| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCGPDDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRCGPEGHPLPRDPPPSPLYVPPPPDSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9459 | |
| 2 | L | A | 1.9689 | |
| 3 | P | A | 0.6587 | |
| 4 | P | A | 0.3578 | |
| 5 | T | A | 0.1124 | |
| 6 | T | A | 0.1244 | |
| 7 | P | A | 0.1708 | |
| 8 | V | A | 1.2218 | |
| 9 | A | A | 0.0245 | |
| 10 | K | A | -1.1628 | |
| 11 | V | A | -0.4074 | |
| 12 | Q | A | -1.5310 | |
| 13 | S | A | -1.6126 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4531 | |
| 16 | E | A | -2.4556 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4544 | |
| 20 | P | A | 0.1034 | |
| 21 | T | A | 0.1164 | |
| 22 | S | A | -0.1707 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1057 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1856 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7805 | |
| 31 | R | A | -2.6465 | |
| 32 | L | A | -0.7755 | |
| 33 | L | A | 1.2154 | |
| 34 | T | A | 1.4626 | |
| 35 | V | A | 1.9982 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1911 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6236 | |
| 40 | K | A | -1.6428 | |
| 41 | D | A | -0.9395 | |
| 42 | I | A | 0.8274 | |
| 43 | V | A | 1.0115 | |
| 44 | K | A | -1.1907 | |
| 45 | N | A | -1.9282 | |
| 46 | G | A | -1.2298 | |
| 47 | K | A | -0.9472 | |
| 48 | V | A | 1.5011 | |
| 49 | V | A | 2.0664 | |
| 50 | V | A | 1.3005 | |
| 51 | P | A | 0.4839 | |
| 52 | K | A | -0.6204 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1197 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4897 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2708 | |
| 70 | K | A | -1.8153 | |
| 71 | F | A | -0.6710 | |
| 72 | A | A | -0.5702 | |
| 73 | L | A | -0.8573 | |
| 74 | P | A | -1.2618 | |
| 75 | Q | A | -2.4746 | |
| 76 | K | A | -3.0926 | |
| 77 | D | A | -2.9938 | |
| 78 | F | A | -1.6456 | |
| 79 | Y | A | -1.9252 | |
| 80 | D | A | -2.7718 | |
| 81 | P | A | -2.3606 | |
| 82 | E | A | -3.0765 | |
| 83 | K | A | -3.4439 | |
| 84 | E | A | -2.5111 | |
| 85 | R | A | -1.3221 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6489 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9717 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3952 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6857 | |
| 99 | G | A | -0.5363 | |
| 100 | P | A | -0.4142 | |
| 101 | L | A | 0.0232 | |
| 102 | G | A | -0.2574 | |
| 103 | K | A | -0.7279 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4576 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1526 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4153 | |
| 110 | L | A | 0.2454 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1869 | |
| 113 | K | A | -0.5657 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0293 | |
| 116 | D | A | -1.5137 | |
| 117 | T | A | -1.3839 | |
| 118 | E | A | -2.7651 | |
| 119 | N | A | -2.4407 | |
| 120 | P | A | -1.5441 | |
| 121 | T | A | -0.7520 | |
| 122 | A | A | -0.3075 | |
| 123 | P | A | 0.0285 | |
| 124 | V | A | 0.1870 | |
| 125 | H | A | -0.3367 | |
| 126 | C | A | -0.7093 | |
| 127 | G | A | -1.1073 | |
| 128 | P | A | -1.4530 | |
| 129 | D | A | -2.2737 | |
| 130 | D | A | -1.8071 | |
| 131 | R | A | -1.1895 | |
| 132 | V | A | 0.1674 | |
| 133 | A | A | 0.4376 | |
| 134 | F | A | 0.2906 | |
| 135 | S | A | -0.0601 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7043 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2491 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5646 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2192 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1423 | |
