Project name: be7e3c19039560d

Status: done

Started: 2026-02-08 09:21:02
Settings
Chain sequence(s) L: CGGTAAVPFFPGVGVS
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-0.3706
Maximal score value
2.2556
Average score
0.6183
Total score value
9.8932

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
253 C L 0.6398
254 G L -0.3706
255 G L -0.3591
256 T L 0.0248
257 A L 0.0669
258 A L 0.1890
259 V L 0.6327
260 P L 0.2066
261 F L 2.2556
262 F L 2.2536
263 P L 0.0910
264 G L 0.1646
265 V L 1.6475
266 G L 0.4014
267 V L 1.6487
268 S L 0.4007
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Laboratory of Theory of Biopolymers 2018