| Chain sequence(s) |
A: IKCNCKRAVIKPAICRKICGKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 0.9417 | |
| 2 | K | A | -0.9058 | |
| 3 | C | A | -0.7003 | |
| 4 | N | A | -1.6209 | |
| 5 | C | A | -1.2610 | |
| 6 | K | A | -2.2311 | |
| 7 | R | A | -2.4072 | |
| 8 | A | A | -0.5969 | |
| 9 | V | A | 0.8429 | |
| 10 | I | A | 0.0705 | |
| 11 | K | A | -1.4385 | |
| 12 | P | A | -1.5289 | |
| 13 | A | A | -0.7926 | |
| 14 | I | A | 0.0231 | |
| 15 | C | A | 0.0000 | |
| 16 | R | A | -2.3196 | |
| 17 | K | A | -1.9610 | |
| 18 | I | A | 0.1453 | |
| 19 | C | A | -0.8781 | |
| 20 | G | A | -2.1081 | |
| 21 | K | A | -2.6563 | |
| 22 | N | A | -2.0674 |