| 157 | D | A | 0.3075 | |
| 158 | L | A | 0.7527 | |
| 159 | A | A | 0.1391 | |
| 160 | E | A | -1.4564 | |
| 161 | P | A | -0.2006 | |
| 162 | C | A | 0.2000 | |
| 163 | P | A | -0.1565 | |
| 164 | G | A | -0.0563 | |
| 165 | L | A | 0.6216 | |
| 166 | P | A | -0.0994 | |
| 167 | P | A | -0.3336 | |
| 168 | G | A | -0.4169 | |
| 169 | A | A | -0.0160 | |
| 170 | C | A | 0.6749 | |
| 171 | P | A | 0.5245 | |
| 172 | P | A | 0.7625 | |
| 173 | I | A | 1.9349 | |
| 174 | Q | A | 0.8189 | |
| 175 | L | A | 1.4810 | |
| 176 | V | A | 0.8388 | |
| 177 | N | A | -0.3207 | |
| 178 | S | A | 0.0248 | |
| 179 | V | A | 0.4134 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3690 | |
| 182 | D | A | 0.0765 | |
| 183 | G | A | -0.1652 | |
| 184 | D | A | -0.5575 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4715 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0781 | |
| 190 | F | A | 0.0227 | |
| 191 | G | A | -0.1568 | |
| 192 | N | A | -0.3063 | |
| 193 | M | A | -0.1360 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3825 | |
| 197 | E | A | -2.5972 | |
| 198 | L | A | -1.2274 | |
| 199 | Q | A | -2.5431 | |
| 200 | Q | A | -3.3315 | |
| 201 | D | A | -3.6008 | |
| 202 | R | A | -3.3411 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1885 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3625 | |
| 211 | S | A | -1.8721 | |
| 212 | T | A | -1.4126 | |
| 213 | R | A | -2.0585 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2038 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3023 | |
| 220 | L | A | 0.5144 | |
| 221 | K | A | -1.2837 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9595 | |
| 224 | N | A | -1.6943 | |
| 225 | E | A | -1.3298 | |
| 226 | A | A | -0.6793 | |
| 227 | Y | A | -0.4534 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7030 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1394 | |
| 234 | F | A | 0.0287 | |
| 235 | G | A | -0.9342 | |
| 236 | R | A | -2.6922 | |
| 237 | R | A | -2.9905 | |
| 238 | E | A | -2.1748 | |
| 239 | Q | A | -0.2159 | |
| 240 | V | A | 1.4889 | |
| 241 | Y | A | 1.2247 | |
| 242 | A | A | 0.1650 | |
| 243 | R | A | -1.3122 | |
| 244 | H | A | -1.2253 | |
| 245 | F | A | -0.3459 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | -0.3959 | |
| 248 | R | A | -0.7079 | |
| 249 | C | A | -0.9286 | |
| 250 | G | A | -0.9250 | |
| 251 | P | A | -0.8756 | |
| 252 | E | A | -1.3667 | |
| 253 | G | A | -1.2918 | |
| 254 | H | A | -1.4936 | |
| 255 | P | A | -1.3304 | |
| 256 | L | A | -0.6328 | |
| 257 | P | A | -1.4842 | |
| 258 | R | A | -2.5497 | |
| 259 | D | A | -2.9686 | |
| 260 | P | A | -2.0409 | |
| 261 | P | A | -1.1495 | |
| 262 | P | A | -0.5438 | |
| 263 | S | A | -0.3233 | |
| 264 | P | A | 0.4931 | |
| 265 | L | A | 1.6354 | |
| 266 | Y | A | 1.4688 | |
| 267 | V | A | 1.7005 | |
| 268 | P | A | 0.7036 | |
| 269 | P | A | 0.2541 | |
| 270 | P | A | -0.7074 | |
| 271 | P | A | -0.9557 | |
| 272 | D | A | -1.9242 | |
| 273 | S | A | -0.6508 | |
| 274 | P | A | -0.0597 | |
| 275 | Y | A | 0.9236 | |
| 276 | A | A | 0.5998 | |
| 277 | V | A | 1.8315 | |
| 278 | P | A | 0.9340 | |
| 279 | P | A | 0.2049 | |
| 280 | P | A | -0.4659 | |
| 281 | T | A | -0.4849 | |
| 282 | D | A | -1.0311 | |
| 283 | Y | A | 0.7174 | |
| 284 | F | A | 0.6212 | |
| 285 | G | A | 0.0855 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9029 | |
| 291 | L | A | 1.6008 | |
| 292 | V | A | 0.6118 | |
| 293 | S | A | -0.1561 | |
| 294 | S | A | -0.9701 | |
