6572 | |
| 413 | I | A | 1.5752 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4097 | |
| 416 | E | A | -1.6980 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9496 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0693 | |
| 421 | E | A | -2.7857 | |
| 422 | R | A | -2.6370 | |
| 423 | F | A | -1.2931 | |
| 424 | S | A | -1.4673 | |
| 425 | Q | A | -1.9184 | |
| 426 | D | A | -2.9026 | |
| 427 | L | A | -1.9963 | |
| 428 | D | A | -2.7895 | |
| 429 | Q | A | -2.6210 | |
| 430 | F | A | -1.4365 | |
| 431 | A | A | -0.8897 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5434 | |
| 435 | K | A | -0.6954 | |
| 436 | F | A | 0.1696 | |
| 437 | L | A | 1.0492 | |
| 438 | Y | A | 0.8450 | |
| 439 | Q | A | -0.2540 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine