| Chain sequence(s) |
A: MAGPLRAPLLLLAILAVALAVSPAAGASPGKPPRLVGGPMDASVEEEGVRRALDFAVSEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHEQPHLKRKAFCSFQIYTVPWQGTMTLSKSTCQDA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9284 | |
| 2 | A | A | 0.5147 | |
| 3 | G | A | -0.1350 | |
| 4 | P | A | -0.1761 | |
| 5 | L | A | 0.7532 | |
| 6 | R | A | -0.4350 | |
| 7 | A | A | 0.7009 | |
| 8 | P | A | 1.4659 | |
| 9 | L | A | 2.7092 | |
| 10 | L | A | 3.2653 | |
| 11 | L | A | 3.9640 | |
| 12 | L | A | 4.4466 | |
| 13 | A | A | 4.0292 | |
| 14 | I | A | 5.0725 | |
| 15 | L | A | 4.7161 | |
| 16 | A | A | 3.7976 | |
| 17 | V | A | 4.1596 | |
| 18 | A | A | 3.4408 | |
| 19 | L | A | 3.3127 | |
| 20 | A | A | 2.4046 | |
| 21 | V | A | 2.5519 | |
| 22 | S | A | 1.2421 | |
| 23 | P | A | 0.3164 | |
| 24 | A | A | 0.0298 | |
| 25 | A | A | -0.2783 | |
| 26 | G | A | -0.5426 | |
| 27 | A | A | -0.4162 | |
| 28 | S | A | -0.8547 | |
| 29 | P | A | -1.1331 | |
| 30 | G | A | -1.5402 | |
| 31 | K | A | -2.5186 | |
| 32 | P | A | -1.6326 | |
| 33 | P | A | -1.1467 | |
| 34 | R | A | -1.1497 | |
| 35 | L | A | 1.3230 | |
| 36 | V | A | 2.0708 | |
| 37 | G | A | 1.4227 | |
| 38 | G | A | 0.7809 | |
| 39 | P | A | -0.1842 | |
| 40 | M | A | -0.8256 | |
| 41 | D | A | -2.1496 | |
| 42 | A | A | -1.5221 | |
| 43 | S | A | -1.5146 | |
| 44 | V | A | -1.2305 | |
| 45 | E | A | -2.5429 | |
| 46 | E | A | -2.7409 | |
| 47 | E | A | -3.5255 | |
| 48 | G | A | -2.6845 | |
| 49 | V | A | 0.0000 | |
| 50 | R | A | -4.0741 | |
| 51 | R | A | -3.7406 | |
| 52 | A | A | 0.0000 | |
| 53 | L | A | -1.8901 | |
| 54 | D | A | -2.7243 | |
| 55 | F | A | -1.2018 | |
| 56 | A | A | 0.0000 | |
| 57 | V | A | -0.9368 | |
| 58 | S | A | -1.0165 | |
| 59 | E | A | -1.1234 | |
| 60 | Y | A | -0.8906 | |
| 61 | N | A | 0.0000 | |
| 62 | K | A | -2.1696 | |
| 63 | A | A | -1.2163 | |
| 64 | S | A | -1.1291 | |
| 65 | N | A | -1.4945 | |
| 66 | D | A | -0.7252 | |
| 67 | M | A | 0.4154 | |
| 68 | Y | A | -0.0215 | |
| 69 | H | A | -0.5928 | |
| 70 | S | A | 0.0000 | |
| 71 | R | A | -1.0172 | |
| 72 | A | A | -0.4207 | |
| 73 | L | A | 0.2633 | |
| 74 | Q | A | -0.2942 | |
| 75 | V | A | 0.4665 | |
| 76 | V | A | 0.9573 | |
| 77 | R | A | -0.8495 | |
| 78 | A | A | 0.0000 | |
| 79 | R | A | -1.6071 | |
| 80 | K | A | -0.5505 | |
| 81 | Q | A | 0.6700 | |
| 82 | I | A | 2.3661 | |
| 83 | V | A | 1.8772 | |
| 84 | A | A | 0.9959 | |
| 85 | G | A | 0.0000 | |
| 86 | V | A | 1.0851 | |
| 87 | N | A | 0.4920 | |
| 88 | Y | A | 0.0000 | |
| 89 | F | A | -0.7340 | |
| 90 | L | A | 0.0000 | |
| 91 | D | A | 0.0000 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -0.2677 | |
| 94 | L | A | 0.0000 | |
| 95 | G | A | 0.0000 | |
| 96 | R | A | -1.0991 | |
| 97 | T | A | 0.0000 | |
| 98 | T | A | -0.2316 | |
| 99 | C | A | 0.0000 | |
| 100 | T | A | -0.4310 | |
| 101 | K | A | -1.1695 | |
| 102 | T | A | -0.9957 | |
| 103 | Q | A | -1.7460 | |
| 104 | P | A | -1.6876 | |
| 105 | N | A | -2.3050 | |
| 106 | L | A | -2.0721 | |
| 107 | D | A | -2.7628 | |
| 108 | N | A | -2.3054 | |
| 109 | C | A | -1.3917 | |
| 110 | P | A | -0.7580 | |
| 111 | F | A | -0.5952 | |
| 112 | H | A | -1.8331 | |
| 113 | E | A | -2.9567 | |
| 114 | Q | A | -2.7444 | |
| 115 | P | A | -2.3054 | |
| 116 | H | A | -2.1551 | |
| 117 | L | A | -1.9907 | |
| 118 | K | A | -3.2317 | |
| 119 | R | A | -2.8263 | |
| 120 | K | A | -2.1012 | |
| 121 | A | A | 0.0000 | |
| 122 | F | A | -0.0269 | |
| 123 | C | A | 0.0000 | |
| 124 | S | A | -0.3340 | |
| 125 | F | A | 0.0000 | |
| 126 | Q | A | -0.7822 | |
| 127 | I | A | 0.0000 | |
| 128 | Y | A | 0.4351 | |
| 129 | T | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | P | A | -0.1445 | |
| 132 | W | A | 0.3221 | |
| 133 | Q | A | -0.8935 | |
| 134 | G | A | -0.7230 | |
| 135 | T | A | -0.3309 | |
| 136 | M | A | -0.0529 | |
| 137 | T | A | 0.0517 | |
| 138 | L | A | -0.2383 | |
| 139 | S | A | -0.8175 | |
| 140 | K | A | -1.6519 | |
| 141 | S | A | -0.9861 | |
| 142 | T | A | -0.5218 | |
| 143 | C | A | -0.4926 | |
| 144 | Q | A | -1.7970 | |
| 145 | D | A | -2.4609 | |
| 146 | A | A | -1.2336 |