Project name: query_structure

Status: done

Started: 2026-03-16 20:42:41
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Chain sequence(s) A: MAGPLRAPLLLLAILAVALAVSPAAGASPGKPPRLVGGPMDASVEEEGVRRALDFAVSEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHEQPHLKRKAFCSFQIYTVPWQGTMTLSKSTCQDA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:39)
Show buried residues

Minimal score value
-4.0741
Maximal score value
5.0725
Average score
-0.3215
Total score value
-46.9336

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9284
2 A A 0.5147
3 G A -0.1350
4 P A -0.1761
5 L A 0.7532
6 R A -0.4350
7 A A 0.7009
8 P A 1.4659
9 L A 2.7092
10 L A 3.2653
11 L A 3.9640
12 L A 4.4466
13 A A 4.0292
14 I A 5.0725
15 L A 4.7161
16 A A 3.7976
17 V A 4.1596
18 A A 3.4408
19 L A 3.3127
20 A A 2.4046
21 V A 2.5519
22 S A 1.2421
23 P A 0.3164
24 A A 0.0298
25 A A -0.2783
26 G A -0.5426
27 A A -0.4162
28 S A -0.8547
29 P A -1.1331
30 G A -1.5402
31 K A -2.5186
32 P A -1.6326
33 P A -1.1467
34 R A -1.1497
35 L A 1.3230
36 V A 2.0708
37 G A 1.4227
38 G A 0.7809
39 P A -0.1842
40 M A -0.8256
41 D A -2.1496
42 A A -1.5221
43 S A -1.5146
44 V A -1.2305
45 E A -2.5429
46 E A -2.7409
47 E A -3.5255
48 G A -2.6845
49 V A 0.0000
50 R A -4.0741
51 R A -3.7406
52 A A 0.0000
53 L A -1.8901
54 D A -2.7243
55 F A -1.2018
56 A A 0.0000
57 V A -0.9368
58 S A -1.0165
59 E A -1.1234
60 Y A -0.8906
61 N A 0.0000
62 K A -2.1696
63 A A -1.2163
64 S A -1.1291
65 N A -1.4945
66 D A -0.7252
67 M A 0.4154
68 Y A -0.0215
69 H A -0.5928
70 S A 0.0000
71 R A -1.0172
72 A A -0.4207
73 L A 0.2633
74 Q A -0.2942
75 V A 0.4665
76 V A 0.9573
77 R A -0.8495
78 A A 0.0000
79 R A -1.6071
80 K A -0.5505
81 Q A 0.6700
82 I A 2.3661
83 V A 1.8772
84 A A 0.9959
85 G A 0.0000
86 V A 1.0851
87 N A 0.4920
88 Y A 0.0000
89 F A -0.7340
90 L A 0.0000
91 D A 0.0000
92 V A 0.0000
93 E A -0.2677
94 L A 0.0000
95 G A 0.0000
96 R A -1.0991
97 T A 0.0000
98 T A -0.2316
99 C A 0.0000
100 T A -0.4310
101 K A -1.1695
102 T A -0.9957
103 Q A -1.7460
104 P A -1.6876
105 N A -2.3050
106 L A -2.0721
107 D A -2.7628
108 N A -2.3054
109 C A -1.3917
110 P A -0.7580
111 F A -0.5952
112 H A -1.8331
113 E A -2.9567
114 Q A -2.7444
115 P A -2.3054
116 H A -2.1551
117 L A -1.9907
118 K A -3.2317
119 R A -2.8263
120 K A -2.1012
121 A A 0.0000
122 F A -0.0269
123 C A 0.0000
124 S A -0.3340
125 F A 0.0000
126 Q A -0.7822
127 I A 0.0000
128 Y A 0.4351
129 T A 0.0000
130 V A 0.0000
131 P A -0.1445
132 W A 0.3221
133 Q A -0.8935
134 G A -0.7230
135 T A -0.3309
136 M A -0.0529
137 T A 0.0517
138 L A -0.2383
139 S A -0.8175
140 K A -1.6519
141 S A -0.9861
142 T A -0.5218
143 C A -0.4926
144 Q A -1.7970
145 D A -2.4609
146 A A -1.2336
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Laboratory of Theory of Biopolymers 2018