| 295 | D | A | -1.8443 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1447 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6298 | |
| 301 | R | A | -1.8538 | |
| 302 | P | A | -0.9510 | |
| 303 | F | A | -0.1758 | |
| 304 | W | A | -0.5190 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0798 | |
| 307 | R | A | -2.9251 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7801 | |
| 310 | G | A | -1.4145 | |
| 311 | N | A | -1.3960 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9575 | |
| 319 | N | A | -0.8983 | |
| 320 | E | A | -1.0592 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3540 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1668 | |
| 333 | N | A | 0.4327 | |
| 334 | F | A | 1.4965 | |
| 335 | T | A | 0.7990 | |
| 336 | I | A | 0.3869 | |
| 337 | S | A | -1.0003 | |
| 338 | Q | A | -1.6953 | |
| 339 | Q | A | -1.0485 | |
| 340 | L | A | 0.1938 | |
| 341 | S | A | -0.1111 | |
| 342 | T | A | -0.3695 | |
| 343 | P | A | -0.9861 | |
| 344 | E | A | -1.6017 | |
| 345 | I | A | 0.0505 | |
| 346 | N | A | -0.2942 | |
| 347 | V | A | 1.6533 | |
| 348 | Y | A | 1.5988 | |
| 349 | D | A | -0.0366 | |
| 350 | P | A | -0.7840 | |
| 351 | S | A | -0.7025 | |
| 352 | N | A | -0.7143 | |
| 353 | F | A | -1.1791 | |
| 354 | K | A | -2.0936 | |
| 355 | N | A | -1.7291 | |
| 356 | Y | A | 0.0396 | |
| 357 | L | A | 0.6802 | |
| 358 | R | A | 0.9597 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4720 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0244 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0041 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6959 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2783 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3246 | |
| 376 | L | A | -1.7518 | |
| 377 | D | A | -2.0093 | |
| 378 | P | A | -1.0522 | |
| 379 | G | A | -1.0154 | |
| 380 | V | A | -0.9275 | |
| 381 | L | A | -0.5411 | |
| 382 | A | A | -0.6605 | |
| 383 | H | A | -0.8499 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4074 | |
| 386 | T | A | -0.5799 | |
| 387 | M | A | -0.3333 | |
| 388 | N | A | -0.8688 | |
| 389 | P | A | -1.2918 | |
| 390 | T | A | -1.6132 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5786 | |
| 393 | E | A | -3.0121 | |
| 394 | N | A | -2.8280 | |
| 395 | W | A | -1.5923 | |
| 396 | N | A | -1.2400 | |
| 397 | L | A | -0.2379 | |
| 398 | G | A | 0.5166 | |
| 399 | F | A | 2.4198 | |
| 400 | V | A | 1.8432 | |
| 401 | P | A | 0.0575 | |
| 402 | P | A | -1.9841 | |
| 403 | K | A | -3.5303 | |
| 404 | E | A | -4.0563 | |
| 405 | R | A | -4.5488 | |
| 406 | E | A | -4.0556 | |
| 407 | D | A | -2.9880 | |
| 408 | P | A | -1.8321 | |
| 409 | Y | A | -0.9843 | |
| 410 | K | A | -2.0986 | |
| 411 | G | A | -0.6373 | |
| 412 | L | A | 0.6601 | |
| 413 | I | A | 1.5805 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3882 | |
| 416 | E | A | -1.6456 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8341 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8841 | |
| 421 | E | A | -2.4878 | |
| 422 | R | A | -2.0534 | |
| 423 | F | A | -1.0179 | |
| 424 | S | A | -1.3271 | |
| 425 | Q | A | -1.8577 | |
| 426 | D | A | -2.8892 | |
| 427 | L | A | -1.9813 | |
| 428 | D | A | -2.7497 | |
| 429 | Q | A | -2.6019 | |
| 430 | F | A | -1.4391 | |
| 431 | A | A | -0.8914 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5367 | |
| 435 | K | A | -0.7038 | |
| 436 | F | A | 0.1622 | |
| 437 | L | A | 1.0470 | |
| 438 | Y | A | 0.8386 | |
| 439 | Q | A | -0.2622 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine